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Anopheles gambiae
cluster # 4342 cluster # 4342       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4342#0 length = 1510 sequences # 3  

consensusID : consensus_4342#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1510
fasta sequence
                              [CTTTTAATCGGACGCGTAGCGAAAAGGTTTGATCGTTTACCCCACAAACTAGACCGTTTGTGCTCGTGATCGTGAGTATGGCAGAACCGTCCCACGGGTCCGCCCAAAACACCAACGACAGCTTGATCGCGATGAACGCTCAGGCGGAACCGGGCGTTACCGATCTGGTCGAGATGCGTCGGCTGGAACCGCTCGAGCTGGGCTACGCAGAGGACGGTACGGCCAGCGTATCGGAGGTGGACGGTCGGCGAAAGACACGGGCAAGTCAAACGCAAACGTACGACATTCACAAGGGAATTGCCGAAAGTGCCATGGACATATCGCTGCTGACGGCGAACGCGAACCAGCTGCGGCTGCTGATGACGTACAACGAGAAGTCGCACACGTACGTGGCCTGCATTGCGCTTGTTATAAGCTCGCTGGTGTTGCAGATTTTTGTGGCCAGTGGTGTTATCATTATAAAGAGCTATCCACGATCGAAGCCAAATCGTAGAATTCACAAGCTAAAAGTGTGCACCTCCATACTGGTGTCGATCATCACGGTCATAAACATTCTGGTGGCTTCGCTCGTCATCACGGATAAGTAGTTGACCCGCAGTCACTAAGAACATCCCCTTCCAACGCGTGGTTTAGCCGTTATAAACTGCTTATAAAACCAACACACCTGTAGCTGTAAGCGTATTTAGATGGCGTAACGCTTGACNAGCGTTACTCGCTCAATGTGATTCCAATCTCC-AACAGCTAGCTTTAAAGGAGCTGCCTGACTTCCAGTTTTTTGCGGATACAATTATCGTGCTCGGCACGCAAACGTAGCAATCCATTGTATCTATGTACAAAGCCCCAGTTCAGTCTTACACTACCTGCACTACTGCCCCGTGTGATCGATGTTCATTCCACCACCAGAACCGACAGCGTAAAGATGACCAGCAACAGCACCACGATTTACAGAACCAAACCTACCGACGCTGCTGCCAATCAGCATCGTCTTGAAGTGGGCACCCCCATCGAGCACGGATCGTCCCGTTCGGCATCGGAAGAGCTAACGTACGATAGTGCCGGATCCGAGTACTATCTGGGCCTCAGCTACACCGGGTACGACTTCTTCCGATGTGTCGTCGAGATCGCGCTCAGTGTGTCCTTTCTGGCGGCAAACAGTAATCTGCTCCGGCTGCTGGTTAGCTTCAAGGAGACGGAATCGTTCATCGCCACCGAGGTGCTGGTGACGGTTTCGATCGTGCTGCAGATACTGGTGGCGATCTCCGTCATAACGATCACGCAGGTGAACGATCCGAGTCGATACGCAAAGATGAAAGCATTTGCCGTGACGGGTGCGATCATCATTTCGCTCGTCAATCTGCTGATACCGTTCATGATCAATGTGGAGCATTCGCGGATTGATTTCGAGGAGATCTATCGGAGCCTTGGTGAACGTGCAGGACAGCAGTAGTTTTTAAGGCTTTAGAACATTAGTACTGGACATTATTTTAATAAAGCTATAAGCATTATTTTT]

[+] EMBL BX621936             [CTTTTAATCGGACGCGTAGCGAAAAGGTTTGATCGTTTACCCCACAAACTAGACCGTTTGTGCTCGTGATCGTGAGTATGGCAGAACCGTCCCACGGGTCCGCCCAAAACACCAACGACAGCTTGATCGCGATGAACGCTCAGGCGGAACCGGGCGTTACCGATCTGGTCGAGATGCGTCGGCTGGAACCGCTCGAGCTGGGCTACGCAGAGGACGGTACGGCCAGCGTATCGGAGGTGGACGGTCGGCGAAAGACACGGGCAAGTCAAACGCAAACGTACGACATTCACAAGGGAATTGCCGAAAGTGCCATGGACATATCGCTGCTGACGGCGAACGCGAACCAGCTGCGGCTGCTGATGACGTACAACGAGAAGTCGCACACGTACGTGGCCTGCATTGCGCTTGTTATAAGCTCGCTGGTGTTGCAGATTTTTGTGGCCAGTGGTGTTATCATTATAAAGAGCTATCCACGATCGAAGCCAAATCGTAGAATTCACAAGCTAAAAGTGTGCACCTCCATACTGGTGTCGATCATCACGGTCATAAACATTCTGGTGGCTTCGCTCGTCATCACGGATAAGTAGTTGACCCGCAGTCACTAAGAACATCCCCTTCCAACGCGTGGTTTAGCCGTTATAAACTGCTTATAAAACCAACACACCTGTAGCTGTAAGCGTATTTAGATGGCGTAACGCTTGACNAGCGTTACTCGCTCAATGTGATTCCAATCTCC AACAGCTAGCTTTAAAGGAGCTGCCTGACTTCCAGTTTTTTGCGGATACAATTATCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX627825             [                                                                                                                                                                                                                                                                                                                                                 CGCGAACCAGCTGCGGCTGCTGATGACGTACAACGAGAAGTCGCACACGTACGTGGCCTGCATTGCGCTTGTTATAAGCTCGCTGGTGTTGCAGATTTTTGTGGCCAGTGGTGTTATCATTATAAAGAGCTATCCACGATCGAAGCCAAATCGTAGAATTCACAAGCTAAAAGTGTGCACCTCCATACTGGTGTCGATCATCACGGTCATAAACATTCTGGTGGCTTCGCTCGTCATCACGGATAAGTAGTTGACCCGCAGTCACTAAGAACATCCCCTTCCAACGCGTGGTTTAGCCGTTATAAACTGCTTATAAAACCAACACACCTGTAGCTGTAAGCGTATTTAGATGGCGTAACGCTTGACAAGCGTTACTCGCTCAATGTGATTCCAATCTCCAAACAGCTAGCTTTAAAGGAGCTGCCTGACTTCCAGTTTTTTGCGGATACAATTATCGTGCTCGGCACGCAAACGTAGCAATCCATTGTATCTATGTACAAAGCCCCAGTTCAGTCTTACACTACCTGCACTACTGCCCCGTGTGATCGATGTTCATTCCACCACCAGAACCGACAGCGTAAAGATGACCAGCAACAGCACCACGATTTACAGAACCAAACCTACCGACGCTGCTGCCAATCAGCATCGTCTTGAAGTGGGCACCCCCATCGAGCACGGATCGTCCCGTTCGGCATCGGAAGAGCTAACGTACGATAGTGCCGGATCCGAGTACTATCTGGGCCTCAGCTACACCGGGTACGACTTCTTCCGATGTGTCGTCGAGATCGCGCTCAGTGTGT                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX623124             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCTATGTACAAAGCCCCAGTTCAGTCTTACACTACCTGCACTACTGCCCCGTGTGATCGATGTTCATTCCACCACCAGAACCGACAGCGTAAAGATGACCAGCAACAGCACCACGATTTACAGAACCAAACCTACCGACGCTGCTGCCAATCAGCATCGTCTTGAAGTGGGCACCCCCATCGAGCACGGATCGTCCCGTTCGGCATCGGAAGAGCTAACGTACGATAGTGCCGGATCCGAGTACTATCTGGCCCTCAGCTACACCGGGTACGACTTCTTCCGATGTGTCGTCGAGATCGCGCTCAGTGTGTCCTTTCTGGCGGCAAACAGTAATCTGCTCCGGCTGCTGGTTAGCTTCAAGGAGACGGAATCGTTCATCGCCACCGAGGTGCTGGTGACGGTTTCGATCGTGCTGCAGATACTGGTGGCGATCTCCGTCATAACGATCACGCAGGTGAACGATCCGAGTCGATACGCAAAGATGAAAGCATTTGCCGTGACGGGTGCGATCATCATTTCGCTCGTCAATCTGCTGATACCGTTCATGATCAATGTGGAGCATTCGCGGATTGATTTCGAGGAGATCTATCGGAGCCTTGGTGAACGTGCAGGACAGCAGTAGTTTTTAAGGCTTTAGAACATTAGTACTGGACATTATTTTAATAAAGCTATAAGCATTATTTTT]


>consensus_4342#0 CTTTTAATCGGACGCGTAGCGAAAAGGTTTGATCGTTTACCCCACAAACTAGACCGTTTG TGCTCGTGATCGTGAGTATGGCAGAACCGTCCCACGGGTCCGCCCAAAACACCAACGACA GCTTGATCGCGATGAACGCTCAGGCGGAACCGGGCGTTACCGATCTGGTCGAGATGCGTC GGCTGGAACCGCTCGAGCTGGGCTACGCAGAGGACGGTACGGCCAGCGTATCGGAGGTGG ACGGTCGGCGAAAGACACGGGCAAGTCAAACGCAAACGTACGACATTCACAAGGGAATTG CCGAAAGTGCCATGGACATATCGCTGCTGACGGCGAACGCGAACCAGCTGCGGCTGCTGA TGACGTACAACGAGAAGTCGCACACGTACGTGGCCTGCATTGCGCTTGTTATAAGCTCGC TGGTGTTGCAGATTTTTGTGGCCAGTGGTGTTATCATTATAAAGAGCTATCCACGATCGA AGCCAAATCGTAGAATTCACAAGCTAAAAGTGTGCACCTCCATACTGGTGTCGATCATCA CGGTCATAAACATTCTGGTGGCTTCGCTCGTCATCACGGATAAGTAGTTGACCCGCAGTC ACTAAGAACATCCCCTTCCAACGCGTGGTTTAGCCGTTATAAACTGCTTATAAAACCAAC ACACCTGTAGCTGTAAGCGTATTTAGATGGCGTAACGCTTGACNAGCGTTACTCGCTCAA TGTGATTCCAATCTCCAACAGCTAGCTTTAAAGGAGCTGCCTGACTTCCAGTTTTTTGCG GATACAATTATCGTGCTCGGCACGCAAACGTAGCAATCCATTGTATCTATGTACAAAGCC CCAGTTCAGTCTTACACTACCTGCACTACTGCCCCGTGTGATCGATGTTCATTCCACCAC CAGAACCGACAGCGTAAAGATGACCAGCAACAGCACCACGATTTACAGAACCAAACCTAC CGACGCTGCTGCCAATCAGCATCGTCTTGAAGTGGGCACCCCCATCGAGCACGGATCGTC CCGTTCGGCATCGGAAGAGCTAACGTACGATAGTGCCGGATCCGAGTACTATCTGGGCCT CAGCTACACCGGGTACGACTTCTTCCGATGTGTCGTCGAGATCGCGCTCAGTGTGTCCTT TCTGGCGGCAAACAGTAATCTGCTCCGGCTGCTGGTTAGCTTCAAGGAGACGGAATCGTT CATCGCCACCGAGGTGCTGGTGACGGTTTCGATCGTGCTGCAGATACTGGTGGCGATCTC CGTCATAACGATCACGCAGGTGAACGATCCGAGTCGATACGCAAAGATGAAAGCATTTGC CGTGACGGGTGCGATCATCATTTCGCTCGTCAATCTGCTGATACCGTTCATGATCAATGT GGAGCATTCGCGGATTGATTTCGAGGAGATCTATCGGAGCCTTGGTGAACGTGCAGGACA GCAGTAGTTTTTAAGGCTTTAGAACATTAGTACTGGACATTATTTTAATAAAGCTATAAG CATTATTTTT



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)