These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4565#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 285 fasta sequence [AGCCGCCGAAATCACCCTTCACCATCACCTCACCGCCCGCCACCCATGTAGGGCCACATTTCGAGCTACCATCGTCGCGCACGTCCTCGCAGCTGAGCCACTCGGACGGCACGCACCTGACGCACTCGCGCAACCACTCGCAGGACAGTGCCACCTCGTACCGGTCGACCGATGGGTCGCGGACGTCGTACGAGACCGCCTCCTATCCGTACGATGCGTACGACAGCATTGTGCTGCCGCGGCGTGCCAGCCACTCGCAGGAGCCGACGTTCCAGTTTTTGCGCA] [+] EMBL BX613970 [AGCCGCCGAAATCACCCTTCACCATCACCTCACCGCCCGCCACCCATGTAGGGCCACATTTCGAGCTACCATCGTCGCGCACGTCCTCGCAGCTGAGCCACTCGGACGGCACGCACCTGACGCACTCGCGCAACCACTCGCAGGACAGTGCCACCTCGTACCGGTCGACCGATGGGTCGCGGACGTCGTACGAGACCGCCTCCTATCCGTACGATGCGTACGACAGCATTGTGCTGCCGCGGCGTGCCAGCCACTCGCAGGAGCCGACGT ] [+] EMBL BX613969 [ ACCATCGTCGCGCACGTCCTCGCAGCTGAGCCACTCGGACGGCACGCACCTGACGCACTCGCGCAACCACTCGCAGGACAGTGCCACCTCGTACCGGTCGACCGATGGGTCGCGGACGTCGTACGAGACCGCCTCCTATCCGTACGATGCGTACGACAGCATTGTGCTGCCGCGGCGTGCCAGCCACTCGCAGGAGCCGACGTTCCAGTTTTTGCGCA] consensusID : consensus_4565#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 127 fasta sequence [ATCGTCGCGCACGTCCTCGCAGCAGAGCCACTCGGACGGCACGCACCTGACGCACACGCGCAACCACACGCAGGACAGTGCCACCTCGGACCGGGCGACCGAAGGGGCGCGGACGACGAACGAGACC] [+] EMBL BX613971 [ATCGTCGCGCACGTCCTCGCAGCAGAGCCACTCGGACGGCACGCACCTGACGCACACGCGCAACCACACGCAGGACAGTGCCACCTCGGACCGGGCGACCGAAGGGGCGCGGACGACGAACGAGACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4565#0 AGCCGCCGAAATCACCCTTCACCATCACCTCACCGCCCGCCACCCATGTAGGGCCACATT 60 consensus_4565#1 ------------------------------------------------------------ consensus_4565#0 TCGAGCTACCATCGTCGCGCACGTCCTCGCAGCTGAGCCACTCGGACGGCACGCACCTGA 120 consensus_4565#1 ----------ATCGTCGCGCACGTCCTCGCAGCAGAGCCACTCGGACGGCACGCACCTGA 50 *********************** ************************** consensus_4565#0 CGCACTCGCGCAACCACTCGCAGGACAGTGCCACCTCGTACCGGTCGACCGATGGGTCGC 180 consensus_4565#1 CGCACACGCGCAACCACACGCAGGACAGTGCCACCTCGGACCGGGCGACCGAAGGGGCGC 110 ***** *********** ******************** ***** ******* *** *** consensus_4565#0 GGACGTCGTACGAGACCGCCTCCTATCCGTACGATGCGTACGACAGCATTGTGCTGCCGC 240 consensus_4565#1 GGACGACGAACGAGACC------------------------------------------- 127 ***** ** ******** consensus_4565#0 GGCGTGCCAGCCACTCGCAGGAGCCGACGTTCCAGTTTTTGCGCA 285 consensus_4565#1 --------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||