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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4665#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 942 fasta sequence
[CCGGTGGAATCGAGATCGGCCAGGACGGAGTGAGCAGTTTGGGTAACGTGTCGTGCAAGAAGAGCCAAGAGTGGTGAAAGGCAGGAGTGCCAGAGAGAGAGAAAGCGAGAAGAGGAATAGAGAAGCGTTACTACCATCTGCAAGCAAGCGAGTGTGAAGAGAAAAGGAGGAGGAAGAAGAAAACCCCGTGATTCGAAAGTTGAACGTGCTCTTATCCAACTAAACACACGCACACATAACTTGCTCCCAACCACTACCCCAGGCCCAAACCAACATCGTCATCATCAGCTGCCCCCCCTCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTTTGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAG--GTGAGGG-GTTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGAAATCGTGCGTGCGTGCGTTTATCTGTGTGTGTGTTTGTTACGACGTTATTTTTCTACGCCGTGACGTTGTCACTCTTGACTGTATGTGATCGATAAACCCAGCAGCAGCTTGCCAGCAAATCCCGTTCAATCGTGTCTAACAAAGCAACCGACGAAAAGTTGCAGCAGGAAGCGAAGCAAAAAAGAAACCTTGTGATTTTTTTTTCTTGTTCCTGCGTGTTGCCAACACTCTCCCCCCACCTTCCAGCCCGCGCGCGCGTCATCAAGGCAGGCAAAAACGTGTTACAAAGCAGGCGCAGCTGCCGCCGTGTATGTTGTGTGTGTGTGTATGTGTGGTTAGCAAATCAACCAATAGAGAGAGTGGCGAAGCGCACCAATACTACCTGGATCTCACGTACAACAGTACGCAACAGCGAAATTTGCCCTTCTATTTTTTCGCCGTACCTGTGTGTGTATCGATCGTACGTGT]
[+] EMBL BM595462 [CCGGTGGAATCGAGATCGGCCAGGACGGAGTGAGCAGTTTGGGTAACGTGTCGTGCAAGAAGAGCCAAGAGTGGTGAAAGGCAGGAGTGCCAGAGAGAGAGAAAGCGAGAAGAGGAATAGAGAAGCGTTACTACCATCTGCAAGCAAGCGAGTGTGAAGAGAAAAGGAGGAGGAAGAAGAAAACCCCGTGATTCGAAAGTTGAACGTGCTCTTATCCAACTAAACACACGCACACATAACTTGCTCCCAACCACTACCCCAGGCCCAAACCAACATCGTCATCATCAGCTGCCCCCCCTCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTTTGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAG GTGAGGG GTTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGAAATCGTGCGTGCGTGCGTTTATCTGTGTGTGTGTTTGTTACGACGTTATTTTTCTACGCCGTGACGTTGTCACTCTTGACTGTATGTGATCGATAAACCCAGCAGCAGCTTGCCAGCAAATCCCGTTCAATCGTGTCTAACAAAGCAACCGACGAAAAGTTGCAGCAGGAAGCGAAGCAAAAAAGAAACCTTGTGA ]
[+] EMBL BM643927 [ CCGCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTTTGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAGGTGTGAGGGTTTTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGAAAT CGTGCGTGCGTTTATC TGTGTGTGTTTGTTACGACGTTATTTTTCTACGCCGTGACGTTGTCACTCTTGACTGTATGTGATCGATAAACCCAGCAGCAGCTTGCCAGCAAATCCCGTTCAATCGTGTCTAACAAAGCAACCGACGAAAAGTTGCAGCAGGAAGCGAAGCAAAAAAGAAACCTTGTGATTTTTTTTTCTTGTTCCTGCGTGTTGCCAACACTCTCCCCCCACCTTCCAGCCCGCGCGCGCGTCATCAAGGCAGGCAAAAACGTGTTACAAAGCAGGCGCAGCTGCCGCCGTGTATGTTGTGTGTGTGTGTATGTGTGGTTAGCAAATCAACCAATAGAGAGAGTGGCGAAGCGCACCAATACTACCTGGATCTCACGTACAACAGTACGCAACAGCGAAATTTGCCCTTCTATTTTTTCGCCGTACCTGTGTGTGTATCGATCGTACGTGT]
consensusID : consensus_4665#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence
[CCGCTCCGTGGAATCGAGATCGGCCAGGACGGAGTGAGCAGTTTGGGTAACGTGTCGTGCAAGAAGAGCCAAGAGTGGTGAAAGGCAGGAGTGCCAGAGAGAGAGAGAGCGAGAAGAGGAATAGAGAAGCGTTACTACCATCTGCAAGCAAGCGAGTGTGAAGAGAAAAGGAGGAGGAAGAAGAAAACCCCGTGATTCGAAAGTTGAACGTGCTCTTATCCAACTAAACACACGCACACATAACTTGCTCCCAACCACTACCCAGGCCCAAACCAACATCGTCATCATCAGCTGCCCCCCCTCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTTTGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAGGTGTGAGGGTTTTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGAAATCGTGCGTGCGTGCGTTTATCTCTGTGTGTTTGGTACGACGTTATTTTTCTACGCCGTGACGTTGTCACTCTTGACTGTATGTGATCGATACACCCAGCAGCAGTAGCAGCAGCAGCTTGCCAGCAAATCCC]
[+] EMBL BM630078 [CCGCTCCGTGGAATCGAGATCGGCCAGGACGGAGTGAGCAGTTTGGGTAACGTGTCGTGCAAGAAGAGCCAAGAGTGGTGAAAGGCAGGAGTGCCAGAGAGAGAGAGAGCGAGAAGAGGAATAGAGAAGCGTTACTACCATCTGCAAGCAAGCGAGTGTGAAGAGAAAAGGAGGAGGAAGAAGAAAACCCCGTGATTCGAAAGTTGAACGTGCTCTTATCCAACTAAACACACGCACACATAACTTGCTCCCAACCACTACCCAGGCCCAAACCAACATCGTCATCATCAGCTGCCCCCCCTCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTTTGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAGGTGTGAGGGTTTTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGAAATCGTGCGTGCGTGCGTTTATCTCTGTGTGTTTGGTACGACGTTATTTTTCTACGCCGTGACGTTGTCACTCTTGACTGTATGTGATCGATACACCCAGCAGCAGTAGCAGCAGCAGCTTGCCAGCAAATCCC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4665#0 ----CCGGTGGAATCGAGATCGGCCAGGACGGAGTGAGCAGTTTGGGTAACGTGTCGTGC 56
consensus_4665#1 CCGCTCCGTGGAATCGAGATCGGCCAGGACGGAGTGAGCAGTTTGGGTAACGTGTCGTGC 60
* *****************************************************
consensus_4665#0 AAGAAGAGCCAAGAGTGGTGAAAGGCAGGAGTGCCAGAGAGAGAGAAAGCGAGAAGAGGA 116
consensus_4665#1 AAGAAGAGCCAAGAGTGGTGAAAGGCAGGAGTGCCAGAGAGAGAGAGAGCGAGAAGAGGA 120
********************************************** *************
consensus_4665#0 ATAGAGAAGCGTTACTACCATCTGCAAGCAAGCGAGTGTGAAGAGAAAAGGAGGAGGAAG 176
consensus_4665#1 ATAGAGAAGCGTTACTACCATCTGCAAGCAAGCGAGTGTGAAGAGAAAAGGAGGAGGAAG 180
************************************************************
consensus_4665#0 AAGAAAACCCCGTGATTCGAAAGTTGAACGTGCTCTTATCCAACTAAACACACGCACACA 236
consensus_4665#1 AAGAAAACCCCGTGATTCGAAAGTTGAACGTGCTCTTATCCAACTAAACACACGCACACA 240
************************************************************
consensus_4665#0 TAACTTGCTCCCAACCACTACCCCAGGCCCAAACCAACATCGTCATCATCAGCTGCCCCC 296
consensus_4665#1 TAACTTGCTCCCAACCACTACCC-AGGCCCAAACCAACATCGTCATCATCAGCTGCCCCC 299
*********************** ************************************
consensus_4665#0 CCTCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTT 356
consensus_4665#1 CCTCGGAGTGAACGGAAGAAGAAATTGTGCCCATTCCACGGTCTTCTTCTTCTGCCGTTT 359
************************************************************
consensus_4665#0 TGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAGGTGAGGG 416
consensus_4665#1 TGGCCTCTGTACAATCGAGGTTACCACACGAGGACGGTGTGTGCCAAAACGAGGTGTGAG 419
******************************************************** * *
consensus_4665#0 G---TTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGA 473
consensus_4665#1 GGTTTTTTTCTTCGCCAAAGAGAGAGAGCGAGCCAGCGCGAGCGGAAAAGAAAAAGCGGA 479
* ********************************************************
consensus_4665#0 AATCGTGCGTGCGTGCGTTTATCTGTGTGTGTGTTTGTTACGACGTTATTTTTCTACGCC 533
consensus_4665#1 AATCGTGCGTGCGTGCGTTTATCTCTGTGTGT--TTGGTACGACGTTATTTTTCTACGCC 537
************************ ******* *** **********************
consensus_4665#0 GTGACGTTGTCACTCTTGACTGTATGTGATCGATAAACCCAGCAGCAGCTTGCCAGCAAA 593
consensus_4665#1 GTGACGTTGTCACTCTTGACTGTATGTGATCGATACACCCAGCAGCAG--TAGCAGCAGC 595
*********************************** ************ * *****
consensus_4665#0 TCCCGTTCAATCGTGTCTAACAAAGCAACCGACGAAAAGTTGCAGCAGGAAGCGAAGCAA 653
consensus_4665#1 AGCTTGCCAGCAAATCCC------------------------------------------ 613
* ** *
consensus_4665#0 AAAAGAAACCTTGTGATTTTTTTTTCTTGTTCCTGCGTGTTGCCAACACTCTCCCCCCAC 713
consensus_4665#1 ------------------------------------------------------------
consensus_4665#0 CTTCCAGCCCGCGCGCGCGTCATCAAGGCAGGCAAAAACGTGTTACAAAGCAGGCGCAGC 773
consensus_4665#1 ------------------------------------------------------------
consensus_4665#0 TGCCGCCGTGTATGTTGTGTGTGTGTGTATGTGTGGTTAGCAAATCAACCAATAGAGAGA 833
consensus_4665#1 ------------------------------------------------------------
consensus_4665#0 GTGGCGAAGCGCACCAATACTACCTGGATCTCACGTACAACAGTACGCAACAGCGAAATT 893
consensus_4665#1 ------------------------------------------------------------
consensus_4665#0 TGCCCTTCTATTTTTTCGCCGTACCTGTGTGTGTATCGATCGTACGTGT 942
consensus_4665#1 -------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||