These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_3461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 368 fasta sequence [AGGCCAAGAATCCNGCACGATGGGAAATCCACTGTCCTAGATGTCAGATTATATGCATTATTATTAAAACAAGAAAAACACACACACACTGTGTCCCCCTATTCTCGTTGTTTGTGTAGATCAAGCAGCTTATCGGCTAAAATCACTTACACTCGGCAGGGGTTTGAGAAAAAGGAAATTATGTGAATGTGGAAATGTATGTCTCTTCCAATAACAACACCCTTTCAGTAAACCC----TATGTGTATGTGTATGCATGTGGATGGTACACGTGAACAAGAATGTGACAACTGACCGTTGAGGCTCAGATTGGTTCAAGAAAAGGATCTTTTAGTAAACCAATTGGTTAGATAAAAAAAAAAAAAAAAAAAA] [+] EMBL BX467209 [AGGCCAAGAATCCNGCACGATGGGAAATCCACTGTCCTAGATGTCAGATTATATGCATTATTATTAAAACAAGAAAAACACACACACACTGTGTCCCCCTATTCTCGTTGTTTGTGTAGATCAAGCAGCTTATCGGCTAAAATCACTTACACTCGGCAGGGGTTTGAGAAAAAGGAAATTATGTGAATGTGGAAATGTATGTCTCTTCCAATAACAACACCCTTTCAGTAAACCC TATGTGTATGTGTATGCATGTGGATGGTACACGTGAACAAGAATGTGACAACTGACCGTTGAGGCTCAGATTGGTTCAAGAAAAGGATCTTTTAGTAAACCAATTGGTTAGATAAAAAAAAAAAAAAAAAAAA] [+] EMBL BM585741 [ AGAAGAA A AAACACACTGTGTCCCCCTATTCTCGTTGTTTGTGTAGATCAAGCAGCTTGTCGGCTAAAATCACTTACACTCGGCAGGGGTTTGAGAAAAAGGAAATTATGTGAATGTGGAAATGAATGTCTCTTCCAATAAGAACACCCTTTCAGTAAACCCTATGTATGTGTGTGTGTATGCATGTGTA CGTACACGTGAACAAGAATGTGACAACTGACCGTTGAGGCTCAGATTGGTTCAAGAAAAGGAACTTTTAGTAAACCAATT GTTAGAT ] consensusID : consensus_3461#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 282 fasta sequence [AAAAAAAAAANTGTGTCCCCCTATTCTCGTTGTTTGTGTAGATCAAGCAGCTTTTCGGCTAAAATAACTAAAACTCSGCAGGGGTTTGAGAAAAAGGAAATTATGTGAATGTGGAAATNAATSTCTCTTCCAATAAAAAAACCCTTTCAGTAAACCCTATGTATGTGTGTGTGTATGCATGTGTANGTAAACGTGAACAAGAATGTAACAACGAACGATGAGGTTCAGATTGCTTCAAGAAAAGGAACTTTTAGTAAACCAATTGTTAGATAAAAAAAAAAA] [-] EMBL AGA281521 [AAAAAAAAAANTGTGTCCCCCTATTCTCGTTGTTTGTGTAGATCAAGCAGCTTTTCGGCTAAAATAACTAAAACTCSGCAGGGGTTTGAGAAAAAGGAAATTATGTGAATGTGGAAATNAATSTCTCTTCCAATAAAAAAACCCTTTCAGTAAACCCTATGTATGTGTGTGTGTATGCATGTGTANGTAAACGTGAACAAGAATGTAACAACGAACGATGAGGTTCAGATTGCTTCAAGAAAAGGAACTTTTAGTAAACCAATTGTTAGATAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_3461#0 AGGCCAAGAATCCNGCACGATGGGAAATCCACTGTCCTAGATGTCAGATTATATGCATTA 60 consensus_3461#1 ------------------------------------------------------------ consensus_3461#0 TTATTAAAACAAGAAAAACACACACACACTGTGTCCCCCTATTCTCGTTGTTTGTGTAGA 120 consensus_3461#1 ------------------AAAAAAAAAANTGTGTCCCCCTATTCTCGTTGTTTGTGTAGA 42 * * * * * ******************************* consensus_3461#0 TCAAGCAGCTTATCGGCTAAAATCACTTACACTCGGCAGGGGTTTGAGAAAAAGGAAATT 180 consensus_3461#1 TCAAGCAGCTTTTCGGCTAAAATAACTAAAACTCSGCAGGGGTTTGAGAAAAAGGAAATT 102 *********** *********** *** * **** ************************* consensus_3461#0 ATGTGAATGTGGAAATGTATGTCTCTTCCAATAACAACACCCTTTCAGTAAACCCTATGT 240 consensus_3461#1 ATGTGAATGTGGAAATNAATSTCTCTTCCAATAAAAAAACCCTTTCAGTAAACCCTATGT 162 **************** ** ************* ** ********************** consensus_3461#0 GTATGTGTATGCATGTGGATG---GTACACGTGAACAAGAATGTGACAACTGACCGTTGA 297 consensus_3461#1 ATGTGTGTGTGTATGCATGTGTANGTAAACGTGAACAAGAATGTAACAAC-GAACGATGA 221 * ***** ** *** ** *** **************** ***** ** ** *** consensus_3461#0 GGCTCAGATTGGTTCAAGAAAAGGATCTTTTAGTAAACCAATTGGTTAGATAAAAAAAAA 357 consensus_3461#1 GGTTCAGATTGCTTCAAGAAAAGGAACTTTTAGTAAACCAATTG-TTAGATAAAAAAAAA 280 ** ******** ************* ****************** *************** consensus_3461#0 AAAAAAAAAAA 368 consensus_3461#1 AA--------- 282 ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||