These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2919#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 594 fasta sequence [CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTACTTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTCGAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGATGGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATCGTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAACCTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAGTACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGATTCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCCCAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAGAACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT] [+] EMBL BX618368 [CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTACTTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTCGAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGATGGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATCGTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAACCTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAGTACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGATTCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCCCAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAGAACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT] consensusID : consensus_2919#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 118 fasta sequence [GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCCCAGAACGCCCGGGGGCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAGAACAACATCACG] [+] EMBL BX609925 [GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCCCAGAACGCCCGGGGGCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAGAACAACATCACG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2919#0 CTGAAGATGTATCTGTACGACCTGGACGTGCTGGGGCATTTCGAAAGCCTGCGCAACTAC 60 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 TTCCTCCTGATGGACGGTGAGTTTTCCACCCACATCTGTGACAATCTGTTCCAGCGGCTC 120 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 GAAACCGTACGCACGCCGGAGGAGCTGCTGAACTACCAAACGCTTCACTCCATCCTGGAT 180 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 GGGGCGCTGTACTCGAGCAATGCCGGCACGGACCGTAATGCCGACCGGCTGTCCTTCATC 240 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 GTGTGCCAGGTGCCGGAAAAGTTTGACCTCTACTCGCCGAACGTGTTCAGCATGCTGAAC 300 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 CTTAGCTACCGGGTCGAGTGGCCCCTCAATCTAATCTTCTCGAACGAAACGATCGAACAG 360 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 TACACGAACGTGTTCAAATACCTGGTGAAGGTGCGCCGCGTTAGCTACGTGCTGGAGGAT 420 consensus_2919#1 ------------------------------------------------------------ consensus_2919#0 TCCTTCCAGCTGCTGAAGGAAGCGAGCAGGCGGCTGGGGAAACCGTTGCTCCATTCGCCC 480 consensus_2919#1 --------------GAAGGAAGCGAGCAGGCGGCGGGGGAAACCGTAGCTCCATTCGCCC 46 ******************** *********** ************* consensus_2919#0 CAGTACGCCCGGGTGCAGCTGATCCGCCACAAGCTGTCCCATCTGGTGAACGCGCTCAAG 540 consensus_2919#1 CAGAACGCCCGGGGGCAGCAGAACCGCCACAAGCGGCCCCACCGGGGGAACGCGCCCAAG 106 *** ********* ***** ** *********** * **** * ** ******** **** consensus_2919#0 AACTACATCACGAGCAGTGCGCTGCACGCGTCCTGGGAAACGTTCCGGGAGGAT 594 consensus_2919#1 AACAACATCACG------------------------------------------ 118 *** ******** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||