These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3042#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence [CCGCCCACGCGTCCGGTACCAGTCGGATCGGAGAAGGACGTGATTGTTGGGCTGCTTTGGTGGAACGCGTCGGTCGCTCAGTACGCTAGACCAGTATGACATTCTTTCAAGCGCTTGAAAAATCCTCCGCGGTGGAGTTGTACACCTACCTGACGCTGATCCTAGTATGTGTCCTGTTGTACATCTTCTCGGACTATCTGAAGATATGTGCGCTCGCGTTTCGTTTACCCGGTCCGAAGTCCTATCCCATCATTGGCAACTGCTTGGACATTGCCCGAAAGGATCTTATTACGCGTGAGATGGCCCAGGCGTACAAAAACTATGGCCCGTTGGCGCGCGTTTGGATATTTGTCTTCCCAATGTTTGTCGTGTTCGATCCGAACGATCTGAAGGTGATCCTGTCCTCGAAGAAGCACACCAACAAATCCATGTTTTACAAGCTGCTGCACAACTTCCTGGGCCGTGGACTGATCACCAGCAGTGGACACAAATGGGAGCTCGCATCGGAAG] [+] EMBL BM641756 [CCGCCCACGCGTCCGGTACCAGTCGGATCGGAGAAGGACGTGATTGTTGGGCTGCTTTGGTGGAACGCGTCGGTCGCTCAGTACGCTAGACCAGTATGACATTCTTTCAAGCGCTTGAAAAATCCTCCGCGGTGGAGTTGTACACCTACCTGACGCTGATCCTAGTATGTGTCCTGTTGTACATCTTCTCGGACTATCTGAAGATATGTGCGCTCGCGTTTCGTTTACCCGGTCCGAAGTCCTATCCCATCATTGGCAACTGCTTGGACATTGCCCGAAAGGATCTTATTACGCGTGAGATGGCCCAGGCGTACAAAAACTATGGCCCGTTGGCGCGCGTTTGGATATTTGTCTTCCCAATGTTTGTCGTGTTCGATCCGAACGATCTGAAGGTGATCCTGTCCTCGAAGAAGCACACCAACAAATCCATGTTTTACAAGCTGCTGCACAACTTCCTGGGCCGTGGACTGATCACCAGCAGTGGACACAAATGGGAGCTCGCATCGGAAG] consensusID : consensus_3042#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence [GGCACTGTGCGCAGCATCCGTAAAAATTCTCGCCACATTTGTGCAAAACCTTCCGGTGCAGTCCGGGAGCAGTCGGAACTCGCCAACCCGGTAGTAGTTAGCGGATCCCCGTACCAGTCGGATCGGAGTAGGACGTGATTGCTGGGCTGCTTCGGTGGAACGCGTCGGTCGCGCAGTACGCTAGATACCAGTATGACATTCTTCCAAGCGCTTGAAAAATCTTCCGCGGTGGAGTTGTACACCTACCTGACGCTGATCCTAGTATGTTTCCTTT] [+] EMBL CNS090P5 [GGCACTGTGCGCAGCATCCGTAAAAATTCTCGCCACATTTGTGCAAAACCTTCCGGTGCAGTCCGGGAGCAGTCGGAACTCGCCAACCCGGTAGTAGTTAGCGGATCCCCGTACCAGTCGGATCGGAGTAGGACGTGATTGCTGGGCTGCTTCGGTGGAACGCGTCGGTCGCGCAGTACGCTAGATACCAGTATGACATTCTTCCAAGCGCTTGAAAAATCTTCCGCGGTGGAGTTGTACACCTACCTGACGCTGATCCTAGTATGTTTCCTTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3042#0 ------------------------------------------------------------ consensus_3042#1 GGCACTGTGCGCAGCATCCGTAAAAATTCTCGCCACATTTGTGCAAAACCTTCCGGTGCA 60 consensus_3042#0 ----------------------------------CCGCCCACGCGTCCG-GTACCAGTCG 25 consensus_3042#1 GTCCGGGAGCAGTCGGAACTCGCCAACCCGGTAGTAGTTAGCGGATCCCCGTACCAGTCG 120 * ** *** ********** consensus_3042#0 GATCGGAGAAGGACGTGATTGTTGGGCTGCTTTGGTGGAACGCGTCGGTCGCTCAGTACG 85 consensus_3042#1 GATCGGAGTAGGACGTGATTGCTGGGCTGCTTCGGTGGAACGCGTCGGTCGCGCAGTACG 180 ******** ************ ********** ******************* ******* consensus_3042#0 CTAGA--CCAGTATGACATTCTTTCAAGCGCTTGAAAAATCCTCCGCGGTGGAGTTGTAC 143 consensus_3042#1 CTAGATACCAGTATGACATTCTTCCAAGCGCTTGAAAAATCTTCCGCGGTGGAGTTGTAC 240 ***** **************** ***************** ****************** consensus_3042#0 ACCTACCTGACGCTGATCCTAGTATGTGTCCTGTTGTACATCTTCTCGGACTATCTGAAG 203 consensus_3042#1 ACCTACCTGACGCTGATCCTAGTATGTTTCCTTT-------------------------- 274 *************************** **** * consensus_3042#0 ATATGTGCGCTCGCGTTTCGTTTACCCGGTCCGAAGTCCTATCCCATCATTGGCAACTGC 263 consensus_3042#1 ------------------------------------------------------------ consensus_3042#0 TTGGACATTGCCCGAAAGGATCTTATTACGCGTGAGATGGCCCAGGCGTACAAAAACTAT 323 consensus_3042#1 ------------------------------------------------------------ consensus_3042#0 GGCCCGTTGGCGCGCGTTTGGATATTTGTCTTCCCAATGTTTGTCGTGTTCGATCCGAAC 383 consensus_3042#1 ------------------------------------------------------------ consensus_3042#0 GATCTGAAGGTGATCCTGTCCTCGAAGAAGCACACCAACAAATCCATGTTTTACAAGCTG 443 consensus_3042#1 ------------------------------------------------------------ consensus_3042#0 CTGCACAACTTCCTGGGCCGTGGACTGATCACCAGCAGTGGACACAAATGGGAGCTCGCA 503 consensus_3042#1 ------------------------------------------------------------ consensus_3042#0 TCGGAAG 510 consensus_3042#1 ------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||