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Anopheles gambiae
cluster # 3761 cluster # 3761       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3761#0 length = 954 sequences # 1  
consensus_3761#1 length = 867 sequences # 2  

consensusID : consensus_3761#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 954
fasta sequence
                              [AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATATTATATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCTTTGCATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATTTCCAACTCTCTGCCGGGCTAGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCCCCNAAAACCTGGGCGAACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTCACCGANATANGACGGTAAANAGCTTGAGACCNACTGCTTTAGCGNGNGTTACGANGAGCGNGCGGGNAGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGCGAGCAGNCCGNNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGGGNTNANCNAGCGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGTGGACGGGGGGGAANCGAAAGACCGGCGGNGGNTGGCAGGAACNCGGAGGCGGGAAAAAAACAGNCGGNGGCGGGCCCCACGNCTAGGGACGCGNGACCCNCCAGNGNNCGNGAAGGGCAAGAGACTGCTGGGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCNCGAGCAGGCNGGAAAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAGGCGCGCNGCCCCGCGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGCCGGNCCA]

[+] EMBL BX466564             [AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATATTATATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCTTTGCATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATTTCCAACTCTCTGCCGGGCTAGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCCCCNAAAACCTGGGCGAACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTCACCGANATANGACGGTAAANAGCTTGAGACCNACTGCTTTAGCGNGNGTTACGANGAGCGNGCGGGNAGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGCGAGCAGNCCGNNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGGGNTNANCNAGCGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGTGGACGGGGGGGAANCGAAAGACCGGCGGNGGNTGGCAGGAACNCGGAGGCGGGAAAAAAACAGNCGGNGGCGGGCCCCACGNCTAGGGACGCGNGACCCNCCAGNGNNCGNGAAGGGCAAGAGACTGCTGGGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCNCGAGCAGGCNGGAAAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAGGCGCGCNGCCCCGCGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGCCGGNCCA]


>consensus_3761#0 AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATATTAT ATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCA GCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGC AAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCTTTG CATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATTTCC AACTCTCTGCCGGGCTAGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCCCCNA AAACCTGGGCGAACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTCACCGANA TANGACGGTAAANAGCTTGAGACCNACTGCTTTAGCGNGNGTTACGANGAGCGNGCGGGN AGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGCGAGCAGNCCG NNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGGGNTNANCNAG CGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGTGGACGGGGGG GAANCGAAAGACCGGCGGNGGNTGGCAGGAACNCGGAGGCGGGAAAAAAACAGNCGGNGG CGGGCCCCACGNCTAGGGACGCGNGACCCNCCAGNGNNCGNGAAGGGCAAGAGACTGCTG GGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCNCGAGCAGGCNGGA AAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAGGCGCGCNGCCCCG CGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGCCGGNCCA



consensusID : consensus_3761#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 867
fasta sequence
                              [CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATATTTATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAAATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACTTCTCACGCAGTACCAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGGAGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGCCCCAAACTGCGACACGAGAACAGAATCAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGACACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCGCGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCATTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTTTGCAGAATCGACTGTGCGTGTGAATGTGTGTCTACAACTAGTCGGGTTGAAATTCGCAAGCATTCTGCGCATGGTAAGAAATGACTGGATCGAGAAAAAAAACTCCTCATATTAAATCGAACGTTCCAAAATAATAATAATAACGTACAACCGAACGAAGCAGACGCCCAGCCGAGGGACGCGCTCCCCAATGCAATGGTTGGATTT]

[+] EMBL BM606720             [CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATATTTATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAAATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAAACTTCTCACGCAGTACCAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGGAGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGCCCCAAACTGCGACACGAGAACAGAATCAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGACACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCGCGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCATTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTTTGCAGAATCGAC                                                                                                                                                                                                   ]
[+] EMBL BX620154             [                                                                                                                                                                                                 TACTAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGGAGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGTCCCAAACTGCGACACGAGAACAGAAACAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGACACGAGCAAACG  AAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCGCAGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCATTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACC TTGGCATTGTTTGCAGAATCGACTGTGCGTGTGAATGTGTGTCTACAACTAGTCGGGTTGAAATTCGCAAGCATTCTGCGCATGGTAAGAAATGACTGGATCGAGAAAAAAAACTCCTCATATTAAATCGAACGTTCCAAAATAATAATAATAACGTACAACCGAACGAAGCAGACGCCCAGCCGAGGGACGCGCTCCCCAATGCAATGGTTGGATTT]


>consensus_3761#1 CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATATTTATAACCTCATAGATCCTCAGC GTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCACCAGCAGCTGAAATAGAGGCACTC AAAGCAACACGAAGGTTCACATTTAATACTGGCCCGGCAAACAGGACGCCACAGAGCGAA ACTTCTCACGCAGTACCAGTTAGGTTAGGTTTGCATGGCCCCCCAAGGGCCCCATGGAGG AGGAGGAGTGAGCGAACCACCAATTTCCAATCTCTGCCGGGTGGAGAGCAGTAGGATTGT GCGCCCCAAACTGCGACACGAGAACAGAATCAGAATATTTCACGAATTAATAAGTTAACA CTCTTACGGGTAAACAAGAGACACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTG CCGCACGGCGGGTACTTAAGCGCGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGC ACTGTTTTAGATAGAATTTACAATGCAAACACGGCAACGATTCGTATACCACTTGCGCCA TTTGCGCTTTTGTGCGCCGGGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATC GTGACTTGACGCATGCCAGAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTT TGCAGAATCGACTGTGCGTGTGAATGTGTGTCTACAACTAGTCGGGTTGAAATTCGCAAG CATTCTGCGCATGGTAAGAAATGACTGGATCGAGAAAAAAAACTCCTCATATTAAATCGA ACGTTCCAAAATAATAATAATAACGTACAACCGAACGAAGCAGACGCCCAGCCGAGGGAC GCGCTCCCCAATGCAATGGTTGGATTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3761#0      AGGCAGAATCCGCACGATGTATCCTCTTCCCCCCCCGTTGTTGACCCGGTGACATAT--- 57
consensus_3761#1      ------------------------CCGGCGATCGGAAAAATCGAACCGAAAGCGTGCATA 36
                                               *  *   *       * ** ***    * *     

consensus_3761#0      TATATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCA 117
consensus_3761#1      TTTATAACCTCATAGATCCTCAGCGTCCTAGGGCCAAACAGGTTGTGGGATTACGACCCA 96
                      * **********************************************************

consensus_3761#0      CCAGCAGCTGAACATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCC 177
consensus_3761#1      CCAGCAGCTGAA-ATAGAGGCACTCAAAGCAACACGAAGGTTCACATTTAATACTGGCCC 155
                      ************ ***********************************************

consensus_3761#0      GGCAAACAGGACGCCACAGAGCGAAACGTTCTCACGCAGGTACCAGGTTAGGNTTAGGCT 237
consensus_3761#1      GGCAAACAGGACGCCACAGAGCGAAAC-TTCTCACGCAG-TACCAG--TTAGGTTAGG-T 210
                      *************************** *********** ******  *  * ***** *

consensus_3761#0      TTGCATGGCCCCCCAAGGGCCCCATGGGANNCGAGCGAGGAGCTGAGCGAACCACCAATT 297
consensus_3761#1      TTGCATGGCCCCCCAAGGGCCCCATGGAGGAGG----AGGAG-TGAGCGAACCACCAATT 265
                      ***************************     *    ***** *****************

consensus_3761#0      TCCAACTCTCTGCCGGGCT-AGGGCAGCAGGCGAGATAGCGAAATTTGGTGGCGGNCCCC 356
consensus_3761#1      TCCAA-TCTCTGCCGGGTGGAGAGCAGTAGGATTGTGCGCCCCAAACTGCGAC--ACGAG 322
                      ***** ***********   ** **** ***   *   **   *    * * *   *   

consensus_3761#0      CCNAAAACCTGGGCGA---ACNAACGAACGAACCGACGCAAATTCAGGACAGTACTGTTC 413
consensus_3761#1      AACAGAATCAGAATATTTCACGAATTAATAAGTTAACACTCTTACGGGTAAACAAGAGAC 382
                         * ** * *        ** **  **  *    ** *   * * **  *  *     *

consensus_3761#0      ACCGANATANGACGGTAAANAGCTTGAGACCN--ACTGCTTTAGCGNGNGTTACGANGAG 471
consensus_3761#1      ACGAGCAAACGAAAAAAAAAAACAACAATTCGCGGGTGCCGCACGGCGGGTACTTAAGCG 442
                      **    * * **    *** * *   *   *     ***   *  * * **    * * *

consensus_3761#0      CGNG-CGGGNAGGAACAACCGAGCGCCGNGAGACGGGCGCAGCGCGACGCAGCGNTGGGC 530
consensus_3761#1      CGGAACCGAATCGGACAACTATTTAAGAGGAAAGGCGCACTGTTTTAGATAGAATTTACA 502
                      **   * *    * *****          ** * * ** * *    *   **   *    

consensus_3761#0      GAGCAGNCCGNNGCTTCTGCGNCCTGGNGGNTNGGCNCNGGCNNNGANCGGNGAGCGGGG 590
consensus_3761#1      ATGCAAAC--ACGGCAACGATTCGTATACCACTTGCGCCATTTGCG-CTTTTGTGCGCCG 559
                        ***  *    *     *   * *         ** *       *      * ***  *

consensus_3761#0      GNTNANCNAGCGAGAGNGGGNGGGCGGGCGGGNGGGTCAGGGGANCCCGCCGAAGNGAGT 650
consensus_3761#1      GGTTTGTTTACAAACCGCGAGCTCTCACCCGGTACGTCATCGTGACTTGACGCA-TGCCA 618
                      * *       * *     *         * **   ****  *   *  * ** *  *   

consensus_3761#0      GGACGGGGGGGAANCGAAAGACCGGCGGNGGNTGGCAG-GAACNCGGAGGCGGGAAAAAA 709
consensus_3761#1      GAACGGGACACAACACAACCTCTACTTACCTTTGGCATTGTTTGCAGAATCG---ACTGT 675
                      * *****    **   **   *          *****  *    * **  **   *    

consensus_3761#0      ACAGNCGGNGGCGGGCCCCACGNCTAGGGACGC-GNGACCCNCCAGNGNNC-GNGAAGGG 767
consensus_3761#1      GCGTGTGAATGTGTGTCT-ACAACTAGTCGGGTTGAAATTCGCAAGCATTCTGCGCATGG 734
                       *    *   * * * *  **  ****    *  *  *  * * **    * * * * **

consensus_3761#0      CAAGAGACTGCTGGGAGGCCCAACAGGGGGGGNCGGCAGCACGGCAANGNCGCGGGCGCN 827
consensus_3761#1      TAAGAAATGACTGGA----TCGAGAAAAAAAACT--CCTCATATTAAA-TCGAACGTTCC 787
                       **** *   ****      * * *           *  **    **   **   *  * 

consensus_3761#0      CGAGCAGGCNGGAAAGCGTGGGGCGNGACGGAAAGTGGGNNGCCCGAGCGCGTAGGANAG 887
consensus_3761#1      AAAATAATAATAATAACGTACAACCGAACGAAGC---AGACGCCCAGCCG------AGGG 838
                        *  *      * * ***    *   *** *      *  ****   **      *  *

consensus_3761#0      GCGCGCNGCCCCGCGCCGGGACGGTNNCGNGACCNCAGNCAGAGGCAGGACCANGGANGC 947
consensus_3761#1      ACGCGCTCCCCAATGCAATGGTTGGATTT------------------------------- 867
                       *****  ***   **   *   *                                    

consensus_3761#0      CGGNCCA 954
consensus_3761#1      -------
                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)