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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4726#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 727 fasta sequence
[CCGGAGCAACCAAACCGAACGGATCGAAAACAACAACACCCTCTGCCGGGCGCACGGTCCCGCAGCGTGGAACGCACAACGACAATCGGGTTAAGCAATAGCTCGAAGAAGCAAGAAACAAACAAAACAAAACAAAAAGAAGCAAAAATAAGGAAAAGAAAGGAAACGGAGAAACGAACGCTTGTGAACCACTCCAGTGTGTTGTTGTGGCGTGTGTGCGCGTACATGCTGCACCCAGTTTGATGTGTAAATGTTACATTTGTTCTGCGGCGGTGAGCAAAACCCCCAAACTACTACGGTGTGCCTGAGAGTGGGTGTGTAGTGCATATCTTAAAAAAAAACGAGATAGTGAGTAGAGCTAGTAGAAGAGTATACGAAACAGTAACGAAACCCTATTGCCGCCGGTGCAGCAGCAGCAGCAGCAACAGCAATTGATGCGGGTGATGCGCGATCGGTCTTCATCTCGCGTCGCTGTCGCTGTTTGTTGGTTGGGTGGACTCGACCCGCACAAACGAGGCGAGAGAAAGCGTCCAGGGCAAGCAAGTGAGTGAGTGGGCGATCGTAAGTGTGCGTGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTGTGAATGTGCGTACCAACGGATTTGCTCTGGAGGCAGAAAAGCCACTGGATCTGGAGGACCTTCATCCGTCAATCAAGCATAAGAGCAGCACAGAACAGATCAACAGCACACAGACGTC]
[+] EMBL BM637289 [CCGGAGCAACCAAACCGAACGGATCGAAAACAACAACACCCTCTGCCGGGCGCACGGTCCCGCAGCGTGGAACGCACAACGACAATCGGGTTAAGCAATAGCTCGAAGAAGCAAGAAACAAACAAAACAAAACAAAAAGAAGCAAAAATAAGGAAAAGAAAGGAAACGGAGAAACGAACGCTTGTGAACCACTCCAGTGTGTTGTTGTGGCGTGTGTGCGCGTACATGCTGCACCCAGTTTGATGTGTAAATGTTACATTTGTTCTGCGGCGGTGAGCAAAACCCCCAAACTACTACGGTGTGCCTGAGAGTGGGTGTGTAGTGCATATCTTAAAAAAAAACGAGATAGTGAGTAGAGCTAGTAGAAGAGTATACGAAACAGTAACGAAACCCTATTGCCGCCGGTGCAGCAGCAGCAGCAGCAACAGCAATTGATGCGGGTGATGCGCGATCGGTCTTCATCTCGCGTCGCTGTCGCTGTTTGTTGGTTGGGTGGACTCGACCCGCACAAACGAGGCGAGAGAAAGCGTCCAGGGCAAGCAAGTGAGTGAGTGGGCGATCGTAAGTGTGCGTGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGATGTGTGAATGTGCGTACCAACGGATTTGCTCTGGAGGCAGAAAAGCCACTGGATCTGGAGGACCTTCATCCGTCAATCAAGCATAAGAGCAGCACAGAACAGATCAACAGCACACAGACGTC]
consensusID : consensus_4726#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 627 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGTTTGTTCTGCGGCGGTGAGCAAAACCCCCAAACTACTACGGTGTGCCTGAGAGTGGGTGTGTAGTGCATATCTTAAAAAAAACGAGATAGTGAGTAGAGCTAGTAGAAGAGTATACGAAACAGTAACGAAATCCTATTGCCGCCGGTGCAGCAGCAGCAGCAGCAACAGCAATTGATGCGGGTGATGCGCGATCTCCCCACACAGCACGGCCAGATGCCGCACGGGACGGGTGGACTGTCACAGCTGGCGGGGCGTCGACGCCCGGACGGACGGACGACAGGGGGGCGCCGGGGCAGGGTGCCGACGACGACGCTGGTGCTGCTCGCGATCCTGCTGCAGCTGATGGATCTTGGGGGGATGGGCCCGGGCGGCGGTGGCGGCACGATGCTGGCGGAGGCGGCCTGTTGAGCCGCGGGCCAGCTGGTGGGACCCGACCGTGGACGATTGCGTCCCGTGCCGGGTCTGTGCCGACCATCAGGTCGTGCTGCGCCCGTGCCAGGACTACATGAACACGGTGTGCGGCACGATGAAGGACCTGACGGCGTCGGCTCATCGCCCGTACCCCCATCTGCCCCGAGGGGAACGGTAACGGGATCGTG]
[+] EMBL BM588704 [CCGCGGACGCGTGGGCGGACGCGTGGGTTTGTTCTGCGGCGGTGAGCAAAACCCCCAAACTACTACGGTGTGCCTGAGAGTGGGTGTGTAGTGCATATCTTAAAAAAAACGAGATAGTGAGTAGAGCTAGTAGAAGAGTATACGAAACAGTAACGAAATCCTATTGCCGCCGGTGCAGCAGCAGCAGCAGCAACAGCAATTGATGCGGGTGATGCGCGATCTCCCCACACAGCACGGCCAGATGCCGCACGGGACGGGTGGACTGTCACAGCTGGCGGGGCGTCGACGCCCGGACGGACGGACGACAGGGGGGCGCCGGGGCAGGGTGCCGACGACGACGCTGGTGCTGCTCGCGATCCTGCTGCAGCTGATGGATCTTGGGGGGATGGGCCCGGGCGGCGGTGGCGGCACGATGCTGGCGGAGGCGGCCTGTTGAGCCGCGGGCCAGCTGGTGGGACCCGACCGTGGACGATTGCGTCCCGTGCCGGGTCTGTGCCGACCATCAGGTCGTGCTGCGCCCGTGCCAGGACTACATGAACACGGTGTGCGGCACGATGAAGGACCTGACGGCGTCGGCTCATCGCCCGTACCCCCATCTGCCCCGAGGGGAACGGTAACGGGATCGTG]
consensusID : consensus_4726#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 478 fasta sequence
[TCCCCGAGGTTAACCCAACTATACGGTGTGCTGAGAGTGGTGTTTTGCNTATCTTAAAAAAACGAGATAGTGAGTAGAGCTAGTAGAAGAGTATACGAAACAGTAACGAAATCCTATTGCCGCGTGCAGCAGCAGCAGCAGCAACAGCAATTGATGCGGGTNATGCGCGATCTCCCCACACAGCACGGCAGATGCCGCACGGGACGGGTGGACTGTCACAGCTGGCGGGGCGTCGACGCCCGGACGGACGGACGACAGGGGGGCGCCGGGGCAGTGGTGCCGACGACGACGCTGGTGCTGCTCGCGATCCTGCTGCAGCTGATGGATCTGGGGGATGGGCCGNGCGGCGGTGGCGGCACGATGCTGGCGGAGCGGCCTGTGAGCCGCGGGCCAGGCTGGTGGGACCCGACCGTGGACGATTGCGTCCCGTGCCGGGTCTGTGCCGACACATCAGGTCGTGCTGCGCCCGTGCCAGGGA]
[+] EMBL AL934513 [TCCCCGAGGTTAACCCAACTATACGGTGTGCTGAGAGTGGTGTTTTGCNTATCTTAAAAAAACGAGATAGTGAGTAGAGCTAGTAGAAGAGTATACGAAACAGTAACGAAATCCTATTGCCGCGTGCAGCAGCAGCAGCAGCAACAGCAATTGATGCGGGTNATGCGCGATCTCCCCACACAGCACGGCAGATGCCGCACGGGACGGGTGGACTGTCACAGCTGGCGGGGCGTCGACGCCCGGACGGACGGACGACAGGGGGGCGCCGGGGCAGTGGTGCCGACGACGACGCTGGTGCTGCTCGCGATCCTGCTGCAGCTGATGGATCTGGGGGATGGGCCGNGCGGCGGTGGCGGCACGATGCTGGCGGAGCGGCCTGTGAGCCGCGGGCCAGGCTGGTGGGACCCGACCGTGGACGATTGCGTCCCGTGCCGGGTCTGTGCCGACACATCAGGTCGTGCTGCGCCCGTGCCAGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4726#1 ------------------------------------------------------------
consensus_4726#2 ------------------------------------------------------------
consensus_4726#0 CCGGAGCAACCAAACCGAACGGATCGAAAACAACAACACCCTCTGCCGGGCGCACGGTCC 60
consensus_4726#1 ------------------------------------------------------------
consensus_4726#2 ------------------------------------------------------------
consensus_4726#0 CGCAGCGTGGAACGCACAACGACAATCGGGTTAAGCAATAGCTCGAAGAAGCAAGAAACA 120
consensus_4726#1 ------------------------------------------------------------
consensus_4726#2 ------------------------------------------------------------
consensus_4726#0 AACAAAACAAAACAAAAAGAAGCAAAAATAAGGAAAAGAAAGGAAACGGAGAAACGAACG 180
consensus_4726#1 ----------------------------------------------------CCGCGGAC 8
consensus_4726#2 ------------------------------------------------------------
consensus_4726#0 CTTGTGAACCACTCCAGTGTGTTGTTGTGGCGTGTGTGCGCGTACATGCTGCACCCAGTT 240
consensus_4726#1 GCGTGGGCGGACGCGTGGGTTTGTTCTGCGGCGGTGAGCAAAACCCCCAAACTACTACGG 68
consensus_4726#2 ------------------------------TCCCCGAGGTTAACCC---AACTA-TACGG 26
consensus_4726#0 TGATGTGTAAATGT-TACATTTGTTCTGCGGCGGTGAGCAAAACCCCCAAACTACTACGG 299
* *** ***** ***** *****
consensus_4726#1 TGTGCCTGAGAGTGGGTGTGTAGTGCATATCTTAAAAAAAA-CGAGATAGTGAGTAGAGC 127
consensus_4726#2 TGTGC-TGAGAGTGG---TGTTTTGCNTATCTTAAAAAAA--CGAGATAGTGAGTAGAGC 80
consensus_4726#0 TGTGCCTGAGAGTGGGTGTGTAGTGCATATCTTAAAAAAAAACGAGATAGTGAGTAGAGC 359
***** ********* *** *** ************* ******************
consensus_4726#1 TAGTAGAAGAGTATACGAAACAGTAACGAAATCCTATTGCCGCCGGTGCAGCAGCAGCAG 187
consensus_4726#2 TAGTAGAAGAGTATACGAAACAGTAACGAAATCCTATTGCCGC--GTGCAGCAGCAGCAG 138
consensus_4726#0 TAGTAGAAGAGTATACGAAACAGTAACGAAACCCTATTGCCGCCGGTGCAGCAGCAGCAG 419
******************************* *********** ***************
consensus_4726#1 CAGCAACAGCAATTGATGCGGGTGATGCGCGATCTCCCCACACAGCACGGCCAGATGCCG 247
consensus_4726#2 CAGCAACAGCAATTGATGCGGGTNATGCGCGATCTCCCCACACAGCACGGC-AGATGCCG 197
consensus_4726#0 CAGCAACAGCAATTGATGCGGGTGATGCGCGATCGGTCTTCATCTCGCGTC--GCTGTCG 477
*********************** ********** * ** * ** * * ** **
consensus_4726#1 C-ACGGGACGGGTGGACTGTCACAGCTGGCGGGGCGTCGACGCCCGGACGGACGGACGAC 306
consensus_4726#2 C-ACGGGACGGGTGGACTGTCACAGCTGGCGGGGCGTCGACGCCCGGACGGACGGACGAC 256
consensus_4726#0 CTGTTTGTTGGTTGGGTGGACTCGACCCGCACAA--ACGAGGC---GAGAGA-AAGCGTC 531
* * ** *** * * * * ** *** ** ** ** ** *
consensus_4726#1 AGGGGGGCGCCGGGGCAG-GGTGCCGACGACGACGCTGGTGCTGCTCGCGATCCTGCTGC 365
consensus_4726#2 AGGGGGGCGCCGGGGCAGTGGTGCCGACGACGACGCTGGTGCTGCTCGCGATCCTGCTGC 316
consensus_4726#0 CAGGGCAAGCAAGTGAGTGAGTG--GGCGATCGTAAGTGTGC-GTGCGCGTGTGTGTGTG 588
*** ** * * *** * *** **** * **** **
consensus_4726#1 AGCTGATGGATCTTGGGGGGATGGGCCCGGGCGGCGGTGGCGGCACGATGCTGGCGGAGG 425
consensus_4726#2 AGCTGATGGATCT--GGGGGATGGGCC-GNGCGGCGGTGGCGGCACGATGCTGGCGGAG- 372
consensus_4726#0 TGTGTGTGTGTGTGTGATGTGTGAATGTGCGTACCAACGGATTTGCTCTGGAGGCAGAA- 647
* ** * * * * ** * * * ** * ** *** **
consensus_4726#1 CGGCCTGTTGAGCCGCGGGCCAG-CTGGTGGGACCCGACCGTGGACGATTGCGTCCCGTG 484
consensus_4726#2 CGGCCTGT-GAGCCGCGGGCCAGGCTGGTGGGACCCGACCGTGGACGATTGCGTCCCGTG 431
consensus_4726#0 AAGCCACTGGATCTGGAGGACC--TTCATCCG--TCAATCAAGCATAAGAGCAGCACAGA 703
*** * ** * * ** * * * * * * * * * * ** * *
consensus_4726#1 CCGGGTCTGTGCCGAC-CATCAGGTCGTGCTGCGCCCGTGCCAGGACTACATGAACACGG 543
consensus_4726#2 CCGGGTCTGTGCCGACACATCAGGTCGTGCTGCGCCCGTGCCAGGGA------------- 478
consensus_4726#0 ACAGATCAACAGC-ACACAG-ACGTC---------------------------------- 727
* * ** * ** ** * ***
consensus_4726#1 TGTGCGGCACGATGAAGGACCTGACGGCGTCGGCTCATCGCCCGTACCCCCATCTGCCCC 603
consensus_4726#2 ------------------------------------------------------------
consensus_4726#0 ------------------------------------------------------------
consensus_4726#1 GAGGGGAACGGTAACGGGATCGTG 627
consensus_4726#2 ------------------------
consensus_4726#0 ------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||