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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3389#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 793 fasta sequence
[CTATCGAAGCCCAAAGCATTGGAAAAGAGTATTCTGTCGGGAACCAACATAGGGTGAAACAACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAAGATCGTCTTGGAGAGCAAACTACAAAAAGAAGAAAACAATACAAAAAGTAACAACATATATCCGCAAACGACACAACAAAATAGCGAAAAATGCAATAGCAATATAAAGATAAACAGTAAACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTATACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGCTTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACGAATGTATAAAAGCGTAGCTAGTACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCAATGCTACAATGCCGAGCCTGATTTGTAAACAGTACCCACCCTTTCCTTATCCTTAATTTTGTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAGTCTAGGATTGCAAGCAATTCGGAACCGNTTGATCTCCTGGTAGATATGTGCTAAGAAACGTGTAAAGACAAGCGATAGAAAATATCTAACCCATTTGCCACGAGATAGAGGCGGTGCGATGTGCGATGAGAGAAAGCGAAAACAGTGAAATCAACATACNACAATCACAATTACNAAACATTACCCTGCATAC]
[+] EMBL BX625338 [CTATCGAAGCCCAAAGCATTGGAAAAGAGTATTCTGTCGGGAACCAACATAGGGTGAAACAACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAAGATCGTCTTGGAGAGCAAACTACAAAAAGAAGAAAACAATACAAAAAGTAACAACATATATCCGCAAACGACACAACAAAATAGCGAAAAATGCAATAGCAATATAAAGATAAACAGTAAACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTATACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGCTTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACGAATGTATAAAAGCGTAGCTAGTACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCAATGCTACAATGCCGAGCCTGATTTGTAAACAGTACCCACCCTTTCCTTATCCTTAATTTTGTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAGTCTAGGATTGCAAGCAATTCGGAACCGNTTGATCTCCTGGTAGATATGTGCTAAGAAACGTGTAAAGACAAGCGATAGAAAATATCTAACCCATTTG ]
[+] EMBL BX624621 [ GGGTGAAACAACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAAGATCGTCTTGGAGAGCAAACTACAAAAAGAAGAAAACAATACAAAAAGTAACAACATATATCCGCAAACGACACAACAAAATAGCGAAAAATGCAATAGCAATATAAAGATAAACAGTAAACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTATACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGCTTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACGAATGTATAAAAGCGTAGCTAGTACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCAATGCTACAATGCCGAGCCTGATTTGTAAACAGTACCCACCCTTTCCTTATCCTTAATTTTGTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAGTCTAGGATTGCAAGCAATTCGGAACCGTTTGATCTCCTGTTAGATATGTGCTAAGAAACGTGTAAAGACAAGCGATAGAAAATATCTAACCCATTTGCCACGAGATAGAGGCGGTGCGATGTGCGATGAGAGAAAGCGAAAACAGTGAAATCAACATACNACAATCACAATTACNAAACATTACCCTGCATAC]
consensusID : consensus_3389#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence
[CACGCGTCCGGGAAAAGAGTATTCTGTCGGGAACCAACATAGGGTGAAACAACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAAGATCGTCTTGGAGAGCAAACTACGAAAGGAAGAAAACTATACCAAAGGTAACAACATATATCCGCAAACGACACAACAAAATAGCGAAAAATGCGATAGCAATATAAAGATAAACAGGAAACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTATACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGCTTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACGAATGTATAAAAGCGTAGCTAGGACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCAATGCTACAATGCCGAGCCTGATTTGTAAACAGGACCCACCCTTTCCTTATCCTTAATTTTGTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAGTCTAGGATTGCAAGCAATTCAGAACCGCTTGATCTCCTGTTAGATATGTGC]
[+] EMBL BM620486 [CACGCGTCCGGGAAAAGAGTATTCTGTCGGGAACCAACATAGGGTGAAACAACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAAGATCGTCTTGGAGAGCAAACTACGAAAGGAAGAAAACTATACCAAAGGTAACAACATATATCCGCAAACGACACAACAAAATAGCGAAAAATGCGATAGCAATATAAAGATAAACAGGAAACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTATACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGCTTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACGAATGTATAAAAGCGTAGCTAGGACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCAATGCTACAATGCCGAGCCTGATTTGTAAACAGGACCCACCCTTTCCTTATCCTTAATTTTGTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAGTCTAGGATTGCAAGCAATTCAGAACCGCTTGATCTCCTGTTAGATATGTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_3389#0 CTATCGAAGCCCAAAGCATTGGAAAAGAGTATTCTGTCGGGAACCAACATAGGGTGAAAC 60
consensus_3389#1 ----------CACGCGTCCGGGAAAAGAGTATTCTGTCGGGAACCAACATAGGGTGAAAC 50
* * ****************************************
consensus_3389#0 AACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAA 120
consensus_3389#1 AACATTTATCGTTACCATAGTCGAATAGCAAGAGTGGGCAGTAATGATAAGCGTTGAAAA 110
************************************************************
consensus_3389#0 GATCGTCTTGGAGAGCAAACTACAAAAAGAAGAAAACAATACAAAAAGTAACAACATATA 180
consensus_3389#1 GATCGTCTTGGAGAGCAAACTACGAAAGGAAGAAAACTATACCAAAGGTAACAACATATA 170
*********************** *** ********* **** *** *************
consensus_3389#0 TCCGCAAACGACACAACAAAATAGCGAAAAATGCAATAGCAATATAAAGATAAACAGTAA 240
consensus_3389#1 TCCGCAAACGACACAACAAAATAGCGAAAAATGCGATAGCAATATAAAGATAAACAGGAA 230
********************************** ********************** **
consensus_3389#0 ACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTA 300
consensus_3389#1 ACTCTCCTTTTCCTTCACTTTATCACACCTAGTGATTTCTTACCCAAAATTAATAATTTA 290
************************************************************
consensus_3389#0 TACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGC 360
consensus_3389#1 TACCGTAGAAGATATATTTTCTCAAAGAAAGTTCATAAAATTAGTAAACCTCCGATTTGC 350
************************************************************
consensus_3389#0 TTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACG 420
consensus_3389#1 TTTAGGGAACACTAAACGATGTGTTTATACAAAGGAAGCAAACGATGTCAGGAACCCACG 410
************************************************************
consensus_3389#0 AATGTATAAAAGCGTAGCTAGTACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCA 480
consensus_3389#1 AATGTATAAAAGCGTAGCTAGGACGCCTTCTGAGCGAAACAAATTTGCGCGCTAAACTCA 470
********************* **************************************
consensus_3389#0 ATGCTACAATGCCGAGCCTGATTTGTAAACAGTACCCACCCTTTCCTTATCCTTAATTTT 540
consensus_3389#1 ATGCTACAATGCCGAGCCTGATTTGTAAACAGGACCCACCCTTTCCTTATCCTTAATTTT 530
******************************** ***************************
consensus_3389#0 GTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAG 600
consensus_3389#1 GTTTTAGTGTATTGTTCTGTTGCGAGTATTGGTCCTTAGATGCGCGCGCGCGCGCGAGAG 590
************************************************************
consensus_3389#0 TCTAGGATTGCAAGCAATTCGGAACCGNTTGATCTCCTGGTAGATATGTGCTAAGAAACG 660
consensus_3389#1 TCTAGGATTGCAAGCAATTCAGAACCGCTTGATCTCCTGTTAGATATGTGC--------- 641
******************** ****** *********** ***********
consensus_3389#0 TGTAAAGACAAGCGATAGAAAATATCTAACCCATTTGCCACGAGATAGAGGCGGTGCGAT 720
consensus_3389#1 ------------------------------------------------------------
consensus_3389#0 GTGCGATGAGAGAAAGCGAAAACAGTGAAATCAACATACNACAATCACAATTACNAAACA 780
consensus_3389#1 ------------------------------------------------------------
consensus_3389#0 TTACCCTGCATAC 793
consensus_3389#1 -------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||