These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2738#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 811 fasta sequence [AATCGCCCGAGGTTAAACGAAAGCACTTAACAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGGCAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATATGCTCATTTACTTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAATGTCTATGATGCTGTGATGATGCCTGATGATGCCACATGAACATGTGATGCATGATGTAAATGAAAATGTGAAATGTGAAAATGTGTGAAATGTAACTGTAACAAAATTCACACATAAAAAGTGTAAGAAACTGTGTGTATGCCTAGTGTTGTAGAGTGTGTAATGTGAAAACACACACACAAAACAAAACACAAAAACTNAATAAACAATACGATACGTTGTAAGATATTGGTATAGAAGTTGTTGTTGTTGTTGTGCTGAAGAAGTTGCTAATATATAAATAATTATAACATTAACATTATAACACTTATTATATNAATAACCACTACTTACNCCGTCTCAANTTGTAGTACTAANCATNTCCTCACTCCCAATATCTNCCATGCCAAAAACCCCACNTAAAACCCCCCAATGCANGTGCTAAAAGCAATGTATCCGCACACGCACANACGCNTTNCACACNCCACCCCAGCCAGCAGAAGACAAATAATGAACTCAAAACAANGTAAGAAAAACATTAAAACAAAACCAAACACNTTACACNAACAACAGGTACCCCCCACACGCCTACCAACACCCCACTCGACACACCANCACAACACCAGNGCNNCACANNNACTGCAACGCGTGGACCANACNCCNG] [+] EMBL AL931779 [AATCGCCCGAGGTTAAACGAAAGCACTTAACAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGGCAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATATGCTCATTTACTTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAATGTCTATGATGCTGTGATGATGCCTGATGATGCCACATGAACATGTGATGCATGATGTAAATGAAAATGTGAAATGTGAAAATGTGTGAAATGTAACTGTAACAAAATTCACACATAAAAAGTGTAAGAAACTGTGTGTATGCCTAGTGTTGTAGAGTGTGTAATGTGAAAACACACACACAAAACAAAACACAAAAACTNAATAAACAATACGATACGTTGTAAGATATTGGTATAGAAGTTGTTGTTGTTGTTGTGCTGAAGAAGTTGCTAATATATAAATAATTATAACATTAACATTATAACACTTATTATATNAATAACCACTACTTACNCCGTCTCAANTTGTAGTACTAANCATNTCCTCACTCCCAATATCTNCCATGCCAAAAACCCCACNTAAAACCCCCCAATGCANGTGCTAAAAGCAATGTATCCGCACACGCACANACGCNTTNCACACNCCACCCCAGCCAGCAGAAGACAAATAATGAACTCAAAACAANGTAAGAAAAACATTAAAACAAAACCAAACACNTTACACNAACAACAGGTACCCCCCACACGCCTACCAACACCCCACTCGACACACCANCACAACACCAGNGCNNCACANNNACTGCAACGCGTGGACCANACNCCNG] consensusID : consensus_2738#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 450 fasta sequence [TCCAACCGTGCAAGCGTGCTGGCCGAGTGGTGCGTTGTTGAAGGGTTTGAAGGAAATTCGCCAATCGCTTGAAGAAACGTTTTAAAGGCAAAAAAAAAGAAAGCGTTGCTCCCAACGGAAGATCAAACACCTTTTTTTCTTAGTTTGATTGGAAAGGGGAAACAAATGAAACGAAAGCACTTAAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGACAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATAGCTCATTTACTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAAGTCTAGAGCGGAGAGCCGAGAGCCACAGAACAGGAGCAGAGTAAAGAAAATGGAATGGAAAAGTGGAGAGTAACGCACAATTCACACATAAAAAGGTAAGAAACGCGGTAGCCTAGTGTGTAGAGTGGTAAGG] [+] EMBL BX611671 [TCCAACCGTGCAAGCGTGCTGGCCGAGTGGTGCGTTGTTGAAGGGTTTGAAGGAAATTCGCCAATCGCTTGAAGAAACGTTTTAAAGGCAAAAAAAAAGAAAGCGTTGCTCCCAACGGAAGATCAAACACCTTTTTTTCTTAGTTTGATTGGAAAGGGGAAACAAATGAAACGAAAGCACTTAAGAAGCAGCAGCTAATTTCTTAACCCCGAAAACGACAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATAGCTCATTTACTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAAGTCTAGAGCGGAGAGCCGAGAGCCACAGAACAGGAGCAGAGTAAAGAAAATGGAATGGAAAAGTGGAGAGTAACGCACAATTCACACATAAAAAGGTAAGAAACGCGGTAGCCTAGTGTGTAGAGTGGTAAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2738#0 AATCGCCCGAGGTTAAACGAAAGCACTTAACAGAAGCAGCAGCTAATTTCTTAACCCCGA 60 consensus_2738#1 ------------------------------------------------------------ consensus_2738#0 AAACGGCAAGCCTATCACGACCCGCTGCGTACGTGCCGGATGGAACAGTTTATATGCTCA 120 consensus_2738#1 ------------------------------------------------------------ consensus_2738#0 TTTACTTGTGAAACAAAAGAACAAAACCATTTAAATCAAATTATAAATGTCTATGATGCT 180 consensus_2738#1 ---------------------------------------------------TCCAACCGT 9 * * * consensus_2738#0 GTGATGATGCCTGATGATGCCACATGAACATGTGATGCATGATGTAAATGAAAATGTGAA 240 consensus_2738#1 GCAAGCGTGCTGGCCGA-GTGGTGCGTTGTTGAAGGGTTTGAAGGAAATTCGCCAATCGC 68 * * *** * ** * * ** * *** * **** * consensus_2738#0 ATGTGAAAATGTGTGAAATGTAACTGTAACAAAATTCACACATAAAAAGTGTAAG-AAAC 299 consensus_2738#1 TTGAAGAAACGTTTTAAAGGCAAAAAAAAAGAAAGCGTTGCTCCCAACGGAAGATCAAAC 128 ** *** ** * *** * ** ** *** * ** * * **** consensus_2738#0 TGTGTGTATGCCTAGTGTTGTAGAGTGTGTAATGTGAAAACACACACACAAAACAAAACA 359 consensus_2738#1 ACCTTTTTTTCTTAGTTTGAT------TGGAAAGGGGAAACA---------AATGAAACG 173 * * * * **** * * ** ** * * ***** ** **** consensus_2738#0 CAAAAACTNAATAAACAATACGATACGTTGTAAGATATTGGTATAGAAGTTGTTGTTGTT 419 consensus_2738#1 AAAGCACTTAAGAAGCAGCA-GCTAATTTCTTA-ACCCCGAAAACGACAAGCCTATCAC- 230 ** *** ** ** ** * * ** ** * * * * * ** * * consensus_2738#0 GTTGTGCTGAAGAAGTTGCTAATATATAAATAATTATAACATTAACATTATAACACTTAT 479 consensus_2738#1 GACCCGCTGCGTACGTGCCGGATGGAACAGT--TTATAGCTCATTTACTGTGAAAC---- 284 * **** * ** * ** * * * ***** * * * * * ** consensus_2738#0 TATATNAATAACCACTACTTACNCCGTCTCAANTTGTAGTACTAANCATNTCCTCACTCC 539 consensus_2738#1 -AAAAGAACAAA-ACCATTTAAA-----TCAAATTATAA----AGTCTAGAGCGGAGAGC 333 * * ** ** ** * *** **** ** ** * * * * * consensus_2738#0 CAATATCTNCCATGCCAAAAACCCCACNTAAAACCCCCCAATGCANGTGCTAAAAGCAAT 599 consensus_2738#1 CGAGAGCCACAGAAC--AGGAGCAGAGTAAAGAAAATGGAATGGAAAAGTGGAGAGTAAC 391 * * * * * * * * * * ** * **** * * * ** ** consensus_2738#0 GTATC-CGCACACGCACANACGCNTTNCACACNCCACCCCAGCCAGCAGAAGACAAATAA 658 consensus_2738#1 GCACAATTCACACATAAAAAGGTAAGAAACGCGGTAGCCTAGTGTGTAGAGTGGTAAGG- 450 * * ***** * * * * ** * * ** ** * *** ** consensus_2738#0 TGAACTCAAAACAANGTAAGAAAAACATTAAAACAAAACCAAACACNTTACACNAACAAC 718 consensus_2738#1 ------------------------------------------------------------ consensus_2738#0 AGGTACCCCCCACACGCCTACCAACACCCCACTCGACACACCANCACAACACCAGNGCNN 778 consensus_2738#1 ------------------------------------------------------------ consensus_2738#0 CACANNNACTGCAACGCGTGGACCANACNCCNG 811 consensus_2738#1 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||