Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 4792 cluster # 4792       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4792#0 length = 1640 sequences # 3  

consensusID : consensus_4792#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1640
fasta sequence
                              [ATTAACGCGGTGCTGGCCGCGTTCATCTTCGCAGTGTCGATCGTGTATCTGTTCATACGCAATAAGCATAACTATTGGAAGGACAATGGATTTCCGTACGCTCCGAATCCACACTTTTTGTTCGGGCATGCGAAGGGCCAGGCCCAGACGCGGCACGGCGCCGACATCCATCAGGAGCTGTACCGATACTTCAAGCAGCGGGGCGAACGGTACGGCGGCATTAGCCAGTTTATCGTGCCCTCGGTGCTGGTGATCGACCCGGAGCTGGCGAAGACGATCCTGGTGAAGGATTTTAACGTGTTTCACGATCACGGCGTGTTTACCAATGCAAAGGACGACCCGCTCACGGGACATCTGTTCGCACTGGAGGGCCAACCGTGGCGGTTGATGCGCCAGAAGCTTACGCCGACGTTCACCTCGGGCCGAATGAAGCAAATGTTCGGCACAATACGGGATGTGGGGCTTGAGCTGGAAAAGTGTATGGAGCAAAGCTACAACCAACCGGAGGTGGAGATGAAGGATATCCTGGGCCGTTTTACGACGGACGTGATTGGGACGTGCGCGTTCGGCATCGAGTGCAATACACTTAAGACGACAGACTCGGAGTTCCGCAAGTACGGCAACAAGGCGTTCGAGTTGAATACGATGATCATGATGAAGACTTTCCTCGCGTCGTCCTACCCGACGCTGGTGCGCAATCTGCACATGAAGATCACGTACAACGATGTGGAGCGATTCTTTCTGGACATCGTGAAGGAAACGGTCGACTACCGGGAGGCGAACAACGTAAAACGGAACGACTTCATGAACCTGATGCTGCAGATCAAGAACAAGGGCAAGCTGGACGATAGTGATGACGTGACGAGTGTGGGCAAGGGAGAGGTCGGCATGACACAGAACGAGCTAGCGGCCCAGGCGTTTGTGTTTTTCCTGGCGGGTTTTGAGACGTCGTCCACCACACAAAGCTTCTGTCTGTACGAGCTGGCAAAAAACCCGGATATCCAGGAGCGGCTGAGAGAGGAAATTAATCGAGCTATTGCGGAGAACGGTGGACAGGTGACGTACGATGTGGTCATGAACATAAAGTATTTGGACAATGTGATTGACGAAACCCTTCGGAAGTACCCACCGGTGGAATCGTTAACCCGTGTACCGTCTGTGGACTATCTTATCCCCGGCACGAAGCATGTGATCCCCAAGCGAACACTGGTGCAAATTCCAGCCTACGCTATTCAGCGCGATCCGGACCACTATCCCGACCCGGAACGATTCAATCCGGATCGATTCCTACCAGAGGAAGTGAAAAAACGACACCCGTTCACGTTCATCCCATTCGGCGAGGGACCACGCATCTGCATTGGGCTGCGGTTTGGCTTGATGCAAACCAAGGTGGGATTGATTACGCTGCTGAGAAAGTTCCGCTTCTCGCCGTCCGCGCGTACGCCCGAACGGGTAGAATACGATCCGAAAATGATAACCATAGCGCCGAAAGCGGGCAACTACTTGAAGGTGGAAAAGTTGTAGTCGGCTATCAGTACAAACGTTTCGTTCGTTGGGTGCTGAAGCTCTCCCGGGGGTTTATAATTTTGTGTTGCAATAAAAGCAAAACAAAGCATCGCTAACATAGAGGCACAAAGAAA]

[+] EMBL AF487534             [ATTAACGCGGTGCTGGCCGCGTTCATCTTCGCAGTGTCGATCGTGTATCTGTTCATACGCAATAAGCATAACTATTGGAAGGACAATGGATTTCCGTACGCTCCGAATCCACACTTTTTGTTCGGGCATGCGAAGGGCCAGGCCCAGACGCGGCACGGCGCCGACATCCATCAGGAGCTGTACCGATACTTCAAGCAGCGGGGCGAACGGTACGGCGGCATTAGCCAGTTTATCGTGCCCTCGGTGCTGGTGATCGACCCGGAGCTGGCGAAGACGATCCTGGTGAAGGATTTTAACGTGTTTCACGATCACGGCGTGTTTACCAATGCAAAGGACGACCCGCTCACGGGACATCTGTTCGCACTGGAGGGCCAACCGTGGCGGTTGATGCGCCAGAAGCTTACGCCGACGTTCACCTCGGGCCGAATGAAGCAAATGTTCGGCACAATACGGGATGTGGGGCTTGAGCTGGAAAAGTGTATGGAGCAAAGCTACAACCAACCGGAGGTGGAGATGAAGGATATCCTGGGCCGTTTTACGACGGACGTGATTGGGACGTGCGCGTTCGGCATCGAGTGCAATACACTTAAGACGACAGACTCGGAGTTCCGCAAGTACGGCAACAAGGCGTTCGAGTTGAATACGATGATCATGATGAAGACTTTCCTCGCGTCGTCCTACCCGACGCTGGTGCGCAATCTGCACATGAAGATCACGTACAACGATGTGGAGCGATTCTTCCTGGACATCGTGAAGGAAACGGTCGACTACCGGGAGGCGAACAACGTGAAGCGGAACGACTTCATGAACCTGATGCTGCAGATCAAGAACAAGGGCAAGCTGGACGATAGTGATGACG G  TAGTTTGGGCAAGGGAGAGGTCGGCATGACACAGAACGAGCTAGCGGCCCAGGCGTTTGTGTTTTTCCTGGCGGGTTTTGAGACGTCGTCCACCACACAAAGCTTCTGTCTGTACGAGCTGGCAAAGAACCCGGACATCCAGGAGCGGCTGAGAGAGGAAATTAATCGAGCTATTGCGGAGAACGGTGGAGAGGTGACGTACGACGTGGTCATGAACATAAAGTATTTGGACAATGTGATTGACGAAACCCTTCGGAAGTACCCACCGGTGGAATCGTTAACCCGCGTACCGTCTGTGGACTATCTCATCCCCGGCACAAAGCATGTGATCCCGAAGCGAACACTGGTGCAAATTCCAGCCTACGCGATTCAGCGCGATCCGGACCACTATCCCGACCCGGAACGGTTCAATCCTGATCGATTCCTACCGGAGGAAGTGAAAAAACGACACCCGTTCACGTTCATCCCATTCGGCGAGGGACCACGCATCTGCATTGGGCTGCGGTTTGGCTTGATGCAAACCAAGGTGGGATTGATTACGCTGCTGAGAAAGTTCCGCTTCTCGCCGTCCGCGCGTACGCCCGAACGGGTAGAATACGATCCGAAAATGATAACCATAGCGCCGAAAGCGGGCAACTACTTGAAGGTGGA                                                                                                                              ]
[+] EMBL CNS08GZE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGTCGTCCTACCCGACGCTGGTGCGCAATCTGCACATGAAGATCACGTACAACGATGTGGAGCGATTCTTTCTGGACATCGTGAAGGAAACGGTCGACTACCGGGAGGCGAACAACGTAAAACGGAACGACTTCATGAACCTGATGCTGCAGATCAAGAACAAGGGCAAGCTGGACGATAGTGATGACGTGACGAGTGTGGGCAAGGGAGAGGTCGGCATGACACAGAACGAGCTAGCGGCCCAGGCGTTTGTGTTTTTCCTGGCGGGTTTTGAGACGTCGTCCACCACACAAAGCTTCTGTCTGTACGAGCTGGCAAAAAACCCGGATATCCAGGAGCGGCTGAGAGAGGAAATTAATCGAGCTATTGCGGAGAACGGTGGACAGGTGACGTACGATGTGGTCATGAACATAAAGTATTTGGACAATGTGATTGACGAAACCCTTCGGAAGTACCCACCGGTGGAATCGTTAACCCGTGTACCGTCTGTGGACTATCTTATCCCCGGCACGAAGCATGTTATCCCCAAGCGAACACTGGTGCAAATTCCAGCCTACGCTATTCAGCGCGATCCGGACCACTATCCCGACCCGGAACGATTCAATCCGGATCGATTCCTACCAGAGGAAGTGAAAAAACGACACCCGTTCACGTTCATCCCATTCGGCGAGGGACCACGCATCTGCATTGGGCTGCGGTTTGGCTTGATGCAAACCAAGGTGGGATTGATTACGCTGCTGAGAAAGTTCCGCTTCTCGCCGTCCGCGCGTACGCCCGAACGGGTAGAATACGATCCGAAAATGATAACCATAGCGCCGAAAGCGGGCAACTACTTGAAGGTGGAAAAGTTGTAGTCGGCTATCAGTACAAACGTTTCGTTCGTTGGGTGCTGAAGCTCTCCCGGGGGTTTATAATTTTGTGTTGCAATAAAAGCAAAACAAAGCATCGCTAACATAGAGGCACAAAGAAA]
[-] EMBL CNS08GZF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAATCTGCACATGAAGATAACGTACAACGATGTGGAGCGATTCTTTCTGGACATCGTGAAGGAAACGGTCGACTACCGGGAGGCGAACAACGTAAAACGGAACGACTTCATGAACCTGATGCTGCAGATCAAGAACAAGGGCAAGCTGGACGATAGTGATGACGTGACGAGTGTGGGCAAGGGAGAGGTCGGCATAACACAGAACGAGCTAGCGGCCCAGGCGTTTGTGTTTTTCCTGGCGGGTTTTGAGACGTCGTCCACCACACAAAGCTTCTGTCTGTACGGGCTGGCAAAAAACCCGGATATCCAGGAGCGGCTGAGAGAGGAAATTAATCGAGCTATTGCGGAGAACGGTGGACAGGTGACGTACGATGTGGTCATGAACATAAAGTATTTGGACAATGTGATTGACGAAA CCTTCGGAAGTACCCACCGGTGGAATCGTTAACCCGTGTACCGTCTGTGGACTATCTTATCCCCGGCACGAAGCATGTGATCCCCAAGCGAAAACTGGTGCAAATTCCAGCCTACGCTATTCAGCGCGATCCGGACCACTATCCCGACCCGGAACGATTCAATCCGGATCGATTCCTACCAGAGGAAGTGAAAAAACGACACCCGTTCACGTTCATCCCATTCGGCGAGGGACCACGCCTCTGCATTGGGCTGCGGTTTGGCTTGATGCAAACCAAGGTGGGATTGATTACGCTGCTGAGAAAGTTCCGCTTCTCGCCGTCCGCGCGTACGCCCGAACGGGTAGAATACGATCCGAAAATGATAACCATAGCGCCGAAAGCGGGCAACTACTTGAAGGTGGAAAAGTTGTAGTCGGCTATCAGTACAAACGTTTCGTTCGTTGGGTGCTGAAGCTCTCCC GGGGTTTATAATTTTGTGTTGCAATAAAAGCAAAACAA                             ]


>consensus_4792#0 ATTAACGCGGTGCTGGCCGCGTTCATCTTCGCAGTGTCGATCGTGTATCTGTTCATACGC AATAAGCATAACTATTGGAAGGACAATGGATTTCCGTACGCTCCGAATCCACACTTTTTG TTCGGGCATGCGAAGGGCCAGGCCCAGACGCGGCACGGCGCCGACATCCATCAGGAGCTG TACCGATACTTCAAGCAGCGGGGCGAACGGTACGGCGGCATTAGCCAGTTTATCGTGCCC TCGGTGCTGGTGATCGACCCGGAGCTGGCGAAGACGATCCTGGTGAAGGATTTTAACGTG TTTCACGATCACGGCGTGTTTACCAATGCAAAGGACGACCCGCTCACGGGACATCTGTTC GCACTGGAGGGCCAACCGTGGCGGTTGATGCGCCAGAAGCTTACGCCGACGTTCACCTCG GGCCGAATGAAGCAAATGTTCGGCACAATACGGGATGTGGGGCTTGAGCTGGAAAAGTGT ATGGAGCAAAGCTACAACCAACCGGAGGTGGAGATGAAGGATATCCTGGGCCGTTTTACG ACGGACGTGATTGGGACGTGCGCGTTCGGCATCGAGTGCAATACACTTAAGACGACAGAC TCGGAGTTCCGCAAGTACGGCAACAAGGCGTTCGAGTTGAATACGATGATCATGATGAAG ACTTTCCTCGCGTCGTCCTACCCGACGCTGGTGCGCAATCTGCACATGAAGATCACGTAC AACGATGTGGAGCGATTCTTTCTGGACATCGTGAAGGAAACGGTCGACTACCGGGAGGCG AACAACGTAAAACGGAACGACTTCATGAACCTGATGCTGCAGATCAAGAACAAGGGCAAG CTGGACGATAGTGATGACGTGACGAGTGTGGGCAAGGGAGAGGTCGGCATGACACAGAAC GAGCTAGCGGCCCAGGCGTTTGTGTTTTTCCTGGCGGGTTTTGAGACGTCGTCCACCACA CAAAGCTTCTGTCTGTACGAGCTGGCAAAAAACCCGGATATCCAGGAGCGGCTGAGAGAG GAAATTAATCGAGCTATTGCGGAGAACGGTGGACAGGTGACGTACGATGTGGTCATGAAC ATAAAGTATTTGGACAATGTGATTGACGAAACCCTTCGGAAGTACCCACCGGTGGAATCG TTAACCCGTGTACCGTCTGTGGACTATCTTATCCCCGGCACGAAGCATGTGATCCCCAAG CGAACACTGGTGCAAATTCCAGCCTACGCTATTCAGCGCGATCCGGACCACTATCCCGAC CCGGAACGATTCAATCCGGATCGATTCCTACCAGAGGAAGTGAAAAAACGACACCCGTTC ACGTTCATCCCATTCGGCGAGGGACCACGCATCTGCATTGGGCTGCGGTTTGGCTTGATG CAAACCAAGGTGGGATTGATTACGCTGCTGAGAAAGTTCCGCTTCTCGCCGTCCGCGCGT ACGCCCGAACGGGTAGAATACGATCCGAAAATGATAACCATAGCGCCGAAAGCGGGCAAC TACTTGAAGGTGGAAAAGTTGTAGTCGGCTATCAGTACAAACGTTTCGTTCGTTGGGTGC TGAAGCTCTCCCGGGGGTTTATAATTTTGTGTTGCAATAAAAGCAAAACAAAGCATCGCT AACATAGAGGCACAAAGAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)