cluster # 4639

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Anopheles gambiae
cluster # 4639 cluster # 4639 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4639#0 length = 1188 sequences # 2

consensus_4639#1 length = 903 sequences # 1

consensusID : consensus_4639#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1188
fasta sequence

                              [GGTAACGCAAGCGCATCGTGTTCCGCGACAAGCCGCTACCTCAGTCCGCTCACTACGGTCGGCAATCTACCGTTCCGGCGCATCTGCAAGGAGTACGGCGTCGACATAACGTGCGGCGAGATGGCCTGTGCCATACCGATCATCAATGGTGCGATCCCAGGAGTGGGCGCTAACGAAGCGCCACTCGAGCGAGGATCTGTTCGGGGTGCAGCTGTGCGGCCACAACCCGAAGCTAGTCACGTACGCGGCCCAAATCATTGCCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGGCTGCCCGATCGATCTCATCTTTAACCAGGGCGGCGGGTAG-TGCGCTGCTGCGCCGCCAGAACGTGCTGAAGGTGATGGTGCAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGTTTACCGTGAAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTGCCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAGCGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCCGTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACCAAGTGTCCTAACATTGCCGGCGTAATGGTTGGCCGTGGGGCGCTGATAAAACCGTGGGTGTTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATGCTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAGACGACGCGGCGCTTCCTGCTCGAGTGGCAATCGTTCCTGTACCGGTACGTGCCGTACGGGCTGCTGGAGCGGCCGCCGCAGCGCATCAACGAGCGGCCGGATGCGTACCGCGGTCGGGACGATTTGGAAACGCTGATGGCATCGCCCAATTGTAACGATTGGGTGAAATTAAGTGAGATGCTGCTTGGACCTGTACCGGAAGGATTTAACTTTGTGCCGAAACACAAAGCCAATGCCTACTGAAAGGGGGAAATGACCGTAAGTGAATGTTGTTTTGCTTTCAAAATTCCTACTTCTCTTTCGAAGGCAGCAAAGGAAAGGATGTAAATAAAGGACTCCAGATGTAAA]

[+] EMBL CNS08L1Z             [GGTAACGCAAGCGCATCGTGTTCCGCGACAAGCCGCTACCTCAGTCCGCTCACTACGGTCGGCAATCTACCGTTCCGGCGCATCTGCAAGGAGTACGGCGTCGACATAACGTGCGGCGAGATGGCCTGTGCCATACCGATCATCAATGGTGCGATCCCAGGAGTGGGCGCTAACGAAGCGCCACTCGAGCGAGGATCTGTTCGGGGTGCAGCTGTGCGGCCACAACCCGAAGCTAGTCACGTACGCGGCCCAAATCATTGCCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGGCTGCCCGATCGATCTCATCTTTAACCAGGGCGGCGGGTAG TGCGCTGCTGCGCCGCCAGAACGTGCTGAAGGTGATGGTGCAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGTTTACCGTGAAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTGCCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAGCGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCCGTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACCAAGTGTCCTAACATTGCCGGCGTAATGGTTGGCCGTGGGGCGCTGATAAAACCGTGGGTGTTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08L20             [                                                                                                                                                                                                                                                                                                     ACACGGGCTGCCCGATCGATCTCATCTTTAACCAGGGCGGC GGTAGTTGCGCTG TGCGCCGCCAGAACGTGCTGAAGGTGATGGTGCAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGTTTACCGTG AAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTGCCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAGCGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGT CGTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACCAAGTGTCCTAACATTGCCGGCGTAATGGTTGGCCGTGGGGCGCTGATAAAACCGTGGGTGTTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATGCTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAGACGACGCGGCGCTTCCTGCTCGAGTGGCAATCGTTCCTGTACCGGTACGTGCCGTACGGGCTGCTGGAGCGGCCGCCGCAGCGCATCAACGAGCGGCCGGATGCGTACCGCGGTCGGGACGATTTGGAAACGCTGATGGCATCGCCCAATTGTAACGATTGGGTGAAATTAAGTGAGATGCTGCTTGGACCTGTACCGGAAGGATTTAACTTTGTGCCGAAACACAAAGCCAATGCCTACTGAAAGGGGGAAATGACCGTAAGTGAATGTTGTTTTGCTTTCAAAATTCCTACTTCTCTTTCGAAGGCAGCAAAGGAAAGGATGTAAATAAAGGACTCCAGATGTAAA]




>consensus_4639#0
GGTAACGCAAGCGCATCGTGTTCCGCGACAAGCCGCTACCTCAGTCCGCTCACTACGGTC
GGCAATCTACCGTTCCGGCGCATCTGCAAGGAGTACGGCGTCGACATAACGTGCGGCGAG
ATGGCCTGTGCCATACCGATCATCAATGGTGCGATCCCAGGAGTGGGCGCTAACGAAGCG
CCACTCGAGCGAGGATCTGTTCGGGGTGCAGCTGTGCGGCCACAACCCGAAGCTAGTCAC
GTACGCGGCCCAAATCATTGCCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGG
CTGCCCGATCGATCTCATCTTTAACCAGGGCGGCGGGTAGTGCGCTGCTGCGCCGCCAGA
ACGTGCTGAAGGTGATGGTGCAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGT
TTACCGTGAAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTG
CCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAG
CGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCC
GTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACC
AAGTGTCCTAACATTGCCGGCGTAATGGTTGGCCGTGGGGCGCTGATAAAACCGTGGGTG
TTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATG
CTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAG
ACGACGCGGCGCTTCCTGCTCGAGTGGCAATCGTTCCTGTACCGGTACGTGCCGTACGGG
CTGCTGGAGCGGCCGCCGCAGCGCATCAACGAGCGGCCGGATGCGTACCGCGGTCGGGAC
GATTTGGAAACGCTGATGGCATCGCCCAATTGTAACGATTGGGTGAAATTAAGTGAGATG
CTGCTTGGACCTGTACCGGAAGGATTTAACTTTGTGCCGAAACACAAAGCCAATGCCTAC
TGAAAGGGGGAAATGACCGTAAGTGAATGTTGTTTTGCTTTCAAAATTCCTACTTCTCTT
TCGAAGGCAGCAAAGGAAAGGATGTAAATAAAGGACTCCAGATGTAAA

consensusID : consensus_4639#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 903
fasta sequence

                              [GGCAGAATCGGCACGAGGATTGCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGGCTGCCCGATAGATCTCATCTTTAACCAGGGGCGGCGGTAGTGCGCTGCTGCGCCGCCAGAACGTGCTGAAGGTGATGGTACAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGTTTACCGTGAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTGCCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAGCGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCCGTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACCAAGTGCCCTAACATTGCCGGCGTAATGGTGGGCCGTGGGGCGCTGATTAAACCGTGGGTGTTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATGCTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAGACGACGCGGCGCTTCCTGCTCGAGTGCATCGTTCCTGTACCGGGTACGTGCCCGTACAGGGCNTGCTGGAAGCGGGCCGGCCGGAGCGCATCAACGAAGCGGGCCGGGACNGCCGTAACCCGCGGTCACGGGACCGATTTGGAAAACGGCCTGATTGGGCATCGGCCCAAACTTGGTTNAGCGAATTGGGGTTGACACACTTACACGTTGAGGACATTGCTGGCNTTTGGGAACCTTGGTTACCCGGGAGAGGACTTTTANCGCTTTGGTNGCCCGAAAACGACCAGAAAAGCCCAATGGCCC]

[+] EMBL BX467763             [GGCAGAATCGGCACGAGGATTGCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGGCTGCCCGATAGATCTCATCTTTAACCAGGGGCGGCGGTAGTGCGCTGCTGCGCCGCCAGAACGTGCTGAAGGTGATGGTACAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGTTTACCGTGAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTGCCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAGCGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCCGTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACCAAGTGCCCTAACATTGCCGGCGTAATGGTGGGCCGTGGGGCGCTGATTAAACCGTGGGTGTTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATGCTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAGACGACGCGGCGCTTCCTGCTCGAGTGCATCGTTCCTGTACCGGGTACGTGCCCGTACAGGGCNTGCTGGAAGCGGGCCGGCCGGAGCGCATCAACGAAGCGGGCCGGGACNGCCGTAACCCGCGGTCACGGGACCGATTTGGAAAACGGCCTGATTGGGCATCGGCCCAAACTTGGTTNAGCGAATTGGGGTTGACACACTTACACGTTGAGGACATTGCTGGCNTTTGGGAACCTTGGTTACCCGGGAGAGGACTTTTANCGCTTTGGTNGCCCGAAAACGACCAGAAAAGCCCAATGGCCC]




>consensus_4639#1
GGCAGAATCGGCACGAGGATTGCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGG
GCTGCCCGATAGATCTCATCTTTAACCAGGGGCGGCGGTAGTGCGCTGCTGCGCCGCCAG
AACGTGCTGAAGGTGATGGTACAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAG
TTTACCGTGAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTG
CCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAG
CGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCC
GTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACC
AAGTGCCCTAACATTGCCGGCGTAATGGTGGGCCGTGGGGCGCTGATTAAACCGTGGGTG
TTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATG
CTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAG
ACGACGCGGCGCTTCCTGCTCGAGTGCATCGTTCCTGTACCGGGTACGTGCCCGTACAGG
GCNTGCTGGAAGCGGGCCGGCCGGAGCGCATCAACGAAGCGGGCCGGGACNGCCGTAACC
CGCGGTCACGGGACCGATTTGGAAAACGGCCTGATTGGGCATCGGCCCAAACTTGGTTNA
GCGAATTGGGGTTGACACACTTACACGTTGAGGACATTGCTGGCNTTTGGGAACCTTGGT
TACCCGGGAGAGGACTTTTANCGCTTTGGTNGCCCGAAAACGACCAGAAAAGCCCAATGG
CCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4639#0      GGTAACGCAAGCGCATCGTGTTCCGCGACAAGCCGCTACCTCAGTCCGCTCACTACGGTC 60
consensus_4639#1      ------------------------------------------------------------
                                                                                  

consensus_4639#0      GGCAATCTACCGTTCCGGCGCATCTGCAAGGAGTACGGCGTCGACATAACGTGCGGCGAG 120
consensus_4639#1      ------------------------------------------------------------
                                                                                  

consensus_4639#0      ATGGCCTGTGCCATACCGATCATCAATGGTGCGATCCCAGGAGTGGGCGCTAACGAAGCG 180
consensus_4639#1      ------------------------------------------------------------
                                                                                  

consensus_4639#0      CCACTCGAGCGAGGATCTGTTCGGGGTGCAGCTGTGCGGCCACAACCCGAAGCTAGTCAC 240
consensus_4639#1      ---------------------------------------------------------GGC 3
                                                                                 *

consensus_4639#0      GTACGCGGCCCAAATCATTGCCGAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGG 300
consensus_4639#1      AGAATCGGCACGAGG-ATTGC-GAGAAGGCGGATGTCGACTTTATCGACCTGAACACGGG 61
                        *  **** * *   ***** **************************************

consensus_4639#0      CTGCCCGATCGATCTCATCTTTAACCAGGGCGGCGGGTAGTGCGCTGCTGCGCCGCCAGA 360
consensus_4639#1      CTGCCCGATAGATCTCATCTTTAACCAGGGGCGGCGGTAGTGCGCTGCTGCGCCGCCAGA 121
                      ********* ********************  *  *************************

consensus_4639#0      ACGTGCTGAAGGTGATGGTGCAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGT 420
consensus_4639#1      ACGTGCTGAAGGTGATGGTACAGAGCTGTTCGCGCCTGTTGGCCGACTACGGCAAAGAGT 181
                      ******************* ****************************************

consensus_4639#0      TTACCGTGAAAGACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTG 480
consensus_4639#1      TTACCGTGAA-GACGCGCATCGGCATCTACAACAACAAGCTGATCGCGCACGAGATGGTG 240
                      ********** *************************************************

consensus_4639#0      CCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAG 540
consensus_4639#1      CCAAAGTTTGAGGACTGGGGAGCGAGCCTGATCACGATCCACGGGCGGACGAAGGAGCAG 300
                      ************************************************************

consensus_4639#0      CGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCC 600
consensus_4639#1      CGCTACACCAAGCGGGCCGACTGGGAGTATCTGCAGCAGTGTGCGACCCAGGCCCAGTCC 360
                      ************************************************************

consensus_4639#0      GTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACC 660
consensus_4639#1      GTGCCGGTGTTTGGCAATGGGGACATCTTTGGCTACGAGGATTACGAACACATTCGCACC 420
                      ************************************************************

consensus_4639#0      AAGTGTCCTAACATTGCCGGCGTAATGGTTGGCCGTGGGGCGCTGATAAAACCGTGGGTG 720
consensus_4639#1      AAGTGCCCTAACATTGCCGGCGTAATGGTGGGCCGTGGGGCGCTGATTAAACCGTGGGTG 480
                      ***** *********************** ***************** ************

consensus_4639#0      TTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATG 780
consensus_4639#1      TTTCAGGAGATTAAGGAGCGGAAAACGCTCGATCCGTCCAGCGGGGAGCGGTTCGAGATG 540
                      ************************************************************

consensus_4639#0      CTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAG 840
consensus_4639#1      CTGAAGCGGTACGTGAATTACGGGCTGGAGCACTGGGGCAGCGATACGAAGGGTGTGGAG 600
                      ************************************************************

consensus_4639#0      ACGACGCGGCGCTTCCTGCTCGAGTGGCAATCGTTCCTGTACCGG-TACGTGCC-GTACG 898
consensus_4639#1      ACGACGCGGCGCTTCCTGCTCGAGTGC--ATCGTTCCTGTACCGGGTACGTGCCCGTACA 658
                      **************************   **************** ******** **** 

consensus_4639#0      GG--CTGCTGGA-GCGGCC--GCCGCAGCGCATCAACGAGCGGCCGGATGCGTACCGCGG 953
consensus_4639#1      GGGCNTGCTGGAAGCGGGCCGGCCGGAGCGCATCAACGAA---------GCG------GG 703
                      **   ******* **** *  **** *************          ***      **

consensus_4639#0      TCGGGACGATTTGGAAACGCTGATGGCATCGCCCAATTGTAACGATTGGGTGAAATTAAG 1013
consensus_4639#1      CCGGGACNGCC-GTAACCCGCGGTCACGGGACCGATTTGGAA--AACGGCC-----TGAT 755
                       ******     * ** *   * *  *    ** * *** **  *  **       * * 

consensus_4639#0      TGAGATGCTGCTTGGACCTGTACCGGAAGGATTTAACTTTGTGCCGAAACACAAAGCCAA 1073
consensus_4639#1      TGGGCATCGGCCCAAACTTGGTTNAG-------CGAATTGGGGTTGACACACTTACACGT 808
                      ** *   * **    ** **     *         * ** * *  ** ****  *  *  

consensus_4639#0      TGCCTACTGAAAGGGGGAAATGACCGTAAGTGAATGTTGTTTTGCTTTCAAAATTCCTAC 1133
consensus_4639#1      TG---------AGGACATTGCTGGCNTTTGGGAACCTTGGTTACCCGGGAGAGGACTTTT 859
                      **         ***          * *  * ***  *** **  *    * *   * *  

consensus_4639#0      TTCTCTTTCGAAGGCAGCAAAGGAAAGGATGTAAATAAAGGACTCCAGATGTAAA 1188
consensus_4639#1      ANCGCTTTGGTNGCCCGAAAACGACCAGAAAAGCCCAATGGCCC----------- 903
                        * **** *  * * * *** **   **       ** ** *