cluster # 4732

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Anopheles gambiae
cluster # 4732 cluster # 4732 Sequences # 3 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4732#0 length = 779 sequences # 1

consensus_4732#1 length = 648 sequences # 1
consensus_4732#2 length = 636 sequences # 1

consensusID : consensus_4732#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 779
fasta sequence

                              [TTCGTGGACACGCTGAGCGACACGTCTCAGCTGAAGGGTGTCGAGTGCTTTACCTTCACCTACAAGGCGCAGTGGCCGGTGTCGATCGTGCTGAACCTGTGGACCATCTCGAAGTACCAGATGATCTTCCGGCAGCTCTTCTACCTGAAGTACGTCGAGCGCATCCTTTGCCGGGTGTGGATCGCCAACAACGAGACGCGCCAGTTTGCGCCGAACCCGGCCAAGCTGTACCGGTCCGCGTTTACCCTGCGCCAGAAGATGCTGATCGCCATCCAGAGCTTCGAGTCGTACATGATGATCGAGGTGATCGAACCGAACTGGCACATTTTTTACCAAAACATGAAACAGGTCAAAAACATTGATGATGTGTTGAACTATCATCAGGACTTTCTGGATCAATGTTTGAAGAATTGCATGCTTACCGAGCCCGATTTGCTTAAACCGATCATCAATCTATGCAATATATGCATCAAATTTTGTGACTTTCTAGCGACCGCAACTACCATGGCACCGACGGAAACGTTCTCGGAGCGGGTGGAACAATTTCGCCACGATTTTACCGACCAGCTCATGACGCTGCTGCGCAAGATTGCCGACGTTGCGACGTTAAGCACCTCAGAACGTTTTATCAACCTCATTTACCGAATCAACTTCAACTCGTACTACAGTGAGACGAACGAAAACTAGAGGAAAGGTAACCCACCATCTGTGAGCAAAAAGGAAGGAGGAAAAAAAAGTACAACTCTTAAAAAAAAGCATCCCCGCTTGCCAAACTCTGT]

[+] EMBL BX612710             [TTCGTGGACACGCTGAGCGACACGTCTCAGCTGAAGGGTGTCGAGTGCTTTACCTTCACCTACAAGGCGCAGTGGCCGGTGTCGATCGTGCTGAACCTGTGGACCATCTCGAAGTACCAGATGATCTTCCGGCAGCTCTTCTACCTGAAGTACGTCGAGCGCATCCTTTGCCGGGTGTGGATCGCCAACAACGAGACGCGCCAGTTTGCGCCGAACCCGGCCAAGCTGTACCGGTCCGCGTTTACCCTGCGCCAGAAGATGCTGATCGCCATCCAGAGCTTCGAGTCGTACATGATGATCGAGGTGATCGAACCGAACTGGCACATTTTTTACCAAAACATGAAACAGGTCAAAAACATTGATGATGTGTTGAACTATCATCAGGACTTTCTGGATCAATGTTTGAAGAATTGCATGCTTACCGAGCCCGATTTGCTTAAACCGATCATCAATCTATGCAATATATGCATCAAATTTTGTGACTTTCTAGCGACCGCAACTACCATGGCACCGACGGAAACGTTCTCGGAGCGGGTGGAACAATTTCGCCACGATTTTACCGACCAGCTCATGACGCTGCTGCGCAAGATTGCCGACGTTGCGACGTTAAGCACCTCAGAACGTTTTATCAACCTCATTTACCGAATCAACTTCAACTCGTACTACAGTGAGACGAACGAAAACTAGAGGAAAGGTAACCCACCATCTGTGAGCAAAAAGGAAGGAGGAAAAAAAAGTACAACTCTTAAAAAAAAGCATCCCCGCTTGCCAAACTCTGT]




>consensus_4732#0
TTCGTGGACACGCTGAGCGACACGTCTCAGCTGAAGGGTGTCGAGTGCTTTACCTTCACC
TACAAGGCGCAGTGGCCGGTGTCGATCGTGCTGAACCTGTGGACCATCTCGAAGTACCAG
ATGATCTTCCGGCAGCTCTTCTACCTGAAGTACGTCGAGCGCATCCTTTGCCGGGTGTGG
ATCGCCAACAACGAGACGCGCCAGTTTGCGCCGAACCCGGCCAAGCTGTACCGGTCCGCG
TTTACCCTGCGCCAGAAGATGCTGATCGCCATCCAGAGCTTCGAGTCGTACATGATGATC
GAGGTGATCGAACCGAACTGGCACATTTTTTACCAAAACATGAAACAGGTCAAAAACATT
GATGATGTGTTGAACTATCATCAGGACTTTCTGGATCAATGTTTGAAGAATTGCATGCTT
ACCGAGCCCGATTTGCTTAAACCGATCATCAATCTATGCAATATATGCATCAAATTTTGT
GACTTTCTAGCGACCGCAACTACCATGGCACCGACGGAAACGTTCTCGGAGCGGGTGGAA
CAATTTCGCCACGATTTTACCGACCAGCTCATGACGCTGCTGCGCAAGATTGCCGACGTT
GCGACGTTAAGCACCTCAGAACGTTTTATCAACCTCATTTACCGAATCAACTTCAACTCG
TACTACAGTGAGACGAACGAAAACTAGAGGAAAGGTAACCCACCATCTGTGAGCAAAAAG
GAAGGAGGAAAAAAAAGTACAACTCTTAAAAAAAAGCATCCCCGCTTGCCAAACTCTGT

consensusID : consensus_4732#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 648
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGGGCTGGTCGAGTCGGCTGCGGCGCCGTTCATGGAGATGCTGGAGCTGTGGATCTACCGGGGCGTCATTAACGATCCGCAGCAGGAGTTTTTCATCGACCACAGCTCGATGGAGCTGACCGAGAACGAGCTGGTCGACTACTGGGAGAAGCAGTACACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACATGCGGACATCATACTGCGCACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGGCGGGGCCGAGTTTCAACCGGGCAATGCGAACGGCGGCGGCGGCGGCGCAACGACGACTGATCTGCTCAACGCGTCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCACACTTCGACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTGAATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGCTGTCCGTCAAGCGCTACTTTCTGCTGCAGCAGGGCGACTTCATTACCGAGTTTATGGACGCGGTCGAGGAGGATCTGCGCAAGAGCGTGGACACGCTGCACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGCTGGGGCTG]

[+] EMBL BM591164             [CCGCGGACGCGTGGGCGGACGCGTGGGCTGGTCGAGTCGGCTGCGGCGCCGTTCATGGAGATGCTGGAGCTGTGGATCTACCGGGGCGTCATTAACGATCCGCAGCAGGAGTTTTTCATCGACCACAGCTCGATGGAGCTGACCGAGAACGAGCTGGTCGACTACTGGGAGAAGCAGTACACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACATGCGGACATCATACTGCGCACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGGCGGGGCCGAGTTTCAACCGGGCAATGCGAACGGCGGCGGCGGCGGCGCAACGACGACTGATCTGCTCAACGCGTCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCACACTTCGACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTGAATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGCTGTCCGTCAAGCGCTACTTTCTGCTGCAGCAGGGCGACTTCATTACCGAGTTTATGGACGCGGTCGAGGAGGATCTGCGCAAGAGCGTGGACACGCTGCACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGCTGGGGCTG]




>consensus_4732#1
CCGCGGACGCGTGGGCGGACGCGTGGGCTGGTCGAGTCGGCTGCGGCGCCGTTCATGGAG
ATGCTGGAGCTGTGGATCTACCGGGGCGTCATTAACGATCCGCAGCAGGAGTTTTTCATC
GACCACAGCTCGATGGAGCTGACCGAGAACGAGCTGGTCGACTACTGGGAGAAGCAGTAC
ACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACATGCGGACATCATACTGCGC
ACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGGCGGGGCCGAGTTTCAACCGGGCAAT
GCGAACGGCGGCGGCGGCGGCGCAACGACGACTGATCTGCTCAACGCGTCGAGCGCGACG
GCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCACACTTCGACCAGTCGTACCTG
GACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTGAATCTCATCATGAAC
AAGTACGATCTGATGGGCCGGCTGCTGTCCGTCAAGCGCTACTTTCTGCTGCAGCAGGGC
GACTTCATTACCGAGTTTATGGACGCGGTCGAGGAGGATCTGCGCAAGAGCGTGGACACG
CTGCACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGCTGGGGCTG

consensusID : consensus_4732#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 636
fasta sequence

                              [CCGCCCACGCGTCCGGGGAGAAGCAGTACACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACACGCGGACATCATACTGCGCACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGGCGGGGCTGAGTTTCAACCGGGCAATGCGAACGGCGGCGGCGGCTTCGGCGCCACCACGACGACCGATCTGCTCAACGCGTCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCACACTTCGACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTGAATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGCTGTCCGTCAAGCGCTACTTTCTGCTGCAGCAGGGCGACTTCATTACCGAGTTTATGGACGCGGTCGAGGAGGATCTGCGCAAGAGCGTGGACACGCTGCACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGCTGGGGCTGTCGTCCGCCAAGTACGACGAGTATCACGACGATCTGAAAACGATGCTTCTACCGTACGGCATCGTGACGCAGATCTCGAAAATCGTCAACAACGAGGACGCGTTCGTGGACACGCTGAGCGACACGTCCCAGC]

[+] EMBL BM614901             [CCGCCCACGCGTCCGGGGAGAAGCAGTACACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACACGCGGACATCATACTGCGCACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGGCGGGGCTGAGTTTCAACCGGGCAATGCGAACGGCGGCGGCGGCTTCGGCGCCACCACGACGACCGATCTGCTCAACGCGTCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCACACTTCGACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTGAATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGCTGTCCGTCAAGCGCTACTTTCTGCTGCAGCAGGGCGACTTCATTACCGAGTTTATGGACGCGGTCGAGGAGGATCTGCGCAAGAGCGTGGACACGCTGCACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGCTGGGGCTGTCGTCCGCCAAGTACGACGAGTATCACGACGATCTGAAAACGATGCTTCTACCGTACGGCATCGTGACGCAGATCTCGAAAATCGTCAACAACGAGGACGCGTTCGTGGACACGCTGAGCGACACGTCCCAGC]




>consensus_4732#2
CCGCCCACGCGTCCGGGGAGAAGCAGTACACCATCCGGAACGAGAAGGTGCCGTGCTTTT
TGGCCAAACACGCGGACATCATACTGCGCACCGGCAAGTACCTGAACGTGGTGCGCGTGT
GCGGCGGGGCTGAGTTTCAACCGGGCAATGCGAACGGCGGCGGCGGCTTCGGCGCCACCA
CGACGACCGATCTGCTCAACGCGTCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAAC
GGCTGCAGTACGCACACTTCGACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATT
TCGCCTCCTCCTCGCTGCTGAATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGC
TGTCCGTCAAGCGCTACTTTCTGCTGCAGCAGGGCGACTTCATTACCGAGTTTATGGACG
CGGTCGAGGAGGATCTGCGCAAGAGCGTGGACACGCTGCACCCGATCCGGCTGGCCAACC
TGCTGGACGTGACGCTGGGGCTGTCGTCCGCCAAGTACGACGAGTATCACGACGATCTGA
AAACGATGCTTCTACCGTACGGCATCGTGACGCAGATCTCGAAAATCGTCAACAACGAGG
ACGCGTTCGTGGACACGCTGAGCGACACGTCCCAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4732#1      CCGCGGACGCGTGGGCGGACGCGTGGGCTGGTCGAGTCGGCTGCGGCGCCGTTCATGGAG 60
consensus_4732#2      ------------------------------------------------------------
consensus_4732#0      ---------------------------------TTCGTGGACACGCTGAGCGACACGTCT 27
                                                                                  

consensus_4732#1      ATGCTGGAGCTGTGGATCTACCGGGGCGTCATTAACGATCCGCAGCAGGAGTTTTTCATC 120
consensus_4732#2      ------------------------------------------------------------
consensus_4732#0      CAGCTGAAGGGTGTCGAGTGCTTTACCTTCACCTACAAGGCGCAGTGGCCGGTGTCGATC 87
                                                                                  

consensus_4732#1      GACCACAGCTCGATGGAGCTGACCGAGAACGAGCTGGTCGACTACTGGGAGAAGCAGTAC 180
consensus_4732#2      -----------------------------CCGCCCACGCGTCCG--GGGAGAAGCAGTAC 29
consensus_4732#0      GTGCTGAACCTGTGGACCATCTCGAAGTACCAGATGATCTTCCG------GCAGC--TCT 139
                                                   *        *  *        * ***  *  

consensus_4732#1      ACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACATGCGGACATCATACTGCGC 240
consensus_4732#2      ACCATCCGGAACGAGAAGGTGCCGTGCTTTTTGGCCAAACACGCGGACATCATACTGCGC 89
consensus_4732#0      TCTACCTGAAGTACGTCGAGCGCATCCTTTGCCGGGTGTGGATCGCCAACAACGAGACGC 199
                       * * * * *    *  *    * * ****   *         **   *  *     ***

consensus_4732#1      ACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGG--CGGGGCCGAGTTTCAACCGGGCA 298
consensus_4732#2      ACCGGCAAGTACCTGAACGTGGTGCGCGTGTGCGG--CGGGGCTGAGTTTCAACCGGGCA 147
consensus_4732#0      GCCAGTTTGCGCC-GAACCCGGCCAAGCTGTACCGGTCCGCGTTTACCCTGCGCCAGAAG 258
                       ** *   *  ** ****  **      *** * *  * * *   *   *   ** *   

consensus_4732#1      ATGC-GAACGGCGGCGGCGGC------GGCGCAACGACGACTGATCTGCTCAACGCG--- 348
consensus_4732#2      ATGC-GAACGGCGGCGGCGGCTTCGGCGCCACCACGACGACCGATCTGCTCAACGCG--- 203
consensus_4732#0      ATGCTGATCGCCATCCAGAGCTTCGAGTCGTACATGATGATCGAGGTGATCGAACCGAAC 318
                      **** ** ** *  *    **            * ** **  **  ** ** *  **   

consensus_4732#1      TCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCAC---ACTTC 405
consensus_4732#2      TCGAGCGCGACGGCCCGGACCACGACCGCGGTCAAACGGCTGCAGTACGCAC---ACTTC 260
consensus_4732#0      TGGCACATTTTTTACCAAAACATGAAACAGGTCAAAAACATTGATGATGTGTTGAACTAT 378
                      * *  *        **  * ** **    *******    *  *  * *      ***  

consensus_4732#1      GACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTG 465
consensus_4732#2      GACCAGTCGTACCTGGACGAGATTGAGGAGGCGTACAATTTCGCCTCCTCCTCGCTGCTG 320
consensus_4732#0      CATCAGGACTTTCTGGATCAATGTTTGAAGAATTGCATGCTTACCGAGCCCGATTTGCTT 438
                       * ***   *  *****  *   *  * **   * **   *  **    **    **** 

consensus_4732#1      AATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGCTGT--CCGTCAAGCGCTACT 523
consensus_4732#2      AATCTCATCATGAACAAGTACGATCTGATGGGCCGGCTGCTGT--CCGTCAAGCGCTACT 378
consensus_4732#0      AAACCGATCATCAATCTATGCAATAT-ATGCATCAAATTTTGTGACTTTCTAGCGACCGC 497
                      ** *  ***** **    * * ** * ***   *   *  ***  *  ** ****     

consensus_4732#1      TTCTGCTGCAGCAG-GGCGACTTCATTACCG-AGTTTATGGACGCGGTCGAGGAGGATCT 581
consensus_4732#2      TTCTGCTGCAGCAG-GGCGACTTCATTACCG-AGTTTATGGACGCGGTCGAGGAGGATCT 436
consensus_4732#0      AACTACCATGGCACCGACGGAAACGTTCTCGGAGCGGGTGGAACAATTTCGCCACGATTT 557
                        ** *    ***  * **    * **  ** **    ****     *     * *** *

consensus_4732#1      GCGCAAGAGCGTGGACACGCTGC-ACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGC 640
consensus_4732#2      GCGCAAGAGCGTGGACACGCTGC-ACCCGATCCGGCTGGCCAACCTGCTGGACGTGACGC 495
consensus_4732#0      TACCGACCAGCTCATGACGCTGCTGCGCAAGATTGCCGACGTTGCGACGTTAAGCACCTC 617
                         * *     *    *******  * * *    ** * *    *  *   * *   * *

consensus_4732#1      TGGGGCTG---------------------------------------------------- 648
consensus_4732#2      TGGGGCTGTCGTCCGCCAAGTACGACGAGTATCACGACGATCTGAAAACGATGCTTCTAC 555
consensus_4732#0      AGAACGTTTTATCAACCTCATTTACCGAATCAACTTCAACTCGTACTACAGTGAGACGAA 677
                       *    *                                                     

consensus_4732#1      ------------------------------------------------------------
consensus_4732#2      CGTACGGCATCGTGACGCAGATCTCGAAAATCGTCAACAACGAGGACGCGTTCGTGGACA 615
consensus_4732#0      CGAAAACTAGAG-GAAAGGTAACCCACCATCTGTGAGCAAAAAGGAAGGAGGAAAAAAAA 736
                                                                                  

consensus_4732#1      -------------------------------------------
consensus_4732#2      CGCTGAGCGACACGTCCCAGC---------------------- 636
consensus_4732#0      GTACAACTCTTAAAAAAAAGCATCCCCGCTTGCCAAACTCTGT 779