These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 511 fasta sequence [GGCTAGACGCGCAGGGCAACATTGAACAACCCGCAACACTGCTGGCCCGGTTCGAAAGGGTACTGAAGGACGCGAAAGCTCCGGCCGCCGATCCGCTTGGTCTGCTGACGACGGAAAACCGTGACACGTGGGCAACGGCCCGAACGCACCTCACCCAGCTCGGCACCAATGCCCGTTCGCTCGAGCTGGTCGATTCTGCCCTGTTCTGCATCTGTCTCGACGATTCGACGATCGAGCCGGAAAATCCCATCCCGGCCATCCGCGAGTTCCTGTTCGGCGACGGCACCAACCGTTGGTTCGACAAATCGTTCACGCTGATCGTGGCCAAGGACGGTACGGCGGGCATCAACTTTGAGCACTCCTGGGGCGATGGTGTGGCCGTGCTGCGCTACTTCCAGGAGATCTTTAAGGAAACCACAACGGCACCGTTCGCCCAGGTCGGACTGCAAGGTGTGGACAATCAGTCCAAGGACGCAGTCGTACCGATCGAGTTCACGCTGGACGATCGGGT] [+] EMBL BX625008 [GGCTAGACGCGCAGGGCAACATTGAACAACCCGCAACACTGCTGGCCCGGTTCGAAAGGGTACTGAAGGACGCGAAAGCTCCGGCCGCCGATCCGCTTGGTCTGCTGACGACGGAAAACCGTGACACGTGGGCAACGGCCCGAACGCACCTCACCCAGCTCGGCACCAATGCCCGTTCGCTCGAGCTGGTCGATTCTGCCCTGTTCTGCATCTGTCTCGACGATTCGACGATCGAGCCGGAAAATCCCATCCCGGCCATCCGCGAGTTCCTGTTCGGCGACGGCACCAACCGTTGGTTCGACAAATCGTTCACGCTGATCGTGGCCAAGGACGGTACGGCGGGCATCAACTTTGAGCACTCCTGGGGCGATGGTGTGGCCGTGCTGCGCTACTTCCAGGAGATCTTTAAGGAAACCACAACGGCACCGTTCGCCCAGGTCGGACTGCAAGGTGTGGACAATCAGTCCAAGGACGCAGTCGTACCGATCGAGTTCACGCTGGACGATCGGGT] consensusID : consensus_3076#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 255 fasta sequence [GCTCGAAGGCAGAATCGGCACACGGCGCATGTTACTGCTGGCCCGGTTCGAAAGGGTACTGAATGGACGCGAAAGCTCCGGCCGCCGATCCGCTTGGTCTGCTGACGACGGACAAACCGTGACACGTGGGCAACGGCCCGAACGCACCTCACCCAGCTCGGCACCAATGCCCGTTCGCTCGAGCTGGTCGATTCTGCCCTGTTCTGCATCTGGTCTCGACGAATTCGACGNATCGAGCCGGGAAAAGTCCCGATC] [+] EMBL BX466401 [GCTCGAAGGCAGAATCGGCACACGGCGCATGTTACTGCTGGCCCGGTTCGAAAGGGTACTGAATGGACGCGAAAGCTCCGGCCGCCGATCCGCTTGGTCTGCTGACGACGGACAAACCGTGACACGTGGGCAACGGCCCGAACGCACCTCACCCAGCTCGGCACCAATGCCCGTTCGCTCGAGCTGGTCGATTCTGCCCTGTTCTGCATCTGGTCTCGACGAATTCGACGNATCGAGCCGGGAAAAGTCCCGATC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3076#0 GGCTAGACGCGCAGGGCAACATTGAACAACCCGCAACACTGCTGGCCCGGTTCGAAAGGG 60 consensus_3076#1 -GCTCGAAG-GCAGAAT--CGGCACACGGCGCATGTTACTGCTGGCCCGGTTCGAAAGGG 56 *** ** * **** * ** * * *********************** consensus_3076#0 TACTGAA-GGACGCGAAAGCTCCGGCCGCCGATCCGCTTGGTCTGCTGACGACGGA-AAA 118 consensus_3076#1 TACTGAATGGACGCGAAAGCTCCGGCCGCCGATCCGCTTGGTCTGCTGACGACGGACAAA 116 ******* ************************************************ *** consensus_3076#0 CCGTGACACGTGGGCAACGGCCCGAACGCACCTCACCCAGCTCGGCACCAATGCCCGTTC 178 consensus_3076#1 CCGTGACACGTGGGCAACGGCCCGAACGCACCTCACCCAGCTCGGCACCAATGCCCGTTC 176 ************************************************************ consensus_3076#0 GCTCGAGCTGGTCGATTCTGCCCTGTTCTGCATCTG-TCTCGACGA-TTCGACGA-TCGA 235 consensus_3076#1 GCTCGAGCTGGTCGATTCTGCCCTGTTCTGCATCTGGTCTCGACGAATTCGACGNATCGA 236 ************************************ ********* ******* **** consensus_3076#0 GCCGGAAAATCCCATCCCGGCCATCCGCGAGTTCCTGTTCGGCGACGGCACCAACCGTTG 295 consensus_3076#1 GCCGGGAAA---AGTCCCGATC-------------------------------------- 255 ***** *** ***** * consensus_3076#0 GTTCGACAAATCGTTCACGCTGATCGTGGCCAAGGACGGTACGGCGGGCATCAACTTTGA 355 consensus_3076#1 ------------------------------------------------------------ consensus_3076#0 GCACTCCTGGGGCGATGGTGTGGCCGTGCTGCGCTACTTCCAGGAGATCTTTAAGGAAAC 415 consensus_3076#1 ------------------------------------------------------------ consensus_3076#0 CACAACGGCACCGTTCGCCCAGGTCGGACTGCAAGGTGTGGACAATCAGTCCAAGGACGC 475 consensus_3076#1 ------------------------------------------------------------ consensus_3076#0 AGTCGTACCGATCGAGTTCACGCTGGACGATCGGGT 511 consensus_3076#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||