These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4771#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 777 fasta sequence [ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAGTGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGGAGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAGTGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAGTCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAATAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC] [+] EMBL BX629267 [ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAGTGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGGAGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAGTGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAGTCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAATAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC] [+] EMBL BX629160 [ GCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAGTGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGGAGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAGTGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAGTCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAATAACCCGTACTCGCCCGATGTGCTCCAGCGT ] consensusID : consensus_4771#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 722 fasta sequence [CCGCGGACGCGTGGGGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTTGCACAGAACGGAGCTAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCGACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAAACAGGGGACAATCGTTCCGCCGCCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGAAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCTTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGTAATGCCAAACCGATCGCCAACAACCCGTACTCGCCCGATGTGCTCCAGCGTCGGCTGTCGGAAAAGACACGCCCGTCCAGCATGATCGAGATTGATCGGTTGGTGCGAAAGGAGGCGGCCCCAGCCACCGGAGGAGCCGCCGGCGGTGTGCTGATCGACGATGAGGAACCACCCAAAGAGCCGACGGATTCGGGGACGGAGAACGATCGCTCGTTACAGTCGGTGACGGGTGGCGTACTGACAGAAACGAAGAAGATCGGTCGCGAGTACTACATCAACGATCCAGAGCGTC] [+] EMBL BM588509 [CCGCGGACGCGTGGGGTCGGAAGCTACCAACAGTCAGCTGCTGGCCGATCAGGTTGCACAGAACGGAGCTAGTGAACGTCTGCAGGTGGACGATCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCGACCCTGACCAACCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGATGCTGCAGCGTACCGAAACAGGGGACAATCGTTCCGCCGCCGAATCCAACGGTTACGGTGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGAAGGCGATGTACCGGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCTTGGATGCACCGGACACGCTCATACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGTAATGCCAAACCGATCGCCAACAACCCGTACTCGCCCGATGTGCTCCAGCGTCGGCTGTCGGAAAAGACACGCCCGTCCAGCATGATCGAGATTGATCGGTTGGTGCGAAAGGAGGCGGCCCCAGCCACCGGAGGAGCCGCCGGCGGTGTGCTGATCGACGATGAGGAACCACCCAAAGAGCCGACGGATTCGGGGACGGAGAACGATCGCTCGTTACAGTCGGTGACGGGTGGCGTACTGACAGAAACGAAGAAGATCGGTCGCGAGTACTACATCAACGATCCAGAGCGTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4771#0 ACCGTCGCCCACGGAAGAGGTGAAGGCACTGATCGGGGACAAGAATGCGGACGAGATTAG 60 consensus_4771#1 ------------------------------------------------------------ consensus_4771#0 TGATCTGTCTGAGGCAGGATCGGACTGTGAAGGGTACGAGTCGGATGGGAATGTGAACGG 120 consensus_4771#1 ------------------------------------------------------------ consensus_4771#0 AGGCACTGTACCATCGGTAGCGCCTGTGGTTGTGGCATCAAGCAGCAAAGACACAACGAG 180 consensus_4771#1 ------------------------------------------------------------ consensus_4771#0 TGAGGGAATTTCGTCCTCCTCCAAGACACAATCACTGGACGAGATCCTGCCGCCCGACAG 240 consensus_4771#1 ------------------------------------------------------------ consensus_4771#0 TCTCGTGTCGATCAACTCGTTGCCGGTCAATGAGGAGGCACTGTCGGAAGCTACCAACAG 300 consensus_4771#1 ---------------------------CCGCGGACGCGTGGGGTCGGAAGCTACCAACAG 33 * * * ****************** consensus_4771#0 TCAGCTGCTGGCCGATCAGGTCGCACAGAACGGAGCCAGTGAACGTCTGCAGGTGGACGA 360 consensus_4771#1 TCAGCTGCTGGCCGATCAGGTTGCACAGAACGGAGCTAGTGAACGTCTGCAGGTGGACGA 93 ********************* ************** *********************** consensus_4771#0 TCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCAACCCTGACCAA 420 consensus_4771#1 TCTGATCAGTATCGAACCGGTGGCGGACAGGGTGGAAACGACCAATCCGACCCTGACCAA 153 ************************************************ *********** consensus_4771#0 CCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGAT 480 consensus_4771#1 CCCGTTCCTGGACGATGTGTTTGAGGCAAACAACAATGTTATAACGGACGACGTGAAGAT 213 ************************************************************ consensus_4771#0 GCTGCAGCGTACCGAGACAGGGGACAATCGCAGTTCCGCCACCGAATCCAACGGTTACGG 540 consensus_4771#1 GCTGCAGCGTACCGAAACAGGGGACAATC---GTTCCGCCGCCGAATCCAACGGTTACGG 270 *************** ************* ******** ******************* consensus_4771#0 TGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGGAGGCGATGTACC 600 consensus_4771#1 TGACCGAAAAGAAATCCCAATAGATCGAGCACAAATAGCAACCAATGAAGGCGATGTACC 330 *********************************************** ************ consensus_4771#0 GGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCGTGGATGCACCGGACACGCTCAT 660 consensus_4771#1 GGAGGTACAGGGTGATTCTGGAGAGCAGGACGCGTCCTTGGATGCACCGGACACGCTCAT 390 ************************************* ********************** consensus_4771#0 ACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGCAATGCCAAACCGATCGCCAA 720 consensus_4771#1 ACCAGGATCCATTGCCGAACGGGAGCATCTGAAGTGGCGTAATGCCAAACCGATCGCCAA 450 *************************************** ******************** consensus_4771#0 TAACCCGTACTCGCCCGATGTGCTCCAGCGTCNGCTGTCGGAAAAGACACGCCCGTC--- 777 consensus_4771#1 CAACCCGTACTCGCCCGATGTGCTCCAGCGTCGGCTGTCGGAAAAGACACGCCCGTCCAG 510 ******************************* ************************ consensus_4771#0 ------------------------------------------------------------ consensus_4771#1 CATGATCGAGATTGATCGGTTGGTGCGAAAGGAGGCGGCCCCAGCCACCGGAGGAGCCGC 570 consensus_4771#0 ------------------------------------------------------------ consensus_4771#1 CGGCGGTGTGCTGATCGACGATGAGGAACCACCCAAAGAGCCGACGGATTCGGGGACGGA 630 consensus_4771#0 ------------------------------------------------------------ consensus_4771#1 GAACGATCGCTCGTTACAGTCGGTGACGGGTGGCGTACTGACAGAAACGAAGAAGATCGG 690 consensus_4771#0 -------------------------------- consensus_4771#1 TCGCGAGTACTACATCAACGATCCAGAGCGTC 722 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||