These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_2983#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence [CCGCCCACGCGTCCGAAATATTAGTTTTGTACCAACTTTAGAACCATCGGGCAACGACAATGTTCTCCAGGAGGATAATGCTGCTAAGGCCGAGGAAACATCGGATACATCAGAAACTCCTCACACAAAACTACCCGAGCCAGATGAAGGAACTTTCGCAGATGAAACGCCCAATGGCATGATGATAGCGAACGACATTGATTACTATTTGCATACGAACGAACCTTCGAAAGAGGGTAGCGAGAAGCTTTCTTCAATAGCAACACCAGCAATGGACCGACCGCCAGCACCTGTTACACCTCCTGCAGCAAAGTCTGAACCAAAAAGTGCCTTAAATTTCAGCCCCATCGGTCTGTTCGATGATGTTCCACCGCCGGACGATGGCGACGAGACGGATGATGTGACGCACCCGAAACAATCCGCATCCGTGGAGTCAACGTTGCCACCGATCCTGGATGAAGCATCTTCCTATTCGCAAGAATCGCAGTCACTGGACTTCATACCGATCGGATCGGCTGGCGGCAGTCGATCGCGATATCTGTTTGACGATGAACCTCCGCCGGA] [+] EMBL BM619743 [CCGCCCACGCGTCCGAAATATTAGTTTTGTACCAACTTTAGAACCATCGGGCAACGACAATGTTCTCCAGGAGGATAATGCTGCTAAGGCCGAGGAAACATCGGATACATCAGAAACTCCTCACACAAAACTACCCGAGCCAGATGAAGGAACTTTCGCAGATGAAACGCCCAATGGCATGATGATAGCGAACGACATTGATTACTATTTGCATACGAACGAACCTTCGAAAGAGGGTAGCGAGAAGCTTTCTTCAATAGCAACACCAGCAATGGACCGACCGCCAGCACCTGTTACACCTCCTGCAGCAAAGTCTGAACCAAAAAGTGCCTTAAATTTCAGCCCCATCGGTCTGTTCGATGATGTTCCACCGCCGGACGATGGCGACGAGACGGATGATGTGACGCACCCGAAACAATCCGCATCCGTGGAGTCAACGTTGCCACCGATCCTGGATGAAGCATCTTCCTATTCGCAAGAATCGCAGTCACTGGACTTCATACCGATCGGATCGGCTGGCGGCAGTCGATCGCGATATCTGTTTGACGATGAACCTCCGCCGGA] consensusID : consensus_2983#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence [CCGCCCTGTCCAAAATCCTGTTGATCCCAAAACATCCATTTTTGATAATTCAACGTCTGAGAATGAAACGAACCACGGTAATGGAGATAGCATAACTCACCAGAAAAGTGAACTGACTCCGCAACCCAAAGCAAGTGAAGAAAATATTAGTTTTGTACCAACTTTAGAACCATCGGGCAACGACAATGTTCTCCAGGAGGATAATGCTGCTAAGGCCGAGGAAACATCGGATACATCAGAAACTCCTCACACAAAACTACCCGAGCCAGATGAAGGAACTTTCGCAGATGAAACGCCCAATGGCATGATGATAGCGAACGACATTGATTACTATTTGCATACGAACGAACCTTCGAAAGAGGGTAGCGAGAAGCTTTCTTCAATAGCAACACCAGCAATGGACCGACCGCCAGCACCTGTTACACCTCCTGCAGCAAAGTCTGAACCAAAAAAGTGCCTTAAATTTCAGCCCCATCGGTCTGTTCGATGATGTTCCACCGCCGGACGATG] [+] EMBL BM587571 [CCGCCCTGTCCAAAATCCTGTTGATCCCAAAACATCCATTTTTGATAATTCAACGTCTGAGAATGAAACGAACCACGGTAATGGAGATAGCATAACTCACCAGAAAAGTGAACTGACTCCGCAACCCAAAGCAAGTGAAGAAAATATTAGTTTTGTACCAACTTTAGAACCATCGGGCAACGACAATGTTCTCCAGGAGGATAATGCTGCTAAGGCCGAGGAAACATCGGATACATCAGAAACTCCTCACACAAAACTACCCGAGCCAGATGAAGGAACTTTCGCAGATGAAACGCCCAATGGCATGATGATAGCGAACGACATTGATTACTATTTGCATACGAACGAACCTTCGAAAGAGGGTAGCGAGAAGCTTTCTTCAATAGCAACACCAGCAATGGACCGACCGCCAGCACCTGTTACACCTCCTGCAGCAAAGTCTGAACCAAAAAAGTGCCTTAAATTTCAGCCCCATCGGTCTGTTCGATGATGTTCCACCGCCGGACGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_2983#0 ------------------------------------------------------------ consensus_2983#1 CCGCCCTGTCCAAAATCCTGTTGATCCCAAAACATCCATTTTTGATAATTCAACGTCTGA 60 consensus_2983#0 ------------------------------------------------------------ consensus_2983#1 GAATGAAACGAACCACGGTAATGGAGATAGCATAACTCACCAGAAAAGTGAACTGACTCC 120 consensus_2983#0 ------CCGCCCACGCGTCCGAAATATTAGTTTTGTACCAACTTTAGAACCATCGGGCAA 54 consensus_2983#1 GCAACCCAAAGCAAGTGAAGAAAATATTAGTTTTGTACCAACTTTAGAACCATCGGGCAA 180 * ** * * *************************************** consensus_2983#0 CGACAATGTTCTCCAGGAGGATAATGCTGCTAAGGCCGAGGAAACATCGGATACATCAGA 114 consensus_2983#1 CGACAATGTTCTCCAGGAGGATAATGCTGCTAAGGCCGAGGAAACATCGGATACATCAGA 240 ************************************************************ consensus_2983#0 AACTCCTCACACAAAACTACCCGAGCCAGATGAAGGAACTTTCGCAGATGAAACGCCCAA 174 consensus_2983#1 AACTCCTCACACAAAACTACCCGAGCCAGATGAAGGAACTTTCGCAGATGAAACGCCCAA 300 ************************************************************ consensus_2983#0 TGGCATGATGATAGCGAACGACATTGATTACTATTTGCATACGAACGAACCTTCGAAAGA 234 consensus_2983#1 TGGCATGATGATAGCGAACGACATTGATTACTATTTGCATACGAACGAACCTTCGAAAGA 360 ************************************************************ consensus_2983#0 GGGTAGCGAGAAGCTTTCTTCAATAGCAACACCAGCAATGGACCGACCGCCAGCACCTGT 294 consensus_2983#1 GGGTAGCGAGAAGCTTTCTTCAATAGCAACACCAGCAATGGACCGACCGCCAGCACCTGT 420 ************************************************************ consensus_2983#0 TACACCTCCTGCAGCAAAGTCTGAACCAAAAA-GTGCCTTAAATTTCAGCCCCATCGGTC 353 consensus_2983#1 TACACCTCCTGCAGCAAAGTCTGAACCAAAAAAGTGCCTTAAATTTCAGCCCCATCGGTC 480 ******************************** *************************** consensus_2983#0 TGTTCGATGATGTTCCACCGCCGGACGATGGCGACGAGACGGATGATGTGACGCACCCGA 413 consensus_2983#1 TGTTCGATGATGTTCCACCGCCGGACGATG------------------------------ 510 ****************************** consensus_2983#0 AACAATCCGCATCCGTGGAGTCAACGTTGCCACCGATCCTGGATGAAGCATCTTCCTATT 473 consensus_2983#1 ------------------------------------------------------------ consensus_2983#0 CGCAAGAATCGCAGTCACTGGACTTCATACCGATCGGATCGGCTGGCGGCAGTCGATCGC 533 consensus_2983#1 ------------------------------------------------------------ consensus_2983#0 GATATCTGTTTGACGATGAACCTCCGCCGGA 564 consensus_2983#1 ------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||