These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4447#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 803 fasta sequence [ACTGGGTTCGAAAATGTGTGGTGCAATTTCGGCACCATAATGTTGCTTCTGAGAAGAATCTTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCGCCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATGATGATGCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTCAAACGATTGAAGCTGAACGACACCGATCGGTATACGGACGAGTTTCCTTTTCTGTCTATTTGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTTGTGAAAATTGATAGCGAAGATAGGTTGGCTTACGCGCACGGGTACGATAAGATGAGCGTACTGTGGGCAACCCGACCGGATCTGTATGTTTCCCGACACTGGGCGGGTGTACCATCCGGCCCCGGAACGGTACGGGTCGATAGGCCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGCTCTTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCACAATTACGAGCTCGATCAGGACTGGTGGAAGGAGACGTACATCGGCAAGAGGTCGCAGCAAGACTGACTGCTAGCGATGACCAAAGAAAGGGAGCACTGTTTTGTAGAATAATATGAAAATGTGATACAATATTGCCGCACAAATGTTGAGATTAAATGTGTTGACTGTTAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCCCCTC] [+] EMBL CNS08QED [ACTGGGTTCGAAAATGTGTGGTGCAATTTCGGCACCATAATGTTGCTTCTGAGAAGAATCTTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCGCCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATGATGATGCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTCAAACGATTGAAGCTGAACGACACCGATCGGTATACGGACGAGTTTCCTTTTCTGTCTATTTGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTTGTGAAAATTGATAGCGAAGATAGGTTGGCTTACGCGCACGGGTACGATAAGATGAGCGTACTGTGGGCAACCCGACCGGATCTGTATGTTTCCCGACACTGGGCGGGTGTACCATCCGGCCCCGGAACGGTACGGGTCGATAGGCCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGCTCTTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCACAATTACGAGCTCGATCAGGACTGGTGGAAGGAGACGTACATCGGCAAGAGGTCGCAGCAAGACTGACTGCTAGCGATGACCAAAGAAAGGGAGCACTGTTTTGTAGAATAATATGAAAATGTGATACAATATTGCCGCACAAATGTTGAGATTAAATGTGTTGACTGTTAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTCCCCCCCCTC] consensusID : consensus_4447#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 666 fasta sequence [GCACCATAATGTTGCTTCTGAGAAGAATCTTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCGCCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATGCTCTTCCTAGATGATGCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTCAAAAGATTGAAGCTAAACGACACCGACCGGTATAGGGACGAGTTTCCGTTCCTGTCTATTTGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTTGTGAAAATTGATAGCGAAGATAGGTTAGCTTACGCGCACGGGTACGATAAGATGAGCGTACCGTGGCAACCCGACCGGATCTGTATGTTTCCCGACACCGGGCGGGTGTACCATCCGGCCCCGGAACGGTACGGGTCGATAGGGCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGTTCTTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCACAATTACGAGCTCGATCAGGACTGGTGGGAANGAGACGTACATCGGCAAGANGTCGCAGCAAGACTGACTGCTAGCGATGACCAAGGAAAGGGAGTAC] [+] EMBL BX620824 [GCACCATAATGTTGCTTCTGAGAAGAATCTTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCGCCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATGCTCTTCCTAGATGATGCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTCAAAAGATTGAAGCTAAACGACACCGACCGGTATAGGGACGAGTTTCCGTTCCTGTCTATTTGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTTGTGAAAATTGATAGCGAAGATAGGTTAGCTTACGCGCACGGGTACGATAAGATGAGCGTACCGTGGCAACCCGACCGGATCTGTATGTTTCCCGACACCGGGCGGGTGTACCATCCGGCCCCGGAACGGTACGGGTCGATAGGGCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGTTCTTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCACAATTACGAGCTCGATCAGGACTGGTGGGAANGAGACGTACATCGGCAAGANGTCGCAGCAAGACTGACTGCTAG ] [+] EMBL BX628124 [ CCATAATGTTGCTTCTGAGAAGAATCTTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCGCCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATGCTCTTCCTAGATGATGCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTCAAAAGATTGAAGCTAAACGACACCGACCGGTATAGGGACGAGTTTCCGTTCCTGTCTATTTGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTTGTGAAAATTGATAGCGAAGATAGGTTAGCTTACGCGCACGGGTACGATAAGATGAGCGTACCGTGGCAACCCGACCGGATCTGTATGTTTCCCGACACCGGGCGGGTGTACCATCCGGCCCCGGAACGGTACGGGTCGATAGGGCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGTTCTTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCACAATTACGAGCTCGATCAGGACTGGT GGAAGGAGACGTACATCGGCAAGAGGTCGCAGCAAGACTGACTGCTAGCGATGACCAAGGAAAGGGAGTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4447#0 ACTGGGTTCGAAAATGTGTGGTGCAATTTCGGCACCATAATGTTGCTTCTGAGAAGAATC 60 consensus_4447#1 -------------------------------GCACCATAATGTTGCTTCTGAGAAGAATC 29 ***************************** consensus_4447#0 TTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCG 120 consensus_4447#1 TTTTCCCCAACGGCACAAATCTGCCGCCGGGTCGCGTACGTACAGGGCCAATCGCCGGCG 89 ************************************************************ consensus_4447#0 CCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATG----------ATGAT 170 consensus_4447#1 CCGAAAATACGCGAATATTTCTACTACATCGATCACGAAGGGATGCTCTTCCTAGATGAT 149 ********************************************* ***** consensus_4447#0 GCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTC 230 consensus_4447#1 GCGAGAATCAAAAACTTCACCTCCTGCTTCAAGGAGAAGCAATTTCTGGAGTTTTTCTTC 209 ************************************************************ consensus_4447#0 AAACGATTGAAGCTGAACGACACCGATCGGTATACGGACGAGTTTCCTTTTCTGTCTATT 290 consensus_4447#1 AAAAGATTGAAGCTAAACGACACCGACCGGTATAGGGACGAGTTTCCGTTCCTGTCTATT 269 *** ********** *********** ******* ************ ** ********* consensus_4447#0 TGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTT 350 consensus_4447#1 TGTGGCCGGGAACGAAATTTTATCCGCTGTGACGATCTACCGATCGTGTTTACACATGTT 329 ************************************************************ consensus_4447#0 GTGAAAATTGATAGCGAAGATAGGTTGGCTTACGCGCACGGGTACGATAAGATGAGCGTA 410 consensus_4447#1 GTGAAAATTGATAGCGAAGATAGGTTAGCTTACGCGCACGGGTACGATAAGATGAGCGTA 389 ************************** ********************************* consensus_4447#0 CTGTGGGCAACCCGACCGGATCTGTATGTTTCCCGACACTGGGCGGGTGTACCATCCGGC 470 consensus_4447#1 CCGTGG-CAACCCGACCGGATCTGTATGTTTCCCGACACCGGGCGGGTGTACCATCCGGC 448 * **** ******************************** ******************** consensus_4447#0 CCCGGAACGGTACGGGTCGATAGGCCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGCTC 530 consensus_4447#1 CCCGGAACGGTACGGGTCGATAGGGCTGGTCCGGTCGAAGCTTGCGATCGAGCTGAGTTC 508 ************************ ******************************** ** consensus_4447#0 TTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCA 590 consensus_4447#1 TTCGTTTACATTCCAAAATGGTGAAGATCGTCCGCCGACACACTTCCGGTGGAAGGAGCA 568 ************************************************************ consensus_4447#0 CAATTACGAGCTCGATCAGGACTGGTGG-AAGGAGACGTACATCGGCAAGAGGTCGCAGC 649 consensus_4447#1 CAATTACGAGCTCGATCAGGACTGGTGGGAANGAGACGTACATCGGCAAGANGTCGCAGC 628 **************************** ** ******************* ******** consensus_4447#0 AAGACTGACTGCTAGCGATGACCAAAGAAAGGGAGCACTGTTTTGTAGAATAATATGAAA 709 consensus_4447#1 AAGACTGACTGCTAGCGATGACCAAGGAAAGGGAGTAC---------------------- 666 ************************* ********* ** consensus_4447#0 ATGTGATACAATATTGCCGCACAAATGTTGAGATTAAATGTGTTGACTGTTAAAAAAAAA 769 consensus_4447#1 ------------------------------------------------------------ consensus_4447#0 AAAAAAAAAAAAAAGGCCACATGTCCCCCCCCTC 803 consensus_4447#1 ---------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||