Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 4553 cluster # 4553       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4553#0 length = 997 sequences # 3  
consensusID : consensus_4553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 997
fasta sequence 
                              [CCGCCCACGCGTCCGACGGTACCAAAAAAACATATGGCAAAAAGGTCCGGGTTCATCCAAAAACTCCACACGTACGCCACCACACACAAGCCGTGTTGAGTTATCAACCGGGCAGGCCAGTGTGTTGGGTTGAGCCAGCCGCCCCGATTAGCCGTAACCTTACGAGTCGAAGTTTTCAACGACGTAAACCCCATCAGCGGTGCACTTCTCACAGAATGAACTGGTGATTTTGCGACAATAACGCGCCTCGTAAAATATCAACGAAAATCTCCACCAAAATGGGAACCGATACAACCATTGCGATCGAGCGCACTAAAACGCCTTCGACTCCTCCAACGACACTCGAGTTCCAGGACATCTGCTACCAGGAGCGCCATAAAGATGGACAGAACAAGCAACTGCTGAATAGTGTGTCCGGTGCGTTCCATTCTGGAAGGCTTGCAGGTATACTCGGTCCTTCTGGGGCCGGGAAGTCTACTCTTCTT-AAC-ATTTTGAGTGGATTCAAAACAAACAATGTGTCCGGCAACATACTCATCAACGGTACACCGATCGATCGCCGGAAATATCGTCGCGAGGTTTCGTACACGCCGCAGACATATGCCTGCTCGGTAACATAACCGTCACGGAAAGTTTGGAGTTTGCAGCCGACCTGAAACTCTCACCCACCACCACAATTGCCCAAAAATCGGCGATGGTTGTGGACGTCCTGAAGCTGCTCGGTCTCTCCAAATGTGCCCACAACCCGGTAGCAAACATATCCGGCGGTGAAAAGAAGCGTCTCTCGATCGGGTTAGAACTGATCTCCAACCCATCGATCATGTTCTTCGACGAGCCAACGAGCGGGCTGGACATTATAGCGGCGATGCAGGTCGTCGCCCATCTTAAAGATCTGGCCGCCAGTGGACGCTGTGTCATCTGCGTCATCCACCAGCCCAGCTCGAGCATTCTGCAGATGTTTGACGATCTGTTCGTCCTGTCCGAGGGACACTGTCTCTAC]

[+] EMBL BM589912             [CCGCCCACGCGTCCGACGGTACCAAAAAAACATATGGCAAAAAGGTCCGGGTTCATCCAAAAACTCCACACGTACGCCACCACACACAAGCCGTGTTGAGTTATCAACCGGGCAGGCCAGTGTGTTGGGTTGAGCCAGCCGCCCCGATTAGCCGTAACCTTACGAGTCGAAGTTTTCAACGACGTAAACCCCATCAGCGGTGCACTTCTCACAGAATGAACTGGTGATTTTGCGACAATAACGCGCCTCGTAAAATATCAACGAAAATCTCCACCAAAATGGGAACCGATACAACCATTGCGATCGAGCGCACTAAAACGCCTTCGACTCCTCCAACGACACTCGAGTTCCAGGACATCTGCTACCAGGAGCGCCATAAAGATGGACAGAACAAGCAACTGCTGAATAGTGTGTCCGGTGCGTTCCATTCTGGAAGGCTTGCCGGTATACTCGGTCCTTCTGGGGCCGGGAAATCTACTCTTCTT AAC ATTTTGAGTGGATTCGAAACGAACAATGTATCCGGCAACATAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS08W93             [                                                                                                                                                                                       GTAAACCCCAGCAGTGGTGCACTTCTGACAGTATGAACTGGTGATTTTGCGACAACAACGCGCCTCGTAGAATAGCAACGAAAATCTCCACCAAAATGGGAACCGATACAACCATTGCGATCGAGCGCACTAAAACGCCTTCGACTCCTCCAACGACACTCGAGTTCCGGGACATCTGCTACCAGGTGCGCCATAAGGATGGACAGAACAAGCAACTGCTGAATAGTGTGTCCGGCGCGTTCCATTCTGGAAGGCTTGCAGGTATACTCGGTCCTTCTGGGGCCGGAAAGTCTACTCTTCTTAAACGGTTTTGAGTGGATTCAAAACAAACAATGTGTCCGGCAACATACTCATCAACGGTACACCGATCGATCGCCGGAAATATCGTCGCGAGGTTTCGTACACGCCGCAGACATATGCCTGCTCGGTAACATAACCGTCACGGAAAGTTTGGAGTTTGCAGCCGACCTGAAACTCTCACCCACCACCACAATTGCCCAAAAATCGGCGATGGTTGTGGACGTCCTGAAGCTGCTCGGTCTCTCCAAATGTGCCCACAACCCGGTAGCAAACATATCCGGCGGTGAAAAGAAGCGTCTCTCGATCGGGTTAGAACTGATCTCCAACCCATCGATCATGTTCTTCGACGAGCCAACGAGCGGGCTGGACATTATAGCGGCGATGCAGGTCGTCGCCCATCTTAAAGATCTGGCCGCCAGTGGACGCTGTGTCATCTGCGTCATCCACCAGCCCAGCTCGAGCATTCTGCAGATGTTTGACGATCTGTTCGTCCTGTCCGAGGGACACTGTCTCTAC]
[+] EMBL CNS08ZIC             [                                                                                                                                                                                                                                                                                                                                                                                                                                        CCATTCTGGAAGGCTTGCAGGTATACTCGGTCCTTCTGGGGCCGCCCAGTCTACTCTTCTT AAC ATTTTGAGTGGATTCAAAACAAACAATGTGTCCGGCAACATACTCATCAACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]




>consensus_4553#0
CCGCCCACGCGTCCGACGGTACCAAAAAAACATATGGCAAAAAGGTCCGGGTTCATCCAA
AAACTCCACACGTACGCCACCACACACAAGCCGTGTTGAGTTATCAACCGGGCAGGCCAG
TGTGTTGGGTTGAGCCAGCCGCCCCGATTAGCCGTAACCTTACGAGTCGAAGTTTTCAAC
GACGTAAACCCCATCAGCGGTGCACTTCTCACAGAATGAACTGGTGATTTTGCGACAATA
ACGCGCCTCGTAAAATATCAACGAAAATCTCCACCAAAATGGGAACCGATACAACCATTG
CGATCGAGCGCACTAAAACGCCTTCGACTCCTCCAACGACACTCGAGTTCCAGGACATCT
GCTACCAGGAGCGCCATAAAGATGGACAGAACAAGCAACTGCTGAATAGTGTGTCCGGTG
CGTTCCATTCTGGAAGGCTTGCAGGTATACTCGGTCCTTCTGGGGCCGGGAAGTCTACTC
TTCTTAACATTTTGAGTGGATTCAAAACAAACAATGTGTCCGGCAACATACTCATCAACG
GTACACCGATCGATCGCCGGAAATATCGTCGCGAGGTTTCGTACACGCCGCAGACATATG
CCTGCTCGGTAACATAACCGTCACGGAAAGTTTGGAGTTTGCAGCCGACCTGAAACTCTC
ACCCACCACCACAATTGCCCAAAAATCGGCGATGGTTGTGGACGTCCTGAAGCTGCTCGG
TCTCTCCAAATGTGCCCACAACCCGGTAGCAAACATATCCGGCGGTGAAAAGAAGCGTCT
CTCGATCGGGTTAGAACTGATCTCCAACCCATCGATCATGTTCTTCGACGAGCCAACGAG
CGGGCTGGACATTATAGCGGCGATGCAGGTCGTCGCCCATCTTAAAGATCTGGCCGCCAG
TGGACGCTGTGTCATCTGCGTCATCCACCAGCCCAGCTCGAGCATTCTGCAGATGTTTGA
CGATCTGTTCGTCCTGTCCGAGGGACACTGTCTCTAC

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)