cluster # 3795

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 3795 cluster # 3795 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3795#0 length = 735 sequences # 2

consensus_3795#1 length = 575 sequences # 1

consensusID : consensus_3795#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 735
fasta sequence

                              [AGGCAAGAACNCCGGCACGTAGNGATTTCTTCCAGTTTTCAACTCATAAGCATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCGTTCAAGGCAGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCTAGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCGGAACCGTTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGGGGCAGGTGATCGGGTAATGGCGTCACTTGCACGAGCACTATCGGCGGGGTGCTGTCGGCGAAGCGGAGTTGGAAAGCATTCATTCCCGGGCCGACGTGGGCAACGGGTTCGTGCGGCTTGGTGGAGCTGCTGGTACCGGCCCCTAATCCCGGTAGAGTTGGCGCCCCNGCNGCGCAAGTGGAACGATTAACCGGGCGGCATATA]

[+] EMBL BX467539             [AGGCAAGAACNCCGGCACGTAGNGATTTCTTCCAGTTTTCAACTCATAAGCATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCGTTCAAGGCAGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCTAGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCGGAACCGTTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGGGGCAGGTGATCGGGTAATGGCGTCACTTGCACGAGCACTATCGGCGGGGTGCTGTCGGCGAAGCGGAGTTGGAAAGCATTCATTCCCGGGCCGACGTGGGCAACGGGTTCGTGCGGCTTGGTGGAGCTGCTGGTACCGGCCCCTAATCCCGGTAGAGTTGGCGCCCCNGCNGCGCAAGTGGAACGATTAACCGGGCGGCATATA]
[+] EMBL BM606516             [                         TTTCTTCCAGTTTTCAACTCATAAGCATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCGTTCAAGGCAGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGTGGACGCTAGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCGGAACCG TATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGGGGCA GTGATCGGGT ATGGCGTCACTTGCACGACCACTATCGGC GGGTGCT                                                                                                                                                       ]




>consensus_3795#0
AGGCAAGAACNCCGGCACGTAGNGATTTCTTCCAGTTTTCAACTCATAAGCATCCGGCTC
TATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTCCTCCAAA
GTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATCCGCTGCT
GCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGCACCTTTG
TACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTGGCCGAGC
ACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCGTTCAAGG
CAGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCTAGGGCGTCCG
GTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCGGAACCGTT
ATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGGGGCAGGTGA
TCGGGTAATGGCGTCACTTGCACGAGCACTATCGGCGGGGTGCTGTCGGCGAAGCGGAGT
TGGAAAGCATTCATTCCCGGGCCGACGTGGGCAACGGGTTCGTGCGGCTTGGTGGAGCTG
CTGGTACCGGCCCCTAATCCCGGTAGAGTTGGCGCCCCNGCNGCGCAAGTGGAACGATTA
ACCGGGCGGCATATA

consensusID : consensus_3795#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence

                              [CCCGAGGTTAAATAAAAAGTTTCATTCCTGTAATTTCTTCAGTTTTCAACTCATAAGCATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCGTTCAAGGCAGGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCTAGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCCGGAACCGTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGCGGCAGTGATCGCGGTATGGCCGTCACTTGCCCGACC]

[+] EMBL AL694108             [CCCGAGGTTAAATAAAAAGTTTCATTCCTGTAATTTCTTCAGTTTTCAACTCATAAGCATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCGTTCAAGGCAGGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCTAGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCCGGAACCGTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGCGGCAGTGATCGCGGTATGGCCGTCACTTGCCCGACC]




>consensus_3795#1
CCCGAGGTTAAATAAAAAGTTTCATTCCTGTAATTTCTTCAGTTTTCAACTCATAAGCAT
CCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCCTC
CTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGATC
CGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGAGC
ACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTACTG
GCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGCCG
TTCAAGGCAGGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCTAG
GGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTGCC
GGAACCGTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAGCG
GCAGTGATCGCGGTATGGCCGTCACTTGCCCGACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_3795#0      ---------AGGCAAGAACNCCGGCACGTAGNGATTTCTTCCAGTTTTCAACTCATAAGC 51
consensus_3795#1      CCCGAGGTTAAATAAAAAGTTTCATTCCT-GTAATTTCTTC-AGTTTTCAACTCATAAGC 58
                               *   ** **        * * *  ******** ******************

consensus_3795#0      ATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCC 111
consensus_3795#1      ATCCGGCTCTATCTGGCGTATTTGAACACGGAGTTTTTAACTCCCCTTCACCCACCGTCC 118
                      ************************************************************

consensus_3795#0      TCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGA 171
consensus_3795#1      TCCTCCAAAGTGCACCAACGATGGATGCGTCAACCATGCTGGAGCGTGCGACGGAACTGA 178
                      ************************************************************

consensus_3795#0      TCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGA 231
consensus_3795#1      TCCGCTGCTGCAAGGTACCACGGCTGATGACCAGCATCGAGGAGGGTCCCCTAGACCGGA 238
                      ************************************************************

consensus_3795#0      GCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTAC 291
consensus_3795#1      GCACCTTTGTACAGTTTCTGCACGTGCTGGAAGCGACGCTACCGGCGGTGTTTGATCTAC 298
                      ************************************************************

consensus_3795#0      TGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGC 351
consensus_3795#1      TGGCCGAGCACGGCACCCTACTGACCGGGTACGACGAGTACAACGAGGATGATAACGTGC 358
                      ************************************************************

consensus_3795#0      CGTTCAAGGCAGGG-CTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCT 410
consensus_3795#1      CGTTCAAGGCAGGGGCTGGTGCTTGTGATAGCTGAACAGTACAGCGAAGCAGGCGACGCT 418
                      ************** *********************************************

consensus_3795#0      AGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTG 470
consensus_3795#1      AGGGCGTCCGGTGAGGATGCATCCCACGGCGAGGAGTATCGCACCGGCACGCCAGCGCTG 478
                      ************************************************************

consensus_3795#0      CGGAACCGTTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAG 530
consensus_3795#1      CCGGAACCGTATCGCACAGTTCTGCCAGGGCCACGAACTGGAGCATCTGCTGACTGACAG 538
                      * * * *  ***************************************************

consensus_3795#0      GGGCAGGTGATCGGGTAATGGC-GTCACTTGCACGAGCACTATCGGCGGGGTGCTGTCGG 589
consensus_3795#1      CGGCAG-TGATCGCGGTATGGCCGTCACTTGCCCGACC---------------------- 575
                       ***** ****** *  ***** ********* *** *                      

consensus_3795#0      CGAAGCGGAGTTGGAAAGCATTCATTCCCGGGCCGACGTGGGCAACGGGTTCGTGCGGCT 649
consensus_3795#1      ------------------------------------------------------------
                                                                                  

consensus_3795#0      TGGTGGAGCTGCTGGTACCGGCCCCTAATCCCGGTAGAGTTGGCGCCCCNGCNGCGCAAG 709
consensus_3795#1      ------------------------------------------------------------
                                                                                  

consensus_3795#0      TGGAACGATTAACCGGGCGGCATATA 735
consensus_3795#1      --------------------------