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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4464#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 939 fasta sequence
[CTGCATCCTGAGGTGCATCCCATGCCAACTGCCCGGAAGCGTACGCGGACGTAAGCAAAAAGGTGGCCAAGTACACGTTCCTTGCGTTTGTGCTCGCGTCCTTCGTTGGCTGCGGCACGCAGATCTACCAGAAGGCGAGCTACATCCATCTGTTCGTGCTGAGCTACCCGCTGGTACTGTACCTGATGATATTCGGCCTCAATCTGGAGCANTTTCTGCGCACGATCGTCGACACCGAGCCGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGACCGAGATCGACGCACTGCGGACGGACTTTAACGCACGCTGCAAGCAGATCGTCTTTACCTCGCTGCTGAACGCGTACTACGCCGGCTTCGTGCCGTGCGTGCTGGCCTCGAAGCATCTGTACTACAACAACTTCTGGACCACGCAGCATCTGGCGTGCGTGTTTGTCGGCGGGCTGACCATGTGCGTCACGTACTGCTTCCCGATGCGATACTGTGACGTGTTTCACCGGGCCGCGCTACACCTCGGCCAGTGGCAGCGGGTTAGCAATCGGTCGAACAGCGTGCCGACGTACACGTGGTCGAAGACGAACATCTACCCGCACGGGACGTACGTGCGGCACATGGGCGAGGTGTACCGGTCGGTGGGCTACTGCACATCGGCCGTACCGGCCAACACTAGCCATTATAGATTTTACGCCATTTTCAGCAACCATATCGTGATCTATCTGACACTGTTCGCTGTGCAGATGCTGCTGATAGTGCTGCAGCTGGCCATATTTGCGCTCACCCCGGAGTGGCAAAACGTGCTCTCGGTGGCGTTTCTGTTGCTGATCAACTTTTTCACCCTGNTTCGGATCGCCCGGGACTACTTTATCGCCCGCCGGATATACGCCAACGAGCCGCTGTACCTCGGCATGC]
[+] EMBL BX628852 [CTGCATCCTGAGGTGCATCCCATGCCAACTGCCCGGAAGCGTACGCGGACGTAAGCAAAAAGGTGGCCAAGTACACGTTCCTTGCGTTTGTGCTCGCGTCCTTCGTTGGCTGCGGCACGCAGATCTACCAGAAGGCGAGCTACATCCATCTGTTCGTGCTGAGCTACCCGCTGGTACTGTACCTGATGATATTCGGCCTCAATCTGGAGCANTTTCTGCGCACGATCGTCGACACCGAGCCGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGAC ]
[+] EMBL BX621838 [ CATCTGTTCGTGCTGAGCTACCCGCTGGTACTGTACCTGATGATATTCGGCCTCAATCTGGAGCAGTTTCTGCGCACGATCGTCGACACCGAGCCGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGACCGAGATCGACGCACTGCGGACGGACTTTAACGCACGCTGCAAGCAGATCGTCTTTACCTCGCTGCTGAACGCGTACTACGCCGGCTTCGTGCCGTGCGTGCTGGCCTCGAAGCATCTGTACTACAACAACTTCTGGACCACGCAGCATCTGGCGTGCGTGTTTGTCGGCGGGCTGACCATGTGCGTCACGTACTGCTTCCCGATGCGATACTGTGACGTGTTTCACCGGGCCGCGCTACACCTCGGCCAGTGGCAGCGGGTTAGCAATCGGTCGAACAGCGTGCCGACGTACACGTGGTCGAAGACGAACATCTACCCGCACGGGACGTACGTGCGGCACATGGGCGAGGTGTACCGGTCGGTGGGCTACTGCACATCGGCCGTACCGGCCAACACTAGCCATTATAGATTTTACGCCATTTTCAGCAACCATATCGTGATCTATCTGACACTGTTCGCTGTGCAGATGCTGCTGATAGTGCTGCAGCTGGCCATATTTGCGCTCACCCCGGAGTGGCAAAACGTGCTCTCGGTGGCGTTTCTGTTGCTGATCAACTTTTTCACCCTGNTTCGGATCGCCCGGGACTACTTTATCGCCCGCCGGATATACGCCAACGAGCCGCTGTACCTCGGCATGC]
consensusID : consensus_4464#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 668 fasta sequence
[CCGCGGACGCGTGGGTGCGGCACACAGATCTACCAGAAGGCGAGCTACATCCATCTGTTCGTGCTGAGCTACCCGCTGGTACTGTACCTGATGATATTCGGCCTCAATCTGGAGCAGTTTCTGCGCACGATCGTCGACACCGAGCCGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGACCGAGATCGACGCACTGCGGACGGACTTTAACGCACGCTGCAAGCAGATCGTCTTTACCTCGCTGCTGAACGCGTACTACGCCGGCTTCGTGCCGTGCGTGCTGGCCTCGAAGCATCTGTACTACAACAACTTCTGGACCACGCAGCATCTGGCGTGCGTGTTTATCGGCGGGCTGACCATGTGCGTCACGTACTGCTTCCCGATGCGGTACTGTGACGTGTTTCACCGGGCCGCACTGCACCTCGGCCAGTGGCAGCGGGTTAGCAATCGGTCGAACAGCGTGCCGACGTACACGTGGTCGAAGACGAACATCTACCCGCACGGGACGTACGTGCGGCACATGGGCGAGGTGTACCGGTCGGTGGGCTACTGCACATCGGCCGTACCGGCCAACACTAGCCATTATAGATTTTACGCCATTTTCAGCAACCATATCGTGATCTATCTGACACTGTTCGCTGT]
[+] EMBL BM644226 [CCGCGGACGCGTGGGTGCGGCACACAGATCTACCAGAAGGCGAGCTACATCCATCTGTTCGTGCTGAGCTACCCGCTGGTACTGTACCTGATGATATTCGGCCTCAATCTGGAGCAGTTTCTGCGCACGATCGTCGACACCGAGCCGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGACCGAGATCGACGCACTGCGGACGGACTTTAACGCACGCTGCAAGCAGATCGTCTTTACCTCGCTGCTGAACGCGTACTACGCCGGCTTCGTGCCGTGCGTGCTGGCCTCGAAGCATCTGTACTACAACAACTTCTGGACCACGCAGCATCTGGCGTGCGTGTTTATCGGCGGGCTGACCATGTGCGTCACGTACTGCTTCCCGATGCGGTACTGTGACGTGTTTCACCGGGCCGCACTGCACCTCGGCCAGTGGCAGCGGGTTAGCAATCGGTCGAACAGCGTGCCGACGTACACGTGGTCGAAGACGAACATCTACCCGCACGGGACGTACGTGCGGCACATGGGCGAGGTGTACCGGTCGGTGGGCTACTGCACATCGGCCGTACCGGCCAACACTAGCCATTATAGATTTTACGCCATTTTCAGCAACCATATCGTGATCTATCTGACACTGTTCGCTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4464#0 CTGCATCCTGAGGTGCATCCCATGCCAACTGCCCGGAAGCGTACGCGGACGTAAGCAAAA 60
consensus_4464#1 ------------------------------------------------------------
consensus_4464#0 AGGTGGCCAAGTACACGTTCCTTGCGTTTGTGCTCGCGTCCTTCGTTGGCTGCGGCACGC 120
consensus_4464#1 ---------------------------------CCGCGGACGC--GTGGGTGCGGCACAC 25
**** * *** ******** *
consensus_4464#0 AGATCTACCAGAAGGCGAGCTACATCCATCTGTTCGTGCTGAGCTACCCGCTGGTACTGT 180
consensus_4464#1 AGATCTACCAGAAGGCGAGCTACATCCATCTGTTCGTGCTGAGCTACCCGCTGGTACTGT 85
************************************************************
consensus_4464#0 ACCTGATGATATTCGGCCTCAATCTGGAGCANTTTCTGCGCACGATCGTCGACACCGAGC 240
consensus_4464#1 ACCTGATGATATTCGGCCTCAATCTGGAGCAGTTTCTGCGCACGATCGTCGACACCGAGC 145
******************************* ****************************
consensus_4464#0 CGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGA 300
consensus_4464#1 CGAACTGCATCAACGGGATGCCGCTGCACAGCTGCTCCTCCAGTGCGGGCGCCATCCGGA 205
************************************************************
consensus_4464#0 CCGAGATCGACGCACTGCGGACGGACTTTAACGCACGCTGCAAGCAGATCGTCTTTACCT 360
consensus_4464#1 CCGAGATCGACGCACTGCGGACGGACTTTAACGCACGCTGCAAGCAGATCGTCTTTACCT 265
************************************************************
consensus_4464#0 CGCTGCTGAACGCGTACTACGCCGGCTTCGTGCCGTGCGTGCTGGCCTCGAAGCATCTGT 420
consensus_4464#1 CGCTGCTGAACGCGTACTACGCCGGCTTCGTGCCGTGCGTGCTGGCCTCGAAGCATCTGT 325
************************************************************
consensus_4464#0 ACTACAACAACTTCTGGACCACGCAGCATCTGGCGTGCGTGTTTGTCGGCGGGCTGACCA 480
consensus_4464#1 ACTACAACAACTTCTGGACCACGCAGCATCTGGCGTGCGTGTTTATCGGCGGGCTGACCA 385
******************************************** ***************
consensus_4464#0 TGTGCGTCACGTACTGCTTCCCGATGCGATACTGTGACGTGTTTCACCGGGCCGCGCTAC 540
consensus_4464#1 TGTGCGTCACGTACTGCTTCCCGATGCGGTACTGTGACGTGTTTCACCGGGCCGCACTGC 445
**************************** ************************** ** *
consensus_4464#0 ACCTCGGCCAGTGGCAGCGGGTTAGCAATCGGTCGAACAGCGTGCCGACGTACACGTGGT 600
consensus_4464#1 ACCTCGGCCAGTGGCAGCGGGTTAGCAATCGGTCGAACAGCGTGCCGACGTACACGTGGT 505
************************************************************
consensus_4464#0 CGAAGACGAACATCTACCCGCACGGGACGTACGTGCGGCACATGGGCGAGGTGTACCGGT 660
consensus_4464#1 CGAAGACGAACATCTACCCGCACGGGACGTACGTGCGGCACATGGGCGAGGTGTACCGGT 565
************************************************************
consensus_4464#0 CGGTGGGCTACTGCACATCGGCCGTACCGGCCAACACTAGCCATTATAGATTTTACGCCA 720
consensus_4464#1 CGGTGGGCTACTGCACATCGGCCGTACCGGCCAACACTAGCCATTATAGATTTTACGCCA 625
************************************************************
consensus_4464#0 TTTTCAGCAACCATATCGTGATCTATCTGACACTGTTCGCTGTGCAGATGCTGCTGATAG 780
consensus_4464#1 TTTTCAGCAACCATATCGTGATCTATCTGACACTGTTCGCTGT----------------- 668
*******************************************
consensus_4464#0 TGCTGCAGCTGGCCATATTTGCGCTCACCCCGGAGTGGCAAAACGTGCTCTCGGTGGCGT 840
consensus_4464#1 ------------------------------------------------------------
consensus_4464#0 TTCTGTTGCTGATCAACTTTTTCACCCTGNTTCGGATCGCCCGGGACTACTTTATCGCCC 900
consensus_4464#1 ------------------------------------------------------------
consensus_4464#0 GCCGGATATACGCCAACGAGCCGCTGTACCTCGGCATGC 939
consensus_4464#1 ---------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||