These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 756 fasta sequence [GGCAAGATTCGCCACGAGGTTTAACAGGTCGCAGGCCGAGTTATAGAAGACATTCATCCGATCGTTTTAGAGTCCAAGTTTGTGGCCCCCTCCCCACTGGGCGTTTAGCAATGCCAGGGAAAGGGAACAGCAGATCTATATATACATATATTGAATTCAAAGCTTTATTATTGACTTCTTTCGCACTATCCGCATCTCCTGCAAGCAAAACCGTGCAAAACAAAAACCGTAAGATTAGTGCTACACATATATGTCAGAATATTATTACATATTACCCAACCCACACNCCGCACGGGCTGGTTGANCTCGGTTAAACAAACGGTTGCAATCCACTACTACTACTATTACTACTACTATTACTGCGTACTATTACTATCAATGCGATAACTGAGTGTGAGGGATATAGAGCAAGAGTGCTCTTATAAGTTTGCCAAATTATGTGTGATGTTTGAATTTAACTTNCTGTTANCGGCTTCTTCTGGCAAAGTGATACATAAATACATACACACAAAGAGAGAGAGACACACATACACACACACACACACACCTTTGCAACGAAATCATTTAGCATTAACGAAGCATTTCGGCACGAAATCAACGATCGCCTCCACTGTGCTTGGGTATTCGAGCAGAGGTAGTACTACATTCAAGTGCATATTTAGTGACTTTATGCTGCCCCTCGCGGATATGTAGCAGGCGACCAAGCGTCCANGCCGNCCNGCCGGNGCCCAGGGACCACGGACGCAACGACGACCG] [+] EMBL AL934428 [GGCAAGATTCGCCACGAGGTTTAACAGGTCGCAGGCCGAGTTATAGAAGACATTCATCCGATCGTTTTAGAGTCCAAGTTTGTGGCCCCCTCCCCACTGGGCGTTTAGCAATGCCAGGGAAAGGGAACAGCAGATCTATATATACATATATTGAATTCAAAGCTTTATTATTGACTTCTTTCGCACTATCCGCATCTCCTGCAAGCAAAACCGTGCAAAACAAAAACCGTAAGATTAGTGCTACACATATATGTCAGAATATTATTACATATTACCCAACCCACACNCCGCACGGGCTGGTTGANCTCGGTTAAACAAACGGTTGCAATCCACTACTACTACTATTACTACTACTATTACTGCGTACTATTACTATCAATGCGATAACTGAGTGTGAGGGATATAGAGCAAGAGTGCTCTTATAAGTTTGCCAAATTATGTGTGATGTTTGAATTTAACTTNCTGTTANCGGCTTCTTCTGGCAAAGTGATACATAAATACATACACACAAAGAGAGAGAGACACACATACACACACACACACACACCTTTGCAACGAAATCATTTAGCATTAACGAAGCATTTCGGCACGAAATCAACGATCGCCTCCACTGTGCTTGGGTATTCGAGCAGAGGTAGTACTACATTCAAGTGCATATTTAGTGACTTTATGCTGCCCCTCGCGGATATGTAGCAGGCGACCAAGCGTCCANGCCGNCCNGCCGGNGCCCAGGGACCACGGACGCAACGACGACCG] consensusID : consensus_282#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 189 fasta sequence [GTGACCAAACTGAGGAATAAAGCACAACATTTAAAGTAGGGAATCGGTTGGCAGATAGGAGCCTCCCTCTCGAAGAACCTCAAAACAAAGAGGAAAACAAGAGAACAAAGGTTCCACGATTTGGAAGAACAAACTAGCGAATAGAGAGAGAGCAAGGAAGAGGAAGCGCACGTCTAAAGCGCGAAGAGA] [+] EMBL BX608080 [GTGACCAAACTGAGGAATAAAGCACAACATTTAAAGTAGGGAATCGGTTGGCAGATAGGAGCCTCCCTCTCGAAGAACCTCAAAACAAAGAGGAAAACAAGAGAACAAAGGTTCCACGATTTGGAAGAACAAACTAGCGAATAGAGAGAGAGCAAGGAAGAGGAAGCGCACGTCTAAAGCGCGAAGAGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_282#0 GGCAAGATTCGCCACGAGGTTTAACAGGTCGCAGGCCGAGTTATAGAAGACATTCATCCG 60 consensus_282#1 ------------------------------------------------------------ consensus_282#0 ATCGTTTTAGAGTCCAAGTTTGTGGCCCCCTCCCCACTGGGCGTTTAGCAATGCCAGGGA 120 consensus_282#1 ------------------------------------------------------------ consensus_282#0 AAGGGAACAGCAGATCTATATATACATATATTGAATTCAAAGCTTTATTATTGACTTCTT 180 consensus_282#1 ------------------------------------------------------------ consensus_282#0 TCGCACTATCCGCATCTCCTGCAAGCAAAACCGTGCAAAACAAAAACCGTAAGATTAGTG 240 consensus_282#1 ------------------------------------------------------------ consensus_282#0 CTACACATATATGTCAGAATATTATTACATATTACCCAACCCACACNCCGCACGGGCTGG 300 consensus_282#1 ------------------------------------------------------------ consensus_282#0 TTGANCTCGGTTAAACAAACGGTTGCAATCCACTACTACTACTATTACTACTACTATTAC 360 consensus_282#1 ------------------------------------------------------------ consensus_282#0 TGCGTACTATTACTATCAATGCGATAACTGAGTGTGAGGGATATAGAGCAAGAGTGCTCT 420 consensus_282#1 -----------------------GTGACCAAAC-TGAGGAATAAAGCACAACA------T 30 * ** * ***** *** ** *** * * consensus_282#0 TATAAGTTTGCCAAATTATGTGTGATGTTTGAATTTAACTTNCTGTTANCGGCTTCTTCT 480 consensus_282#1 TTAAAGTAGG--GAATCGGTTGGCAGATAGGAGCCTCCCTCTC---GAAGAACCTCAAAA 85 * **** * *** ** * * ** * ** * * * ** consensus_282#0 GGCAAAGTGATACATAAATACATACACACAAAGAGAGAGAGACACACATACACACACACA 540 consensus_282#1 CAAAGAGGAAAACAAGAGAACAAAGGTTCCACGATTTGGAAGAACAAACTAGCGAATAGA 145 * ** * *** * *** * * * ** ** *** * * * * * consensus_282#0 CACACACCTTTGCAACGAAATCATTTAGCATTAACGAAGCATTTCGGCACGAAATCAACG 600 consensus_282#1 GAGAGA-----GCAAGGAAGAGGAAGCGCACGTCTAAAGCGCGAAGAGA----------- 189 * * * **** *** *** **** * * consensus_282#0 ATCGCCTCCACTGTGCTTGGGTATTCGAGCAGAGGTAGTACTACATTCAAGTGCATATTT 660 consensus_282#1 ------------------------------------------------------------ consensus_282#0 AGTGACTTTATGCTGCCCCTCGCGGATATGTAGCAGGCGACCAAGCGTCCANGCCGNCCN 720 consensus_282#1 ------------------------------------------------------------ consensus_282#0 GCCGGNGCCCAGGGACCACGGACGCAACGACGACCG 756 consensus_282#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||