These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4081#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGCCTCGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCGCTGCCACCGAACGCGATGGGCGTGTCGGATTACGGTGACGTGGCGATGAGGCTGTTCTCCTTTCTGCTGCAGAACGACGACATGCCGCTACTGTTTACCGACGAGACCGATGTGCCCCGGGTGGAAAGCATGCTGGAGCACATTCTGAGCGACCATCTCAGCGAGATTGAGCTGCGCATCTGCCCGCTGGCGGAGCTGTTCTTCCGGCTGAAGCAAAACGTCGAGCTGTACATGATGGACCAGACCACCTTCCCGTCCGTGTACATTGCGCAGCAAATCATCACCAAGGACGTGTACGACTACACCAAGGGCATCAGCTGCGACTACCACGAGGAGAAGGACAACGTGCTGTACTGCCCGCTGTCCCGGTGCATCCGCTGGGCGTACATCATCTCGGATAACTGCTGCCAGGACATGGGCATCGAGCCGATTCCCGGGAAGCATGTGCCGCTGAACGCCAACACCAACCCGACC] [+] EMBL BM590198 [CCGCCCACGCGTCCGCCCACGCGTCCGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGCCTCGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCGCTGCCACCGAACGCGATGGGCGTGTCGGATTACGGTGACGTGGCGATGAGGCTGTTCTCCTTTCTGCTGCAGAACGACGACATGCCGCTACTGTTTACCGACGAGACCGATGTGCCCCGGGTGGAAAGCATGCTGGAGCACATTCTGAGCGACCATCTCAGCGAGATTGAGCTGCGCATCTGCCCGCTGGCGGAGCTGTTCTTCCGGCTGAAGCAAAACGTCGAGCTGTACATGATGGACCAGACCACCTTCCCGTCCGTGTACATTGCGCAGCAAATCATCACCAAGGACGTGTACGACTACACCAAGGGCATCAGCTGCGACTACCACGAGGAGAAGGACAACGTGCTGTACTGCCCGCTGTCCCGGTGCATCCGCTGGGCGTACATCATCTCGGATAACTGCTGCCAGGACATGGGCATCGAGCCGATTCCCGGGAAGCATGTGCCGCTGAACGCCAACACCAACCCGACC] consensusID : consensus_4081#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 634 fasta sequence [CCGGGTCAATTCCTGTTGAATTCACAGAAGAGGCAGTTGCTATCGGTGTACAACATTTACTAAACTCATTTACCGCAAACCCACACATCGAAAAACAAAAATGCCGAAAAAGAACGGTTTCTTTTATTTTATGCTCGACTACAAGAAGCGCGAGGAGGCCAAGGGACGAAAGTTCAGCGGCCTGGATCAGGTGGCACCCATTGCCGGCGAAGTATGGAAGAAAATGAACGCCCAGCAGCGTGAACCGTACAACGTGCAGGCGAAGCAGGACGTGTTAAACACGAGCGGTGGCAAGGGCAAGATAACCAACATTGGCATACCGATCAGCGAAATTACGCAGGAAAAACGCGACCGGGAGAGCAAAGCGGAACGGCTGAAAAAGCTCGTCAGCACGCTGGTGATGAATGCTGCATCGAAAAATGTGCTTGAAAAGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGTCTCGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCG] [+] EMBL BM587171 [CCGGGTCAATTCCTGTTGAATTCACAGAAGAGGCAGTTGCTATCGGTGTACAACATTTACTAAACTCATTTACCGCAAACCCACACATCGAAAAACAAAAATGCCGAAAAAGAACGGTTTCTTTTATTTTATGCTCGACTACAAGAAGCGCGAGGAGGCCAAGGGACGAAAGTTCAGCGGCCTGGATCAGGTGGCACCCATTGCCGGCGAAGTATGGAAGAAAATGAACGCCCAGCAGCGTGAACCGTACAACGTGCAGGCGAAGCAGGACGTGTTAAACACGAGCGGTGGCAAGGGCAAGATAACCAACATTGGCATACCGATCAGCGAAATTACGCAGGAAAAACGCGACCGGGAGAGCAAAGCGGAACGGCTGAAAAAGCTCGTCAGCACGCTGGTGATGAATGCTGCATCGAAAAATGTGCTTGAAAAGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGTCTCGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCG] consensusID : consensus_4081#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 627 fasta sequence [CCGCCCACGCGTCCGGCAGTTGCTATCGGTGTACAACATTTACTAAACTCATTTACCGCAAACCCACACATCGAAAAACAAAAATGCCGAAAAAGAACGGTTTCTTTTATTTTATGCTCGACTACAAGAAGCGCGAGGAGGCCAAGGGACGAAAGTTCAGCGGCCTGGATCAGGTGGCACCCATTGCCGGCGAAGTATGGAAGAAAATGAACGCCCAGCAGCGTGAACCGTACAACGTGCAGGCGAAGCAGGACGTGTTAAACACGAGCGGTGGCAAGGGCAAGATAACCAACATTGGCATACCGATCAGCGAAATTACGCAGGAAAAACGCGACCGGGAGAGCAAAGCGGAACGGCTGAAAAAGCTCGTCAGCACGCTGGTGATGAATGCTGCATCGAAAAATGTGCTTGAAAAGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGTCTCGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCGCTGCCACCGA] [+] EMBL BM649243 [CCGCCCACGCGTCCGGCAGTTGCTATCGGTGTACAACATTTACTAAACTCATTTACCGCAAACCCACACATCGAAAAACAAAAATGCCGAAAAAGAACGGTTTCTTTTATTTTATGCTCGACTACAAGAAGCGCGAGGAGGCCAAGGGACGAAAGTTCAGCGGCCTGGATCAGGTGGCACCCATTGCCGGCGAAGTATGGAAGAAAATGAACGCCCAGCAGCGTGAACCGTACAACGTGCAGGCGAAGCAGGACGTGTTAAACACGAGCGGTGGCAAGGGCAAGATAACCAACATTGGCATACCGATCAGCGAAATTACGCAGGAAAAACGCGACCGGGAGAGCAAAGCGGAACGGCTGAAAAAGCTCGTCAGCACGCTGGTGATGAATGCTGCATCGAAAAATGTGCTTGAAAAGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGTCTCGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCGCTGCCACCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4081#1 -----------------------------------------------CCGGGTCAATTCC 13 consensus_4081#2 ------------------------------------------------------------ consensus_4081#0 CCGCCCACGCGTCCGCCCACGCGTCCGCAAGAGTTTTACTTCATTTCCATGGCCTACTTC 60 consensus_4081#1 TGTTGAATTCACAGAAGAGGCAGT-TGCTATCGGTGTACAACATTTACTAAACTCATTTA 72 consensus_4081#2 ----CCGCCCACGCGTCCGGCAGT-TGCTATCGGTGTACAACATTTACTAAACTCATTTA 55 consensus_4081#0 TGTCGGACGAACACTGGCGTCCATCTGCCGGCCGAGC-TGGCCGTCGTGCGGTACAGCCT 119 ** * * * *** * * * * * ** consensus_4081#1 CCGCAAACCCACACATCGAAAAACAAAAATGCCGAAAAAGAACGGTTTCTTTTATTTTAT 132 consensus_4081#2 CCGCAAACCCACACATCGAAAAACAAAAATGCCGAAAAAGAACGGTTTCTTTTATTTTAT 115 consensus_4081#0 CGAGGGTGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGG 179 * * * * ** * *** * ** ** * * consensus_4081#1 GCTCGACTACAAGAAGCGCGAGGAGGCCAAGG--GACGA--AAGTTCAGCGGCC--TGGA 186 consensus_4081#2 GCTCGACTACAAGAAGCGCGAGGAGGCCAAGG--GACGA--AAGTTCAGCGGCC--TGGA 169 consensus_4081#0 GATGGCGTACGATGCGCAGCGGCACGCCGAGGAGGACCACCAGCTGCCGCTGCCACCGAA 239 * * * *** * ** * * *** *** *** * * * * ** *** * * consensus_4081#1 TCAGGTGG---CACCCATTGCCGGCGAAGTATGGAAGAAAATGAACGCCCAGCAGC-GTG 242 consensus_4081#2 TCAGGTGG---CACCCATTGCCGGCGAAGTATGGAAGAAAATGAACGCCCAGCAGC-GTG 225 consensus_4081#0 CGCGATGGGCGTGTCGGATTACGGTGACGTGGCGATGAGGCTGTTCTCCTTTCTGCTGCA 299 * *** * * *** ** ** ** ** ** * ** * ** * consensus_4081#1 AACCGTACAACGTGCAGGCGAAGCAG---GACGTGTTAAACACGAGCGGTGGCAAGGGCA 299 consensus_4081#2 AACCGTACAACGTGCAGGCGAAGCAG---GACGTGTTAAACACGAGCGGTGGCAAGGGCA 282 consensus_4081#0 GAACG-ACGACATGCCGCTACTGTTTACCGACGAGACCGATGTGCCCCGGGTGGAAAGCA 358 * ** ** ** *** * * **** * * * * * * * *** consensus_4081#1 AGATAACCAACATT---GGCATACCGATCAGCGAAATTACGCAGGAAAAACGCG-ACCGG 355 consensus_4081#2 AGATAACCAACATT---GGCATACCGATCAGCGAAATTACGCAGGAAAAACGCG-ACCGG 338 consensus_4081#0 TGCTGGAGCACATTCTGAGCGACCATCTCAGCGAGATTGAGCTGCGCATCTGCCCGCTGG 418 * * ***** ** * ******* *** ** * * ** * ** consensus_4081#1 GAGAGCAAAGCGGAACGGCTGAAAAAGCTCGTCAGCACGCTGGTGATGAAT---GCTGCA 412 consensus_4081#2 GAGAGCAAAGCGGAACGGCTGAAAAAGCTCGTCAGCACGCTGGTGATGAAT---GCTGCA 395 consensus_4081#0 CGGAGCTGTTCTTC-CGGCTGAAGCAAAACGTCGAGCTGTACATGATGGACCAGACCACC 477 **** * ******** * **** * ***** * * * consensus_4081#1 TCGAAAAATGTGCTTGAAAAGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGG 472 consensus_4081#2 TCGAAAAATGTGCTTGAAAAGCAAGAGTTTTACTTCATTTCCATGGCCTACTTCTGTCGG 455 consensus_4081#0 TTCCCGTCCGTGTACATTGCGCAGCAAATCATCACCAAGGACGTG---TACGACTACACC 534 * *** *** * * * ** * ** *** ** consensus_4081#1 ACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGTCT-CGAGGG 531 consensus_4081#2 ACGAACACTGGCGTCCATCTGCCGGCCGAGCTGGCCGTCGTGCGGTACAGTCT-CGAGGG 514 consensus_4081#0 AAGGGCATCAGCTGCGACTACCACGAGGAGAAGGACAACGTGCTGTACTGCCCGCTGTCC 594 * * ** ** * * * * *** ** * ***** **** * * * consensus_4081#1 TGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGC 591 consensus_4081#2 TGGCGTAAAGGACAAGCTCCACATGTTCATCAATCCGGGCCGGCTGCCGATCGGGATGGC 574 consensus_4081#0 CGGTGCATCCGCTGGGCGT-ACATCATCTCGGATAACTGCTGCCAGGACATGGGCATCGA 653 ** * * * ** **** ** ** ** * * * ** ** ** * consensus_4081#1 GTACGATGCGCAGCGGCACG--CCGAGGAGGACCACCAGCTGCCG---------- 634 consensus_4081#2 GTACGATGCGCAGCGGCACG--CCGAGGAGGACCACCAGCTGCCGCTGCCACCGA 627 consensus_4081#0 GCCGATTCCCGGGAAGCATGTGCCGCTGAACGCCAACACCAACCCGACC------ 702 * * * * *** * *** ** *** ** * ** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||