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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3202#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 965 fasta sequence
[CCGAGCGGCTACAGCCGGACTGACAAATGTCGAACGTCGGAAAAAATAAGTTTCTCCACTGAGGAAAGTACTTTTTCGTGCAATTGGTATCCATCAAATGCTACAGTTTACTTCATCGCGCAAGTAAAGCATGAAAAGTGTGGTAGAGCGTTAGTATTTTGTCCCCAAAGATAGTTGAAAGTAACGCTGTGTGCAGAGGGAAGACCGGCGAAGTGCAGAAGAAGCGGAAAAGCTAGTTTTTGTATCGCTGGTAATTTGTAGTGGTGGTAGTGCAGAGAGGACCGCTATATCTGCCTGTGTGCTGTCCGTGTGGTGGTGGTGTCATCGACGGTGTAAAAGAGCTTTACACAGTCGCGCTGACTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTTGACCAGGATTACGCGCAAAACAATGACGATTTCGGTGGCGATAGTGGCGACCTGTACGACGATGTAATCGTACCATCCGGGGACCGCAACAATGCGGGCAGAGGCCCGTCGATGGACCGGGGCGACGGTGTCGATACGAATGGTTCGTACCACCATCATCCCGGGGCTTGGTCGCTCAGCCACATTCCACGCCGTCATCAGCTGTACGTGGGCAATCTGCCCTGGTGGACGACGGACCAGGACATCACCGACTCGGTCGCGGACGTTGGCGTGAACGATTTCCAGGAGGTGAAGTTCTTCGAGAATCGTGCCAATGGACAATCGAAGGGTTTCTGCGTGATTTCGCTCGGTTCGGAAAACAGCATGCGGCTCGTAATGGAACGGCTACCGAAGAAGGAACTGCACGGTCAGAATCCGGTCGTGACACTGCCAACGAAGCAGGCGCTGAATCAGTTCGAAAGCCAGCAAAAAACCCGACCCACGCCACCGGCACCAGGGCAAAGCAATGGACCGCGACCGCCTGTACCCGGCATGCCGATGGGTGGCCC]
[+] EMBL BM580710 [CCGAGCGGCTACAGCCGGACTGACAAATGTCGAACGTCGGAAAAAATAAGTTTCTCCACTGAGGAAAGTACTTTTTCGTGCAATTGGTATCCATCAAATGCTACAGTTTACTTCATCGCGCAAGTAAAGCATGAAAAGTGTGGTAGAGCGTTAGTATTTTGTCCCCAAAGATAGTTGAAAGTAACGCTGTGTGCAGAGGGAAGACCGGCGAAGTGCAGAAGAAGCGGAAAAGCTAGTTTTTGTATCGCTGGTAATTTGTAGTGGTGGTAGTGCAGAGAGGACCGCTATATCTGCCTGTGTGCTGTCCGTGTGGTGGTGGTGTCATCGACGGTGTAAAAGAGCTTTACACAGTCGCGCTGACTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTTG ]
[+] EMBL BM617331 [ ccgGCAGAGAGGGCCGCTATATCTGCCTGTGTGCTGTCCGTGTGGTGGTGGTGTCATCGACGGTGTAAAAGAGCTTTACACAGTCGCGCTGACTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTGGACCAGGATTACGCGCAAAACAATGACGATTTCGGTGGCGATAGTGGCGACCTGTACGACGATGTAATCGTACCATCCGGGGACCGCAACAATGCGGGCAGAGGCCCGTCGATGGACCGGGGCGACGGTGTCGATACGAATGGTTCGTACCACCATCATCCCGGGGCTTGGTCGCTCAGCCACATTCCACGCCGTCATCAGCTGTACGTGGGCAATCTGCCCTGGTGGACGACGGACCAGGACATCACCGACTCGGTCGCGGACGTTGGCGTGAACGATTTCCAGGAGGTGAAGTTCTTCGAGAATCGTGCCAATGGACAATCGAAGGGTTTCTGCGTGATTTCGCTCGGTTCGGAAAACAGCATGCGGCTCGTAATGGAACGGCTACCGAAGAAGGAACTGCACGGTCAGAATCCGGTCGTGACACTGCCAACGAAGCAGGCGCTGAATCAGTTCGAAAGCCAGCAAAAAACCCGACCCACGCCACCGGCACCAGGGCAAAGCAATGGACCGCGACCGCCTGTACCCGGCATGCCGATGGGTGGCCC]
consensusID : consensus_3202#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 591 fasta sequence
[CCGCGGACGCGTGGGCGCGCTGACTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTGGACCAGGATTACGCGCAAAACAATGACGATTTCGGTGGCGATAGTGGCGACCTGTACGACGATGTAATCGTACCATCCGGGGACCGCAACAATGCGGGCAGAGGCCCGTCGATGGACCGGGGCGACGGTGTCGATACGAATGGTTCGTACCACCATCATCCCGGGGCTTGGTCGCTCAGCCACATTCCACGCCGTCATCAGCTGTACGTGGGCAATCTGCCCTGGTGGACGACGGACCAGGACATCACCGACTCGGTCGCGGACGTTGGCGTGAACGATTTCCAGGAGGTGAAGTTCTTCGAGAATCGTGCCAATGGACAATCGAAGGGTTTCTGCGTGATTTCGCTCGGTTCGGAAAACAGCATGCGGCTCGTAATGGAACGGCTACCGAAGAAGGAACTGCACGGTCAGAATCCGGTCGTGACACTGCCAACGAAGCAGGCGCTGAATCAGTTCGAAAGCCAGCAAAAAACCAGACCCACGCCACCGGCACCAGGGCAAAGCAATGGAC]
[+] EMBL BM595888 [CCGCGGACGCGTGGGCGCGCTGACTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTGGACCAGGATTACGCGCAAAACAATGACGATTTCGGTGGCGATAGTGGCGACCTGTACGACGATGTAATCGTACCATCCGGGGACCGCAACAATGCGGGCAGAGGCCCGTCGATGGACCGGGGCGACGGTGTCGATACGAATGGTTCGTACCACCATCATCCCGGGGCTTGGTCGCTCAGCCACATTCCACGCCGTCATCAGCTGTACGTGGGCAATCTGCCCTGGTGGACGACGGACCAGGACATCACCGACTCGGTCGCGGACGTTGGCGTGAACGATTTCCAGGAGGTGAAGTTCTTCGAGAATCGTGCCAATGGACAATCGAAGGGTTTCTGCGTGATTTCGCTCGGTTCGGAAAACAGCATGCGGCTCGTAATGGAACGGCTACCGAAGAAGGAACTGCACGGTCAGAATCCGGTCGTGACACTGCCAACGAAGCAGGCGCTGAATCAGTTCGAAAGCCAGCAAAAAACCAGACCCACGCCACCGGCACCAGGGCAAAGCAATGGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3202#0 CCGAGCGGCTACAGCCGGACTGACAAATGTCGAACGTCGGAAAAAATAAGTTTCTCCACT 60
consensus_3202#1 ------------------------------------------------------------
consensus_3202#0 GAGGAAAGTACTTTTTCGTGCAATTGGTATCCATCAAATGCTACAGTTTACTTCATCGCG 120
consensus_3202#1 ------------------------------------------------------------
consensus_3202#0 CAAGTAAAGCATGAAAAGTGTGGTAGAGCGTTAGTATTTTGTCCCCAAAGATAGTTGAAA 180
consensus_3202#1 ------------------------------------------------------------
consensus_3202#0 GTAACGCTGTGTGCAGAGGGAAGACCGGCGAAGTGCAGAAGAAGCGGAAAAGCTAGTTTT 240
consensus_3202#1 ------------------------------------------------------------
consensus_3202#0 TGTATCGCTGGTAATTTGTAGTGGTGGTAGTGCAGAGAGGACCGCTATATCTGCCTGTGT 300
consensus_3202#1 ------------------------------------------------------------
consensus_3202#0 GCTGTCCGTGTGGTGGTGGTGTCATCGACGGTGTAAAAGAGCTTTACACAGTCGCGCTGA 360
consensus_3202#1 ---------------------------------CCGCGGA----CGCGTGGGCGCGCTGA 23
** * * ********
consensus_3202#0 CTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTTGAC 420
consensus_3202#1 CTGAAGCAGAGAAAGATGGCCGATGGCGTTGAAATCGATCTGTACGCCGACGATTTGGAC 83
******************************************************** ***
consensus_3202#0 CAGGATTACGCGCAAAACAATGACGATTTCGGTGGCGATAGTGGCGACCTGTACGACGAT 480
consensus_3202#1 CAGGATTACGCGCAAAACAATGACGATTTCGGTGGCGATAGTGGCGACCTGTACGACGAT 143
************************************************************
consensus_3202#0 GTAATCGTACCATCCGGGGACCGCAACAATGCGGGCAGAGGCCCGTCGATGGACCGGGGC 540
consensus_3202#1 GTAATCGTACCATCCGGGGACCGCAACAATGCGGGCAGAGGCCCGTCGATGGACCGGGGC 203
************************************************************
consensus_3202#0 GACGGTGTCGATACGAATGGTTCGTACCACCATCATCCCGGGGCTTGGTCGCTCAGCCAC 600
consensus_3202#1 GACGGTGTCGATACGAATGGTTCGTACCACCATCATCCCGGGGCTTGGTCGCTCAGCCAC 263
************************************************************
consensus_3202#0 ATTCCACGCCGTCATCAGCTGTACGTGGGCAATCTGCCCTGGTGGACGACGGACCAGGAC 660
consensus_3202#1 ATTCCACGCCGTCATCAGCTGTACGTGGGCAATCTGCCCTGGTGGACGACGGACCAGGAC 323
************************************************************
consensus_3202#0 ATCACCGACTCGGTCGCGGACGTTGGCGTGAACGATTTCCAGGAGGTGAAGTTCTTCGAG 720
consensus_3202#1 ATCACCGACTCGGTCGCGGACGTTGGCGTGAACGATTTCCAGGAGGTGAAGTTCTTCGAG 383
************************************************************
consensus_3202#0 AATCGTGCCAATGGACAATCGAAGGGTTTCTGCGTGATTTCGCTCGGTTCGGAAAACAGC 780
consensus_3202#1 AATCGTGCCAATGGACAATCGAAGGGTTTCTGCGTGATTTCGCTCGGTTCGGAAAACAGC 443
************************************************************
consensus_3202#0 ATGCGGCTCGTAATGGAACGGCTACCGAAGAAGGAACTGCACGGTCAGAATCCGGTCGTG 840
consensus_3202#1 ATGCGGCTCGTAATGGAACGGCTACCGAAGAAGGAACTGCACGGTCAGAATCCGGTCGTG 503
************************************************************
consensus_3202#0 ACACTGCCAACGAAGCAGGCGCTGAATCAGTTCGAAAGCCAGCAAAAAACCCGACCCACG 900
consensus_3202#1 ACACTGCCAACGAAGCAGGCGCTGAATCAGTTCGAAAGCCAGCAAAAAACCAGACCCACG 563
*************************************************** ********
consensus_3202#0 CCACCGGCACCAGGGCAAAGCAATGGACCGCGACCGCCTGTACCCGGCATGCCGATGGGT 960
consensus_3202#1 CCACCGGCACCAGGGCAAAGCAATGGAC-------------------------------- 591
****************************
consensus_3202#0 GGCCC 965
consensus_3202#1 -----
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||