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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2961#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 547 fasta sequence
[AGCTACAAATGTCCCCGCTCGAAACGCCAGCAGGGCTACGGAAAGCTGTATCGTGATGCCAAAAATGTTCCCTTCTACGATCACAACGTGAAGCTGTGCGGCACCAACAATCGAACATATCACTCCTGGTGCCACATGCAGAAGGACTCCTGTACGACGGGATTCTACATCGACGTCCAATATGGCGGCTCGTGCGCCTTTGGAAGATAAACTCACCAAAAGGATCGATTCGGGTTCGATCGATCCGATCTGTCGAATAAACGTCACACAGTAAAATGAATGTGACTGTGTCGTATCCAGCAAGCGCAAGATACCAGCACCGGAAGTATAATAAACGTTAATGCAAAAGAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGCGAGAGAAGAAACAGTAAGATAATTGAACAAAAAAACGGGAAGTACATTTGTCGAGAGAAGTGTGTTGGGACAGAAAAGATGTAAAGAAATACTTATCAATGGTACATATTTAACTGTAAATTTAGAAACGCAACCACCAGAAGAGGAGCACACACATTACC]
[+] EMBL BX623100 [AGCTACAAATGTCCCCGCTCGAAACGCCAGCAGGGCTACGGAAAGCTGTATCGTGATGCCAAAAATGTTCCCTTCTACGATCACAACGTGAAGCTGTGCGGCACCAACAATCGAACATATCACTCCTGGTGCCACATGCAGAAGGACTCCTGTACGACGGGATTCTACATCGACGTCCAATATGGCGGCTCGTGCGCCTTTGGAAGATAAACTCACCAAAAGGATCGATTCGGGTTCGATCGATCCGATCTGTCGAATAAACGTCACACAGTAAAATGAATGTGACTGTGTCGTATCCAGCAAGCGCAAGATACCAGCACCGGAAGTATAATAAACGTTAATGCAAAAGAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGCGAGAGAAGAAACAGTAAGATAATTGAACAAAAAAACGGGAAGTACATTTGTCGAGAGAAGTGTGTTGGGACAGAAAAGATGTAAAGAAATACTTATCAATGGTACATATTTAACTGTAAATTTAGAAACGCAACCACCAGAAGAGGAGCACACACATTACC]
consensusID : consensus_2961#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence
[AATCGCCCCGAGGTGTGACTGTGTCGTATCCAGCAAGCGCNAGATACCAGCACCGGAAGTATAATAAACGTTAATGCAAAAGAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGCGAGAGAAGAAACAGTAAGATAATTGAACAAAAAAACGGGAAGTACATTTGTCGAGAGAAGTGTGTTGGGACAGAAAAGATGTAAAGAAATACTTATCAAATGGTACATATTTAACTGTAAACTTTAGAAACGCAACCACCAGAAGCAGGAGCACACACATTACCGAGCATTTTTTCTGTTTCTTTTTTATTATTTCTCTTATTTATGAACCAACAATCCGTCACTTCGTTAACGTTATTTATTTACCAAAACCGTGTACGAAAGTAGCATGCATATTGCACTATAAGCAAATCGAAACATAGAAGCAGTGTGGTGTAGAAATGGTTGTACATAATACAAAGCAAATCATAATTTAACACTGTAGTGTACGTCTGTCGACAACAATATGTTACAAGACGCT]
[+] EMBL AL932536 [AATCGCCCCGAGGTGTGACTGTGTCGTATCCAGCAAGCGCNAGATACCAGCACCGGAAGTATAATAAACGTTAATGCAAAAGAAAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGCGAGAGAAGAAACAGTAAGATAATTGAACAAAAAAACGGGAAGTACATTTGTCGAGAGAAGTGTGTTGGGACAGAAAAGATGTAAAGAAATACTTATCAAATGGTACATATTTAACTGTAAACTTTAGAAACGCAACCACCAGAAGCAGGAGCACACACATTACCGAGCATTTTTTCTGTTTCTTTTTTATTATTTCTCTTATTTATGAACCAACAATCCGTCACTTCGTTAACGTTATTTATTTACCAAAACCGTGTACGAAAGTAGCATGCATATTGCACTATAAGCAAATCGAAACATAGAAGCAGTGTGGTGTAGAAATGGTTGTACATAATACAAAGCAAATCATAATTTAACACTGTAGTGTACGTCTGTCGACAACAATATGTTACAAGACGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_2961#0 AGCTACAAATGTCCCCGCTCGAAACGCCAGCAGGGCTACGGAAAGCTGTATCGTGATGCC 60
consensus_2961#1 ------------------------------------------------------------
consensus_2961#0 AAAAATGTTCCCTTCTACGATCACAACGTGAAGCTGTGCGGCACCAACAATCGAACATAT 120
consensus_2961#1 ------------------------------------------------------------
consensus_2961#0 CACTCCTGGTGCCACATGCAGAAGGACTCCTGTACGACGGGATTCTACATCGACGTCCAA 180
consensus_2961#1 ------------------------------------------------------------
consensus_2961#0 TATGGCGGCTCGTGCGCCTTTGGAAGATAAACTCACCAAAAGGATCGATTCGGGTTCGAT 240
consensus_2961#1 ------------------------------------------------------------
consensus_2961#0 CGATCCGATCTGTCGAATAAACGTCACACAGTAAAATGAATGTGACTGTGTCGTATCCAG 300
consensus_2961#1 ---------------------AATCGCCCCG------AGGTGTGACTGTGTCGTATCCAG 33
** * * * ********************
consensus_2961#0 CAAGCGCAAGATACCAGCACCGGAAGTATAATAAACGTTAATGCAAAAGAAAGAGAGAGA 360
consensus_2961#1 CAAGCGCNAGATACCAGCACCGGAAGTATAATAAACGTTAATGCAAAAGAAAGAGAGAGA 93
******* ****************************************************
consensus_2961#0 GAGAGAAAGAGAGAGAGAGAGAGAGCGAGAGAAGAAACAGTAAGATAATTGAACAAAAAA 420
consensus_2961#1 GAGAGAAAGAGAGAGAGAGAGAGAGCGAGAGAAGAAACAGTAAGATAATTGAACAAAAAA 153
************************************************************
consensus_2961#0 ACGGGAAGTACATTTGTCGAGAGAAGTGTGTTGGGACAGAAAAGATGTAAAGAAATACTT 480
consensus_2961#1 ACGGGAAGTACATTTGTCGAGAGAAGTGTGTTGGGACAGAAAAGATGTAAAGAAATACTT 213
************************************************************
consensus_2961#0 ATCAA-TGGTACATATTTAACTGTAAA-TTTAGAAACGCAACCACCAGAAG-AGGAGCAC 537
consensus_2961#1 ATCAAATGGTACATATTTAACTGTAAACTTTAGAAACGCAACCACCAGAAGCAGGAGCAC 273
***** ********************* *********************** ********
consensus_2961#0 ACACATTACC-------------------------------------------------- 547
consensus_2961#1 ACACATTACCGAGCATTTTTTCTGTTTCTTTTTTATTATTTCTCTTATTTATGAACCAAC 333
**********
consensus_2961#0 ------------------------------------------------------------
consensus_2961#1 AATCCGTCACTTCGTTAACGTTATTTATTTACCAAAACCGTGTACGAAAGTAGCATGCAT 393
consensus_2961#0 ------------------------------------------------------------
consensus_2961#1 ATTGCACTATAAGCAAATCGAAACATAGAAGCAGTGTGGTGTAGAAATGGTTGTACATAA 453
consensus_2961#0 ------------------------------------------------------------
consensus_2961#1 TACAAAGCAAATCATAATTTAACACTGTAGTGTACGTCTGTCGACAACAATATGTTACAA 513
consensus_2961#0 ------
consensus_2961#1 GACGCT 519
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||