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These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 2919 cluster # 2919       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_2919#0 length = 594 sequences # 1  
consensus_2919#1 length = 118 sequences # 1  

consensusID : consensus_2919#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 594
fasta sequence
                              [CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTACTTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTCGAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGATGGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATCGTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAACCTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAGTACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGATTCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCCCAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAGAACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT]

[+] EMBL BX618368             [CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTACTTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTCGAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGATGGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATCGTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAACCTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAGTACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGATTCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCCCAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAGAACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT]


>consensus_2919#0 CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTAC TTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTC GAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGAT GGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATC GTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAAC CTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAG TACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGAT TCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCC CAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAG AACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT



consensusID : consensus_2919#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 118
fasta sequence
                              [GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCCCAGAACGCCCGGGGGCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAGAACAACATCACG]

[+] EMBL BX609925             [GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCCCAGAACGCCCGGGGGCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAGAACAACATCACG]


>consensus_2919#1 GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCCCAGAACGCCCGGGG GCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAGAACAACATCACG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_2919#0      CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTAC 60
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      TTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTC 120
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      GAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGAT 180
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      GGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATC 240
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      GTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAAC 300
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      CTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAG 360
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      TACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGAT 420
consensus_2919#1      ------------------------------------------------------------
                                                                                  

consensus_2919#0      TCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCC 480
consensus_2919#1      --------------GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCC 46
                                    ******************** *********** *************

consensus_2919#0      CAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAG 540
consensus_2919#1      CAGAACGCCCGGGGGCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAG 106
                      *** ********* ***** ** *********** * **** * ** ******** ****

consensus_2919#0      AACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT 594
consensus_2919#1      AACAACATCACG------------------------------------------ 118
                      *** ********                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)