Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 3073 cluster # 3073       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3073#0 length = 1240 sequences # 2  

consensusID : consensus_3073#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1240
fasta sequence
                              [TTAAGCTGGGCGAAATCGATGAAGCTCTTACTGATTTGCCCTCGAATGCAACTGAACAATTGGCGCAGCAGAAGGGATACAGCAAGGAATTTCTACAGAACAATTTTCCCAGCGTATCGGCTAATCCTCTGCCTATGGTGTGCGGTGAACAACACTCTTCCACACTATCCAACAAGATAACCACAACAACACTTCCTGCCACTATACCAGCTGCTAGCGCAATTCTTACGCGTCGACGAACGGCAAGCGATGCAAGCGTGTTAGGTGCGTCGGCACAAAGAAGGCAGCCACCACCACCTCCACCACCTCCAGCACCACTGATGCTCTCTTCCATTGCCCCCGAGTCGGAATCTCGCGATCCAACGTACGAAAATTTGGACATTTTTCAGACGCACAACAGCTTTTGCATTGATACAGCCTCGCTGCACTGTGAATCGATATTAGAGAATGACGCCGACTCCTGTCCCACACCCCACGGCATCGGAGGTTCAACGGCAGCTACCGATCTGGTGGACGGATTTGAAGCGTCCATTGTCTTTGACAGTATTAATAGCAGCGAGTTCCACCTAACGCGACAACCGATCAAACCACCCAGTGCCGAAAATGAACAGCATGATCGTACCACACAGCCAACTACCGAA-GGCGAATTGAAAAAGTCCATGAACTTTGTCAG-CTGTGAAGATTTGCTAGAGTTTGCCGAAAAGCCTAAAGGACGTGCCCGAGGATTAGAGTCCGATGAAGTAAGAATCATGTCAAAGGNCCTTGGTAAAAAGGTAGGTAGCGTTCGCTAACTCTTCCCCGCAGGCAGAATAGTTTTTCACAATCTATTTTCTTTTTTTCGCCTTTAGCCTTCTCCTGCACAATGTTTGCTAACGCTGGAGTTTATTGACTGGGATATACACAAAGCAATCAAGCTATGCAAGCTGCAAACCATTCTCGAATCATTTAATCTCTCGCTACAGGAATGCAGCGATGCACTGCAAATGTACGATTGGGATCTTCATACTACGGCCCTAAAGTTAAAAAGTGGCAATAGCTCCAGGTGATCGTAAGAAACCAACGCATAAAAATACAAATACTCCCTAAGCAAATGCCTAAAAACTACAATACTCACGAGCTCTCTTTTAATCGTGAGTATGCCAGTTAATTTCATACGATTGAACGTTTTAAAATTGTATTCGTAATATAGGCCATATTTTAACTACAAATATTTGAAGTACAAGATATTTGAATAAATCGG]

[+] EMBL BX627307             [TTAAGCTGGGCGAAATCGATGAAGCTCTTACTGATTTGCCCTCGAATGCAACTGAACAATTGGCGCAGCAGAAGGGATACAGCAAGGAATTTCTACAGAACAATTTTCCCAGCGTATCGGCTAATCCTCTGCCTATGGTGTGCGGTGAACAACACTCTTCCACACTATCCAACAAGATAACCACAACAACACTTCCTGCCACTATACCAGCTGCTAGCGCAATTCTTACGCGTCGACGAACGGCAAGCGATGCAAGCGTGTTAGGTGCGTCGGCACAAAGAAGGCAGCCACCACCACCTCCACCACCTCCAGCACCACTGATGCTCTCTTCCATTGCCCCCGAGTCGGAATCTCGCGATCCAACGTACGAAAATTTGGACATTTTTCAGACGCACAACAGCTTTTGCATTGATACAGCCTCGCTGCACTGTGAATCGATATTAGAGAATGACGCCGACTCCTGTCCCACACCCCACGGCATCGGAGGTTCAACGGCAGCTACCGATCTGGTGGACGGATTTGAAGCGTCCATTGTCTTTGACAGTATTAATAGCAGCGAGTTCCACCTAACGCGACAACCGATCAAACCACCCAGTGCCGAAAATGAACAGCATGATCGTACCACACAGCCAACTACCGAA GGCGAATTGAAAAAGTCCATGAACTTTGTCAG CTGTGAAGATTTGCTAGAGTTTGCCGAAAAGCCTAAAGGACGTGCCCGAGGATTAGAGTCCGATGAAGTAAGAATCATGTCAAAGGNCCTTGGTAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL BM593244             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAGCGAGTTCCACCAAACGCGACAACCGATCAAACCACCCAGTGCCGAAAATGAACAGCATGATCGTACCACACAGCCAACTACCGAAGGGCGAATTGAAAAAGTCCATGAACTTTGTCAGCCTGTGAAGATTTGCTAGAGTTTGCCGAAAAGCCAAAAGGACGTGCCCGAGGACTAGAGTCCGATGAAGTAAGAATCATGTCAAAGGTCCTTGGTAAAAAGGTAGGTAGCGTTCGCTAACTCTTCCCCGCAGGCAGAATAGTTTTTCACAATCTATTTTCTTTTTTTCGCCTTTAGCCTTCTCCTGCACAATGTTTGCTAACGCTGGAGTTTATTGACTGGGATATACACAAAGCAATCAAGCTATGCAAGCTGCAAACCATTCTCGAATCATTTAATCTCTCGCTACAGGAATGCAGCGATGCACTGCAAATGTACGATTGGGATCTTCATACTACGGCCCTAAAGTTAAAAAGTGGCAATAGCTCCAGGTGATCGTAAGAAACCAACGCATAAAAATACAAATACTCCCTAAGCAAATGCCTAAAAACTACAATACTCACGAGCTCTCTTTTAATCGTGAGTATGCCAGTTAATTTCATACGATTGAACGTTTTAAAATTGTATTCGTAATATAGGCCATATTTTAACTACAAATATTTGAAGTACAAGATATTTGAATAAATCGG]


>consensus_3073#0 TTAAGCTGGGCGAAATCGATGAAGCTCTTACTGATTTGCCCTCGAATGCAACTGAACAAT TGGCGCAGCAGAAGGGATACAGCAAGGAATTTCTACAGAACAATTTTCCCAGCGTATCGG CTAATCCTCTGCCTATGGTGTGCGGTGAACAACACTCTTCCACACTATCCAACAAGATAA CCACAACAACACTTCCTGCCACTATACCAGCTGCTAGCGCAATTCTTACGCGTCGACGAA CGGCAAGCGATGCAAGCGTGTTAGGTGCGTCGGCACAAAGAAGGCAGCCACCACCACCTC CACCACCTCCAGCACCACTGATGCTCTCTTCCATTGCCCCCGAGTCGGAATCTCGCGATC CAACGTACGAAAATTTGGACATTTTTCAGACGCACAACAGCTTTTGCATTGATACAGCCT CGCTGCACTGTGAATCGATATTAGAGAATGACGCCGACTCCTGTCCCACACCCCACGGCA TCGGAGGTTCAACGGCAGCTACCGATCTGGTGGACGGATTTGAAGCGTCCATTGTCTTTG ACAGTATTAATAGCAGCGAGTTCCACCTAACGCGACAACCGATCAAACCACCCAGTGCCG AAAATGAACAGCATGATCGTACCACACAGCCAACTACCGAAGGCGAATTGAAAAAGTCCA TGAACTTTGTCAGCTGTGAAGATTTGCTAGAGTTTGCCGAAAAGCCTAAAGGACGTGCCC GAGGATTAGAGTCCGATGAAGTAAGAATCATGTCAAAGGNCCTTGGTAAAAAGGTAGGTA GCGTTCGCTAACTCTTCCCCGCAGGCAGAATAGTTTTTCACAATCTATTTTCTTTTTTTC GCCTTTAGCCTTCTCCTGCACAATGTTTGCTAACGCTGGAGTTTATTGACTGGGATATAC ACAAAGCAATCAAGCTATGCAAGCTGCAAACCATTCTCGAATCATTTAATCTCTCGCTAC AGGAATGCAGCGATGCACTGCAAATGTACGATTGGGATCTTCATACTACGGCCCTAAAGT TAAAAAGTGGCAATAGCTCCAGGTGATCGTAAGAAACCAACGCATAAAAATACAAATACT CCCTAAGCAAATGCCTAAAAACTACAATACTCACGAGCTCTCTTTTAATCGTGAGTATGC CAGTTAATTTCATACGATTGAACGTTTTAAAATTGTATTCGTAATATAGGCCATATTTTA ACTACAAATATTTGAAGTACAAGATATTTGAATAAATCGG



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)