cluster # 2735

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Anopheles gambiae
cluster # 2735 cluster # 2735 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_2735#0 length = 599 sequences # 1

consensus_2735#1 length = 396 sequences # 1

consensusID : consensus_2735#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 599
fasta sequence

                              [TCTTCAGCTGGGGCATTATGAACACGGCCTACGAGCAGCTGAAAAAGGGGTTCTATTAAGGGGTCGGTGGTGGTGGTGGCCCCATGAGTCAAAGGCCCCCGGGAGTATAGAAGGGCCGGTATTATAGTACGTTTGTAAATAGATTGATCGTTTAGGAAGGGCGTTACACAAGCGGTCTGCACAACTTTGGCACGCACGCAGTCACTGAGGGCGGATGGAACGGACGGTGTGGCCACATCTCTCCTGCCATCTCTTTTATTTAGGTTAGCTTTGCCGGCATTAGCCAGACAAGGCAAACGAGCATGAGATTTAAGTATACCCCATCAATCGTGTGTGCGTTTGTGTGTGTGTGTGCTATACCTTCTCTCCTCATTTTGCATTTAATGCGCTCCTCATCCTGGATGCTCCGTGTACAGATGAAACTGCTGTTTTCATCGCTTTAAGTGCTTAAAGTATTCATCTCACCTCGTGTTGTTGGTTCTCGCCCGTTTGTAAATATATATATCGATATGTATATACTTGTCCGCATCCCGCACACAGTTCACTGTAGGGCAATACATAGCCCTACACGGCCCAGAAGCCCCCCCCCCCCTACTCCT]

[+] EMBL BX608421             [TCTTCAGCTGGGGCATTATGAACACGGCCTACGAGCAGCTGAAAAAGGGGTTCTATTAAGGGGTCGGTGGTGGTGGTGGCCCCATGAGTCAAAGGCCCCCGGGAGTATAGAAGGGCCGGTATTATAGTACGTTTGTAAATAGATTGATCGTTTAGGAAGGGCGTTACACAAGCGGTCTGCACAACTTTGGCACGCACGCAGTCACTGAGGGCGGATGGAACGGACGGTGTGGCCACATCTCTCCTGCCATCTCTTTTATTTAGGTTAGCTTTGCCGGCATTAGCCAGACAAGGCAAACGAGCATGAGATTTAAGTATACCCCATCAATCGTGTGTGCGTTTGTGTGTGTGTGTGCTATACCTTCTCTCCTCATTTTGCATTTAATGCGCTCCTCATCCTGGATGCTCCGTGTACAGATGAAACTGCTGTTTTCATCGCTTTAAGTGCTTAAAGTATTCATCTCACCTCGTGTTGTTGGTTCTCGCCCGTTTGTAAATATATATATCGATATGTATATACTTGTCCGCATCCCGCACACAGTTCACTGTAGGGCAATACATAGCCCTACACGGCCCAGAAGCCCCCCCCCCCCTACTCCT]




>consensus_2735#0
TCTTCAGCTGGGGCATTATGAACACGGCCTACGAGCAGCTGAAAAAGGGGTTCTATTAAG
GGGTCGGTGGTGGTGGTGGCCCCATGAGTCAAAGGCCCCCGGGAGTATAGAAGGGCCGGT
ATTATAGTACGTTTGTAAATAGATTGATCGTTTAGGAAGGGCGTTACACAAGCGGTCTGC
ACAACTTTGGCACGCACGCAGTCACTGAGGGCGGATGGAACGGACGGTGTGGCCACATCT
CTCCTGCCATCTCTTTTATTTAGGTTAGCTTTGCCGGCATTAGCCAGACAAGGCAAACGA
GCATGAGATTTAAGTATACCCCATCAATCGTGTGTGCGTTTGTGTGTGTGTGTGCTATAC
CTTCTCTCCTCATTTTGCATTTAATGCGCTCCTCATCCTGGATGCTCCGTGTACAGATGA
AACTGCTGTTTTCATCGCTTTAAGTGCTTAAAGTATTCATCTCACCTCGTGTTGTTGGTT
CTCGCCCGTTTGTAAATATATATATCGATATGTATATACTTGTCCGCATCCCGCACACAG
TTCACTGTAGGGCAATACATAGCCCTACACGGCCCAGAAGCCCCCCCCCCCCTACTCCT

consensusID : consensus_2735#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 396
fasta sequence

                              [ATCGGCACGAGGATCATTCTGGAAAACGGTATTAAAGNAGTTTGTACAGGGCTAGTGCCGGTACTTTGGCGCAACGGACCTTCGAACGCTATGTTTTTCGTGCTAAGAGAGGAAGCCGACAGCCGTCTACCGAAACGGGTTTCGATACTGTCGCAACGGACGCAAGAGTTTGTGGCGGGTGCCTGCATCGGTGCATTTATCAGCTCGCTGTTCTACCCGCTGAACGTGGTCAAGGTGACGATGCAGTGCCGGGTCGGCGGACCGTACGACAGTATGTGGACAGCGCTGCAGCAGGTGTACAATGATCGCGATCGAAAGCTGCGAAATGTGTACAAAGGCGTCAGCATGAACTGCACACGTGCGTTCTTCAGCTGGGGCATTATGAACACGGCCTAC]

[+] EMBL BX619205             [ATCGGCACGAGGATCATTCTGGAAAACGGTATTAAAGNAGTTTGTACAGGGCTAGTGCCGGTACTTTGGCGCAACGGACCTTCGAACGCTATGTTTTTCGTGCTAAGAGAGGAAGCCGACAGCCGTCTACCGAAACGGGTTTCGATACTGTCGCAACGGACGCAAGAGTTTGTGGCGGGTGCCTGCATCGGTGCATTTATCAGCTCGCTGTTCTACCCGCTGAACGTGGTCAAGGTGACGATGCAGTGCCGGGTCGGCGGACCGTACGACAGTATGTGGACAGCGCTGCAGCAGGTGTACAATGATCGCGATCGAAAGCTGCGAAATGTGTACAAAGGCGTCAGCATGAACTGCACACGTGCGTTCTTCAGCTGGGGCATTATGAACACGGCCTAC]




>consensus_2735#1
ATCGGCACGAGGATCATTCTGGAAAACGGTATTAAAGNAGTTTGTACAGGGCTAGTGCCG
GTACTTTGGCGCAACGGACCTTCGAACGCTATGTTTTTCGTGCTAAGAGAGGAAGCCGAC
AGCCGTCTACCGAAACGGGTTTCGATACTGTCGCAACGGACGCAAGAGTTTGTGGCGGGT
GCCTGCATCGGTGCATTTATCAGCTCGCTGTTCTACCCGCTGAACGTGGTCAAGGTGACG
ATGCAGTGCCGGGTCGGCGGACCGTACGACAGTATGTGGACAGCGCTGCAGCAGGTGTAC
AATGATCGCGATCGAAAGCTGCGAAATGTGTACAAAGGCGTCAGCATGAACTGCACACGT
GCGTTCTTCAGCTGGGGCATTATGAACACGGCCTAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2735#0      TCTTCAGCTGGGGCATTATGAACACGGCCTACGAGCAGCTGAAAAAGGGGTTCTATTAAG 60
consensus_2735#1      ------------------------------------------------------------
                                                                                  

consensus_2735#0      GGGTCGGTGGTGGTGGTGGCCCCATGAGTCAAAGGCCCCCGGGAGTATAGAAGGGCCGGT 120
consensus_2735#1      ------------------------------------------------------------
                                                                                  

consensus_2735#0      ATTATAGTACGTTTGTAAATAGATTGATCGTTTAGGAAGGGCGTTACACAAGCGGTCTGC 180
consensus_2735#1      --------------ATCGGCACGAGGATCATTCTGGAAAA-CGGTATTAAAGNAGTTTGT 45
                                     *    *    **** **  ****   ** **   ***  ** ** 

consensus_2735#0      ACAACTTTGGCACGCACGCAGTCACTGAGGGCGGATGGAACGGACGGTGTGGCCACATCT 240
consensus_2735#1      ACAGGGCTAGT------GCCGGTACT-----TTGGCGCAACGGAC------------CTT 82
                      ***    * *       ** *  ***       *  * *******              *

consensus_2735#0      CTCCTGCCATCTCTTTTATTTAGGTTAGCTTTGCCGGCATTAGCCAGACAAGGCAAACGA 300
consensus_2735#1      CGAACGCTATGTTTTTCGTGCTAAGAGAGGAAGCCGACAGCCGTCTACCGAAACGGGTTT 142
                      *    ** ** * ***  *             **** **   * *   * *  *      

consensus_2735#0      GCATGAGATTTAAGTATACCCCATCAATCGTGTGTGCGTTTGTGTGTGTGTGTGCTATAC 360
consensus_2735#1      CGATACTGTCGCAACGGACGCAAGAGTTTGTG-GCGGGTGCCTGCATCGGTGCATT-TAT 200
                        **    *   *    ** * *    * *** * * **   **  *  ***   * ** 

consensus_2735#0      CTTCTCTCCTCATTTTGCATTTAATGCGCTCCTCATCCTGGATGCTCCGTGTACAGATGA 420
consensus_2735#1      CAGCTCGCTGTTCTACCCGCTGAACGTGGTCA-------AGGTGA-CGATGCAGTGCCGG 252
                      *  *** *     *   *  * ** * * **         * **  *  ** *  *  * 

consensus_2735#0      AACTGCTGTTTTCATCGCTTTAAGTGCTTAAAGTATTCATCTCACCTCGTGTTGTTGGTT 480
consensus_2735#1      GTCGGCGGACCGTACGACAGTATGTGGACAGCGC-TGCAGCAGGTGT-ACAATGATCGCG 310
                        * ** *     *   *  ** ***   *  *  * ** *     *     ** * *  

consensus_2735#0      CTCGCCCGTTTGTAAATATATATATCGATATGTATATACTTGTCCGCATCCCGCACACAG 540
consensus_2735#1      ATCGAAAGCTGCGAAATGTGTACAAAGGCGTCAGCATG---AACTGCA-CACGTGCGTTC 366
                       ***   * *   **** * ** *  *   *    **      * *** * **  *    

consensus_2735#0      TTCACTGTAGGGCAATACATAGCCCTACACGGCCCAGAAGCCCCCCCCCCCCTACTCCT 599
consensus_2735#1      TTCAGC-TGGGGCATTATGAA------CACGGCCTAC---------------------- 396
                      ****   * ***** **   *      ******* *