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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4572#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1039 fasta sequence
[GAGGCAGATCCCGCACGAGGTCCAGCGCCACCAGTACGCCGGAAAAGAAACCGAAAAAACGAGACACCAGCACCGAGCGCGGTACTGTTAAGGTTATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCGACGCCTCTGCTGCCGATGAGTGGACATTCGGATACGGCAAACCCACCGACAGAAGAACAGGAGACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGATGCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCGGTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGATGCAACCGGTACTGTTGCAGTCGGTGAAATCGTCACGGAACTACACAAACCTCAAGAAGAACTTGCGACAGGCTGTCTCTAAGGAAAGCGAATAGGCAAGCAGAGCGTCTTGCTTCGGCAAAACCAATTATAAAACAAACCGAAGGCGTACTGTTTCGTTCGAGAAACTGCAAAAGGTATAACGTGTATCAGTGCATAAAGTATATTGGTGCTAATCGCCGTTAAAACCATAACCTCCATCACTTGTTTGGACGGACAAGGGATTGGCGGTGTTAAAAACGAAAAGAAAGGTGAAGCCCCGAAGTCACAGTANAANTTTTACCTTTTTAAAATAAGGCACAAACTTATCTCTNAGGCCCATTTTCCCGGNTNGACNGAAGCCTTTTTCTCNGGCGCCAAATTGTTTGGCTTCCCAAGGAAATTGTTTTNGGAACAATTCCTTAAACCCACCGAANTGTTGCAAACAGCAACCTTTTAGCCCGAATTNCCCACAAAAATTTAGACAGACAAAAACCGCATTAACCGCAGGAATGAAACACGCAATTCGCTCCAACTTGGCACCCGTTTAAAACCTGATTCGTAAAATTACACGGTGAAAATCGCTNTTGCACTNGCGACATTTACACAACACCACGGATAACTGTG]
[+] EMBL BX467636 [GAGGCAGATCCCGCACGAGGTCCAGCGCCACCAGTACGCCGGAAAAGAAACCGAAAAAACGAGACACCAGCACCGAGCGCGGTACTGTTAAGGTTATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCGACGCCTCTGCTGCCGATGAGTGGACATTCGGATACGGCAAACCCACCGACAGAAGAACAGGAGACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGATGCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCGGTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGATGCAACCGGTACTGTTGCAGTCGGTGAAATCGTCACGGAACTACACAAACCTCAAGAAGAACTTGCGACAGGCTGTCTCTAAGGAAAGCGAATAGGCAAGCAGAGCGTCTTGCTTCGGCAAAACCAATTATAAAACAAACCGAAGGCGTACTGTTTCGTTCGAGAAACTGCAAAAGGTATAACGTGTATCAGTGCATAAAGTATATTGGTGCTAATCGCCGTTAAAACCATAACCTCCATCACTTGTTTGGACGGACAAGGGATTGGCGGTGTTAAAAACGAAAAGAAAGGTGAAGCCCCGAAGTCACAGTANAANTTTTACCTTTTTAAAATAAGGCACAAACTTATCTCTNAGGCCCATTTTCCCGGNTNGACNGAAGCCTTTTTCTCNGGCGCCAAATTGTTTGGCTTCCCAAGGAAATTGTTTTNGGAACAATTCCTTAAACCCACCGAANTGTTGCAAACAGCAACCTTTTAGCCCGAATTNCCCACAAAAATTTAGACAGACAAAAACCGCATTAACCGCAGGAATGAAACACGCAATTCGCTCCAACTTGGCACCCGTTTAAAACCTGATTCGTAAAATTACACGGTGAAAATCGCTNTTGCACTNGCGACATTTACACAACACCACGGATAACTGTG]
consensusID : consensus_4572#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1019 fasta sequence
[GAGGCAGATCGGCACGAGGTCAGCGCCACCAGTACGCCGGAAAAGAAACGAAAAAACGAGACACCAGCACCGAGCGCGGTACTGTTAAGGTTATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCGACGCCTCTGCTGCCGATGAGTGGACATTCGGATACGGCAAACCCACCGACAGAAGAACAGGAGACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGATGCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCGGTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGATGCAACCGGTACTGTTGCAGTCGGTGAAATCGTCACGGAACTACACAAACCTCAAGAAGAACTTGCGACAGCTGTCTCTAAGGAAAGCGAATAGGCAAGCAGAGCGTCTTGCTTCGGCAAAACCAATTATANAAACAAACCGAAGGCGTACTGTTTCGTTCGAGAAACTGCAAAAGTATAACGTGTATAATGCATAAGTATATTNTTCTATCGCCGTAAAACCATAACTCCATCACTGTTTGACGGACAGGGATTGCGTGTAAACGAAGGAAGTGAGGCCCGAGATCACTCAATTTACCTTTGAACATAGGCACAACCTTTTNTAGCCATTTNCGNTGAGACGCTTTTACGCCGCCAAATGTTGCTCAAGAAATGTTCTGAATTCTAACACGATCTGACAAGANNTTAACCGGGNTGCCCANACAATGTTAAACAGGGAGAAAACCGGATTAAACCGAGGGACTNGAAAANGNGTGTGTCTCAACTTGCGANCGGTAAAACGCNGGCNGCGNGACACATTAGACNGGGATGAAATGTTGTTTGCATCTGGAACATTGACAGANACANGGTACTGGNACGNCCCACTNGGNAGGGGTTNGCTAGAAAACACCNGGCGGTTNGAAAAGGG]
[+] EMBL BX467777 [GAGGCAGATCGGCACGAGGTCAGCGCCACCAGTACGCCGGAAAAGAAACGAAAAAACGAGACACCAGCACCGAGCGCGGTACTGTTAAGGTTATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCGACGCCTCTGCTGCCGATGAGTGGACATTCGGATACGGCAAACCCACCGACAGAAGAACAGGAGACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGATGCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCGGTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGATGCAACCGGTACTGTTGCAGTCGGTGAAATCGTCACGGAACTACACAAACCTCAAGAAGAACTTGCGACAGCTGTCTCTAAGGAAAGCGAATAGGCAAGCAGAGCGTCTTGCTTCGGCAAAACCAATTATANAAACAAACCGAAGGCGTACTGTTTCGTTCGAGAAACTGCAAAAGTATAACGTGTATAATGCATAAGTATATTNTTCTATCGCCGTAAAACCATAACTCCATCACTGTTTGACGGACAGGGATTGCGTGTAAACGAAGGAAGTGAGGCCCGAGATCACTCAATTTACCTTTGAACATAGGCACAACCTTTTNTAGCCATTTNCGNTGAGACGCTTTTACGCCGCCAAATGTTGCTCAAGAAATGTTCTGAATTCTAACACGATCTGACAAGANNTTAACCGGGNTGCCCANACAATGTTAAACAGGGAGAAAACCGGATTAAACCGAGGGACTNGAAAANGNGTGTGTCTCAACTTGCGANCGGTAAAACGCNGGCNGCGNGACACATTAGACNGGGATGAAATGTTGTTTGCATCTGGAACATTGACAGANACANGGTACTGGNACGNCCCACTNGGNAGGGGTTNGCTAGAAAACACCNGGCGGTTNGAAAAGGG]
consensusID : consensus_4572#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence
[CCGGACGAACAGTTGCTGAAGATAGATAACATTAAGAAACAAGCGATGAACAACGCAAGCAAGGAAACAAACGTAAACGGGGATGAGCCCGCAACTGAAGAAAAAGAAACAACCTCGGAAGTGAATGCTACTGAAGATAAGGTATCGAATGGGCATGCGATCAAGCCAGCGGAAAATGCTGCCGAAACTACATCCGCAGTACAGGACACGTCGGGTGGCGAAACATCCAGCGCCACCAGTACACCGGAAAAGAAACCGAAAAAACGAGACACCAGTACCGAGCGCGGCACTGTTAAGGTTATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCAACGCCACTGCTGCCGATGAGTGGACATTCGGATACGGCAAACGCACCGACAGAAGAACAGGAGACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGATGCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCGGTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGATGCAACCGGTACTGTTGCAGTCGGTGAAATTGTGACGGAACTACACAAACCTCAAGAAGATCTTGCGACAGCTGTCTCTA]
[+] EMBL BM576385 [CCGGACGAACAGTTGCTGAAGATAGATAACATTAAGAAACAAGCGATGAACAACGCAAGCAAGGAAACAAACGTAAACGGGGATGAGCCCGCAACTGAAGAAAAAGAAACAACCTCGGAAGTGAATGCTACTGAAGATAAGGTATCGAATGGGCATGCGATCAAGCCAGCGGAAAATGCTGCCGAAACTACATCCGCAGTACAGGACACGTCGGGTGGCGAAACATCCAGCGCCACCAGTACACCGGAAAAGAAACCGAAAAAACGAGACACCAGTACCGAGCGCGGCACTGTTAAGGTTATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCAACGCCACTGCTGCCGATGAGTGGACATTCGGATACGGCAAACGCACCGACAGAAGAACAGGAGACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGATGCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCGGTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGATGCAACCGGTACTGTTGCAGTCGGTGAAATTGTGACGGAACTACACAAACCTCAAGAAGATCTTGCGACAGCTGTCTCTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4572#0 ------------------------------------------------------------
consensus_4572#1 ------------------------------------------------------------
consensus_4572#2 CCGGACGAACAGTTGCTGAAGATAGATAACATTAAGAAACAAGCGATGAACAACGCAAGC 60
consensus_4572#0 ------------------------------------------------------------
consensus_4572#1 ------------------------------------------------------------
consensus_4572#2 AAGGAAACAAACGTAAACGGGGATGAGCCCGCAACTGAAGAAAAAGAAACAACCTCGGAA 120
consensus_4572#0 ------------------------------------------------------------
consensus_4572#1 ------------------------------------------------------------
consensus_4572#2 GTGAATGCTACTGAAGATAAGGTATCGAATGGGCATGCGATCAAGCCAGCGGAAAATGCT 180
consensus_4572#0 ----------------------GAGGCAGATCCC---GCACGAGGTCCAGCGCCACCAGT 35
consensus_4572#1 ----------------------GAGGCAGATCG----GCACGAGGTC-AGCGCCACCAGT 33
consensus_4572#2 GCCGAAACTACATCCGCAGTACAGGACACGTCGGGTGGCGAAACATCCAGCGCCACCAGT 240
* ** ** ** * ** ************
consensus_4572#0 ACGCCGGAAAAGAAACCGAAAAAACGAGACACCAGCACCGAGCGCGGTACTGTTAAGGTT 95
consensus_4572#1 ACGCCGGAAAAGAAAC-GAAAAAACGAGACACCAGCACCGAGCGCGGTACTGTTAAGGTT 92
consensus_4572#2 ACACCGGAAAAGAAACCGAAAAAACGAGACACCAGTACCGAGCGCGGCACTGTTAAGGTT 300
** ************* ****************** *********** ************
consensus_4572#0 ATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCGACG 155
consensus_4572#1 ATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCGACG 152
consensus_4572#2 ATGGCGATGGAGGTGACGGCACAGCGCGAAAATGGCAAGCGTCTTAGCCGACCATCAACG 360
******************************************************** ***
consensus_4572#0 CCTCTGCTGCCGATGAGTGGACATTCGGATACGGCAAACCCACCGACAGAAGAACAGGAG 215
consensus_4572#1 CCTCTGCTGCCGATGAGTGGACATTCGGATACGGCAAACCCACCGACAGAAGAACAGGAG 212
consensus_4572#2 CCACTGCTGCCGATGAGTGGACATTCGGATACGGCAAACGCACCGACAGAAGAACAGGAG 420
** ************************************ ********************
consensus_4572#0 ACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGAT 275
consensus_4572#1 ACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGAT 272
consensus_4572#2 ACAAGATCGATCGTTCTCGATGGCCGGTTACCGCACGATTCAAAGATTTTGGTGTCGGAT 480
************************************************************
consensus_4572#0 GCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCG 335
consensus_4572#1 GCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCG 332
consensus_4572#2 GCTGAAACAGCGGTGGAAAAAATGGAACCGGAAAACTCCGAGGAAGAGGACGATGCACCG 540
************************************************************
consensus_4572#0 GTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGAT 395
consensus_4572#1 GTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGAT 392
consensus_4572#2 GTGATATTGAGTGGCAAAATGACGCTGTCGTTGATCAACATGGATTTCATCGAAAAGGAT 600
************************************************************
consensus_4572#0 GCAACCGGTACTGTTGCAGTCGGTGAAATCGTCACGGAACTACACAAACCTCAAGAAGAA 455
consensus_4572#1 GCAACCGGTACTGTTGCAGTCGGTGAAATCGTCACGGAACTACACAAACCTCAAGAAGAA 452
consensus_4572#2 GCAACCGGTACTGTTGCAGTCGGTGAAATTGTGACGGAACTACACAAACCTCAAGAAGAT 660
***************************** ** **************************
consensus_4572#0 CTTGCGACAGGCTGTCTCTAAGGAAAGCGAATAGGCAAGCAGAGCGTCTTGCTTCGGCAA 515
consensus_4572#1 CTTGCGACAG-CTGTCTCTAAGGAAAGCGAATAGGCAAGCAGAGCGTCTTGCTTCGGCAA 511
consensus_4572#2 CTTGCGACAG-CTGTCTCTA---------------------------------------- 679
********** *********
consensus_4572#0 AACCAATTATAAAA-CAAACCGAAGGCGTACTGTTTCGTTCGAGAAACTGCAAAAGGTAT 574
consensus_4572#1 AACCAATTATANAAACAAACCGAAGGCGTACTGTTTCGTTCGAGAAACTGCAAAAG-TAT 570
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 AACGTGTATCAGTGCATAAAGTATATTGGTGCTAATCGCCGTTAAAACCATAACCTCCAT 634
consensus_4572#1 AACGTGTAT-AATGCATAA-GTATATTNTTCT--ATCGCCGT-AAAACCATAAC-TCCAT 624
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 CACTTGTTTGGACGGACAAGGGATTGGCGGTGTTAAAAACGAAAAGAAAGGTGAAGCCCC 694
consensus_4572#1 CACT-GTTTG-ACGGACA-GGGATTGC--GTGT---AAACGAAGGAA---GTGAGGCCC- 672
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 GAAGTCACAGTANAANTTTTACCTTTTTAAAATAAGGCACAAACTTATCTCTNAGGCCCA 754
consensus_4572#1 GAGATCAC----TCAATTTA--CCTTTGAACATA-GGCACAACCTT---TTNTAGCCATT 722
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 TTTTCCCGGNTNGACNGAAGCCTTTTTCTCNGGCGCCA-AATTGTTTGGCTTCCCAAGGA 813
consensus_4572#1 TNCGNTGAGACGCTTTTACGCCGCCAAATGTTGCTCAAGAAATGTTCTGAATTCTAACAC 782
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 AATTGTTTTNGGAACAATTCCTTAAACCCAC-CGAANTGTTGCAAACAGCAACCTT--TT 870
consensus_4572#1 GATCTGACAAGANNTTAACCGGGNTGCCCANACAATGTTAAACAGGGAGAAAACCGGATT 842
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 AGCCCGAATTNCCCACAAAAATTTAGA---CAGACAAAAACCGCATTAACCGCAGG-AAT 926
consensus_4572#1 AAACCGAGGGACTNGAAAANGNGTGTGTCTCAACTTGCGANCG-GTAAAACGCNGGCNGC 901
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 GAAACACGCAATTCGC---TCCAACTTGGCACCCGTTTAAAACCTGATTCGTAAAATTAC 983
consensus_4572#1 GNGACACATTAGACNGGGATGAAATGTTGTTTGCATCTGGAACATTGACAGANACANGGT 961
consensus_4572#2 ------------------------------------------------------------
consensus_4572#0 ACGGTGAAAATCGCTNTTGCACTNGCGACATTTACACAACACCA--CGGATAACTGTG-- 1039
consensus_4572#1 AC--TGGNACGNCCCACTNGGNAGGGGTTNGCTAGAAAACACCNGGCGGTTNGAAAAGGG 1019
consensus_4572#2 ------------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||