Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 3440 cluster # 3440       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3440#0 length = 1443 sequences # 3  

consensusID : consensus_3440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1443
fasta sequence
                              [CCGCACAATGGTAACCGATGAGAGCGGTGTTGAGATTGGACAATCGGATATGGACAGCAGTCGGGAAAGGAAGCAGCCCGATGATGCAAATGGTCCTGAAATGGCAAACACCACGGCAGCGATGCTAACAACTCCCATCCTGGACTCGGCACCCGCCGTCGAACAACCGTCCACTGGTACTGCAGCGGATCTTACGTCCCAGCCAGGTCTATCCAGCGCTGCTTCTGCCGCTTCCTCAGCGAACACAACCACCATGGTGAGTGGTTTGAAAAAGGGGCTGGTTGACTACGAAGGCGATTCCGACGACGAGGAAGAGGATGACGAGAGTAGTAGTCCCGCACAAAAGAAGGCGAGAATAGCATAGCATGATTCAGCTTCAACCGCGCACCCTCCTTATAAACAACGCCATCGATCAGCATCATCTGAGGCGGCGGATAGCATAACTATGGATAATTTTAATACTACTACTACTATTACTACTACTACC---ACTACTACTACTACTACAATTAGAACCAACACAACTACTACGAATGCGGCAGTAGCGGTGGCCAGCACTACAGATGCTCCCAATGCGATCCTTGTTTCTTCTGCTGTTA---CTGCTGCTGCTGCTGCTGTTGCTAGTAATTCCGCGTTTCGCAACGAATTACGCACAGCGTCGAATTCGCCATGCGAGACAGAGGCAAAGGCAGACGACAGTGGCGGCGTGCAGGATTGCAGGGGACGGTAGCGTACTGGCAAGGGATAGACTAGACTGTTCGAATATAATGGATATAGATATTACATTGACTACAGCTAACGGTAGCGATCCTCCTGCTGCTGTTGTAGCCGGCAGCCAAAACTCGATCGCTGAGAACTGAGGCTGTTTCGGAAAGCAAGCGGCTTTTTTGTAAAGGAAATGCGATTATCTCGTCTCATACATACATGCATGCGAAAAACACAAACGAAAGCCAACTCCACACGCTTTTTCATAACCATCCCGTGTGCCAGAGGGACATGGTGCGTTGGTGTGGTGTAGGTGCAGTACAAGCAAAATGAGACGAAAGACGTTAGATCGATACGATTAAAGTTTACTTGCTTTCTCGGCTTCCATCACCCCTCTCTTTTGCTCGGTTCGCAATCGTCCTTAAGGATGATGGATCGAGGTCCGGTTTGTATCACGCGACGAGGCAGGGTTCGTGGGTGGGTGTGGGAGCGAGATTTACTTGCTTGACGCGTTCTGGAGAGAGATATATGCGCAGTATATGCAGCACCTGGACTCATAATGTACAGTTAGTAATTGGATTCGTTTGTAAACATTCTAAGTTATATGCGGGGAGGACAAAAAGATCCCTCCTTAGCATCAGGCGCACCTCATCCCCACGGTGTTTCATTCGCATTCATTCGTGGACTGGGCTGTTGATCATTTTGCTAAACACACACACACACACACGCGCGCATAATAGT]

[+] EMBL BM617479             [CCGCACAATGGTAACCGATGAGAGCGGTGTTGAGATTGGACAATCGGATATGGACAGCAGTCGGGAAAGGAAGCAGCCCGATGATGCAAATGGTCCTGAAATGGCAAACACCACGGCAGCGATGCTAACAACTCCCATCCTGGACTCGGCACCCGCCGTCGAACAACCGTCCACTGGTACTGCAGCGGATCTTACGTCCCAGCCAGGTCTATCCAGCGCTGCTTCTGCCGCTTCCTCAGCGAACACAACCACCATGGTGAGTGGTTTGAAAAAGGGGCTGGTTGACTACGAAGGCGATTCCGACGACGAGGAAGAGGATGACGAGAGTAGTAGTCCCGCACAAAAGAAGGCGAGAATAGCATAGCATGATTCAGCTTCAACCGCGCACCCTCCTTATAAACAACGCCATCGATCAGCATCATCTGAGGCGGCGGATAGCATAACTATGGATAATTTTAATACTACTACTACTATTACTACTACTACCACTACTACTACTACTACTACAATTAGAACCAACACAACTACTACGAATGCGGCAGTAGCGGTGGCCAGCACTACAGATGCTCCCAATGCGATCCTTGTTTCTTCTGCTGTTA   CTGCTGCTGCTGCTGCTGTTGCTAGTAATTCCGCGTTTCGCAACGAATTACGCACAGCGTCGAATTCGCCATGCGAGACAGAGGCAAAGGCAGACGACAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM631242             [                                                                                                                                ccgCTCCCATCCTGGACTCGGCACCCGCCGTCGAACAACCGTCCACTGGTACTGCAGCGGATCTTACGTTTCAGCCAGGTCTATCCAGCGCTGCTTCTGCCGCTTCCTCAGCGAACACAACCACCATGGTGAGTGGTTTGAAAAAGGGGCTGGTTGACTACGAAGGCGATTCCGACGACGAGGAAGAGGATGACGAGAGTAGTAGTCCCGCACAAAAGAAGGCGAGAATAGCATAGCATGATTCAGCTTCAACCGCGCACCCTCCTTATAAACAACGCCATCGATCAGCATCATCTGAGGCGGCGGATAGCATAACTATGGATAATTTTAATACTACTACTACTATTACTACTACTACC   ACTACTACTACTACTACAATTAGAACCAACACAACTACTACGAATGCGGCAGTAGCGGTGGCCAGCACTACAGATGCTCCCAATGCGATCCTTGTTTCTTCTGCTGTTACTGCTGCTGCTGCTGCTGCTGTTGCTAGTAATTCCGCGTTTCGCAACGAATTACGCACAGCGTCGAATTCGCCATGCGATACAGAGGCAAAGGCAGACGACAGTGGCGGCGTGCAGGATTGCAGGGGACGGTAGCGTACTGGCAAGGGATAGACTAGACTGTTCGAATATAATGGATATAGATATTACATTGACTACAGCTAACGGTAGCGATCCTCCTGCTGCTGTTGTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX618415             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GACGACAGTGGCGGCGTGCAGGATTGCA GGGACGGTAGCGTACTGGCAAGGGATAGACTAGACTGTTCGAATATAATGGATATAGATATTACATTGACTACAGCTAACGGTAGCGATCCTCCTGCTGCTGTTGTAGCCGGCAGCCAAAACTCGATCGCTGAGAACTGAGGCTGTTTCGGAAAGCAAGCGGCTTTTTTGTAAAGGAAATGCGATTATCTCGTCTCATACATACATGCATGCGAAAAACACAAACGAAAGCCAACTCCACACGCTTTTTCATAACCATCCCGTGTGCCAGAGGGACATGGTGCGTTGGTGTGGTGTAGGTGCAGTACAAGCAAAATGAGACGAAAGACGTTAGATCGATACGATTAAAGTTTACTTGCTTTCTCGGCTTCCATCACCCCTCTCTTTTGCTCGGTTCGCAATCGTCCTTAAGGATGATGGATCGAGGTCCGGTTTGTATCACGCGACGAGGCAGGGTTCGTGGGTGGGTGTGGGAGCGAGATTTACTTGCTTGACGCGTTCTGGAGAGAGATATATGCGCAGTATATGCAGCACCTGGACTCATAATGTACAGTTAGTAATTGGATTCGTTTGTAAACATTCTAAGTTATATGCGGGGAGGACAAAAAGATCCCTCCTTAGCATCAGGCGCACCTCATCCCCACGGTGTTTCATTCGCATTCATTCGTGGACTGGGCTGTTGATCATTTTGCTAAACACACACACACACACACGCGCGCATAATAGT]


>consensus_3440#0 CCGCACAATGGTAACCGATGAGAGCGGTGTTGAGATTGGACAATCGGATATGGACAGCAG TCGGGAAAGGAAGCAGCCCGATGATGCAAATGGTCCTGAAATGGCAAACACCACGGCAGC GATGCTAACAACTCCCATCCTGGACTCGGCACCCGCCGTCGAACAACCGTCCACTGGTAC TGCAGCGGATCTTACGTCCCAGCCAGGTCTATCCAGCGCTGCTTCTGCCGCTTCCTCAGC GAACACAACCACCATGGTGAGTGGTTTGAAAAAGGGGCTGGTTGACTACGAAGGCGATTC CGACGACGAGGAAGAGGATGACGAGAGTAGTAGTCCCGCACAAAAGAAGGCGAGAATAGC ATAGCATGATTCAGCTTCAACCGCGCACCCTCCTTATAAACAACGCCATCGATCAGCATC ATCTGAGGCGGCGGATAGCATAACTATGGATAATTTTAATACTACTACTACTATTACTAC TACTACCACTACTACTACTACTACAATTAGAACCAACACAACTACTACGAATGCGGCAGT AGCGGTGGCCAGCACTACAGATGCTCCCAATGCGATCCTTGTTTCTTCTGCTGTTACTGC TGCTGCTGCTGCTGTTGCTAGTAATTCCGCGTTTCGCAACGAATTACGCACAGCGTCGAA TTCGCCATGCGAGACAGAGGCAAAGGCAGACGACAGTGGCGGCGTGCAGGATTGCAGGGG ACGGTAGCGTACTGGCAAGGGATAGACTAGACTGTTCGAATATAATGGATATAGATATTA CATTGACTACAGCTAACGGTAGCGATCCTCCTGCTGCTGTTGTAGCCGGCAGCCAAAACT CGATCGCTGAGAACTGAGGCTGTTTCGGAAAGCAAGCGGCTTTTTTGTAAAGGAAATGCG ATTATCTCGTCTCATACATACATGCATGCGAAAAACACAAACGAAAGCCAACTCCACACG CTTTTTCATAACCATCCCGTGTGCCAGAGGGACATGGTGCGTTGGTGTGGTGTAGGTGCA GTACAAGCAAAATGAGACGAAAGACGTTAGATCGATACGATTAAAGTTTACTTGCTTTCT CGGCTTCCATCACCCCTCTCTTTTGCTCGGTTCGCAATCGTCCTTAAGGATGATGGATCG AGGTCCGGTTTGTATCACGCGACGAGGCAGGGTTCGTGGGTGGGTGTGGGAGCGAGATTT ACTTGCTTGACGCGTTCTGGAGAGAGATATATGCGCAGTATATGCAGCACCTGGACTCAT AATGTACAGTTAGTAATTGGATTCGTTTGTAAACATTCTAAGTTATATGCGGGGAGGACA AAAAGATCCCTCCTTAGCATCAGGCGCACCTCATCCCCACGGTGTTTCATTCGCATTCAT TCGTGGACTGGGCTGTTGATCATTTTGCTAAACACACACACACACACACGCGCGCATAAT AGT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)