These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 901 fasta sequence [AATGGCGGATAGTTTCTTCAAAGCGGTGATTCGTGATCCCAAGTGGGACGTGCGGTCGGAAGCGAAACGCTTGGGCTTTCTGTTTCAATTGTATATCGATTCGAAAAAGCCGACGGAAGTGTTTATCAAGTACAAAACCGCCAAAGAGGCGGCGAAGGCACGGGCAAGCTTAGCGCAAAATGAGAATGTGTTGCGCGTTGAATCGATGGACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCTGCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAACTCTGCTGCATCGAACCACATGCTACCGCCGATGCCGATGCAGATGCCAATGCAGATGCCAATGCAGATGCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCTGCGTGCCGGAACAGTGGCGCCTCGTTCCAGTGCTTTGTTTGTGGCATATTCTACTGCGGCGACCAATGCCAAAGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGCAACGAATCCGTTTGTGGCGGCCAATGTACCACAAAGGAGCATGCCCTTAGCCTTCAACGGAATGTTCCCCGGGGCGGGCAACAACAATTGGTACGAGAATAAAGAAAATGCACAACATTACGCGCCGCCGCACCCGAATGGCCCAGTGGCGGGTAGCTCCAAACAACAGGCTGGTACATCGAAACAACCGGCCCAGCAGCCGAAACCCGTCCCGACTGCCACCCCGAAGGAATCGCCACCCTGTAATGTACCCACCAACGTGCTCAAAAGTATGGGCATGAAACGTCACCAGGACCAGGCCGACCAATCGAACAGTGTGGTGAGTGGTGTATCGAGCGCC] [+] EMBL CNS09R1I [AATGGCGGATAGTTTCTTCAAAGCGGTGATTCGTGATCCCAAGTGGGACGTGCGGTCGGAAGCGAAACGCTTGGGCTTTCTGTTTCAATTGTATATCGATTCGAAAAAGCCGACGGAAGTGTTTATCAAGTACAAAACCGCCAAAGAGGCGGCGAAGGCACGGGCAAGCTTAGCGCAAAATGAGAATGTGTTGCGCGTTGAATCGATGGACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCTGCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAACTCTGCTGCATCGAACCACATGCTACCGCCGATGCCGATGCAGATGCCAATGCAGATGCCAATGCAGATGCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCTGCGTGCCGGAACAGTGGCGCCTCGTTCCAGTGCTTTGTTTGTGGCATATTCTACTGCGGCGACCAATGCCAAAGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGCAACGAATCCGTTTGTGGCGGCCAATGTACCACAAAGGAGCATGCCCTTAGCCTTCAACGGAATGTTCCCCGGGGCGGGCAACAACAATTGGTACGAGAATAAAGAAAATGCACAACATTACGCGCCGCCGCACCCGAATGGCCCAGTGGCGGGTAGCTCCAAACAACAGGCTGGTACAT ] [+] EMBL BM590553 [ ccgAAAATGAGAATGTGTTGCGCGTTGAATCGATGGACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCTGCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAACTCTGCTGCATCGAACCACATGCCACCGCCGATGCCGATGCAGATGCCAATGCAGATGCCAATGCAGATGCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCCGCGTGCCGGAACAGTGGCGCCTCGTTCCAGTGCTTTGTTTGTGGCATATTCTACTGCGGCGACCAATGCCAAAGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGCAACGAATCCGTTTGTGGCGGCCAATGTACCACAAAGGAGCATGCCCTTACCCTTCAACGGAATGTTCCCCGGGGCGGGCAACAACAACTGGTACGAAAATAAAGAAAATGCACAACATTACGCGCCGCCGCACTCGAATGGCCCAGTGGCAGGCAGCTCCAAACAACAGCCTGGTACATCGAAACAACCGGCCCAGCAGCCGAAACCCGTCCCGACTGCCACCCCGAAGGAATCGCCACCCTGTAATGTACCCACCAACGTGCTCAAAAGTATGGGCATGAAACGTCACCAGGACCAGGCCGACCAATCGAACAGTGTGGTGAGTGGTGTATCGAGCGCC] consensusID : consensus_4803#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 641 fasta sequence [CCGGGAAGCTGCGGAATAGCAACGCCGGCCCAATACAGCTGAGTTTTGTGTTTTATTGTTTAACAGCTCCGTTTAACCTTGAGCAGCCAGATAATGGCGGATAGTTTCTTCAAAGCGGTGATTCGTGATCCCAAGTGGGACGTGCGGTCGGAAGCCAAACGCTTGGGCTTTCTGTTTCAATTGTACATCGATTCGAAAAAGCCGACGGAAGTGTTTATCAAGTACAAAACCGCCAAGGAGGCGGCGAAGGCACGGGCAAGCTTAGCGCAAAATGAGAATGTGTTGCGCGTTGAATCGATGGACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCTGCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAATTCTGCTGCATCGAACCACATGCCACCGCCGATGCCGATGCAGATGCCAATGCAGATGCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCCGCGTGCCGGAACAGTGGCGCCTCGTTCCAGTGCTTTGTATGTGGCATATTCTACTGCGGCGACCAATGCCAAAGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGC] [+] EMBL BM633848 [CCGGGAAGCTGCGGAATAGCAACGCCGGCCCAATACAGCTGAGTTTTGTGTTTTATTGTTTAACAGCTCCGTTTAACCTTGAGCAGCCAGATAATGGCGGATAGTTTCTTCAAAGCGGTGATTCGTGATCCCAAGTGGGACGTGCGGTCGGAAGCCAAACGCTTGGGCTTTCTGTTTCAATTGTACATCGATTCGAAAAAGCCGACGGAAGTGTTTATCAAGTACAAAACCGCCAAGGAGGCGGCGAAGGCACGGGCAAGCTTAGCGCAAAATGAGAATGTGTTGCGCGTTGAATCGATGGACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCTGCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAATTCTGCTGCATCGAACCACATGCCACCGCCGATGCCGATGCAGATGCCAATGCAGATGCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCCGCGTGCCGGAACAGTGGCGCCTCGTTCCAGTGCTTTGTATGTGGCATATTCTACTGCGGCGACCAATGCCAAAGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_4803#0 ------------------------------------------------------------ consensus_4803#1 CCGGGAAGCTGCGGAATAGCAACGCCGGCCCAATACAGCTGAGTTTTGTGTTTTATTGTT 60 consensus_4803#0 --------------------------------AATGGCGGATAGTTTCTTCAAAGCGGTG 28 consensus_4803#1 TAACAGCTCCGTTTAACCTTGAGCAGCCAGATAATGGCGGATAGTTTCTTCAAAGCGGTG 120 **************************** consensus_4803#0 ATTCGTGATCCCAAGTGGGACGTGCGGTCGGAAGCGAAACGCTTGGGCTTTCTGTTTCAA 88 consensus_4803#1 ATTCGTGATCCCAAGTGGGACGTGCGGTCGGAAGCCAAACGCTTGGGCTTTCTGTTTCAA 180 *********************************** ************************ consensus_4803#0 TTGTATATCGATTCGAAAAAGCCGACGGAAGTGTTTATCAAGTACAAAACCGCCAAAGAG 148 consensus_4803#1 TTGTACATCGATTCGAAAAAGCCGACGGAAGTGTTTATCAAGTACAAAACCGCCAAGGAG 240 ***** ************************************************** *** consensus_4803#0 GCGGCGAAGGCACGGGCAAGCTTAGCGCAAAATGAGAATGTGTTGCGCGTTGAATCGATG 208 consensus_4803#1 GCGGCGAAGGCACGGGCAAGCTTAGCGCAAAATGAGAATGTGTTGCGCGTTGAATCGATG 300 ************************************************************ consensus_4803#0 GACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCT 268 consensus_4803#1 GACGAGTGGAATATAAAACCGAAAAAGCAGGAAAGCAAGCAACCGGAACATAATGCGTCT 360 ************************************************************ consensus_4803#0 GCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAACTCT 328 consensus_4803#1 GCCGCACCGTCGGTCGTGGGAAGCACTGTCCAAACTAGATCCCCGGCCAAGCATAATTCT 420 ******************************************************** *** consensus_4803#0 GCTGCATCGAACCACATGCTACCGCCGATGCCGATGCAGATGCCAATGCAGATGCCAATG 388 consensus_4803#1 GCTGCATCGAACCACATGCCACCGCCGATGCCGATGCAGATGCCAATGCAGAT------- 473 ******************* ********************************* consensus_4803#0 CAGATGCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCTGCGTGCCGGAAC 448 consensus_4803#1 -----GCAGATGCCGATGGGCCCGCCGGGAATGTTTAGCGTTTGTGCCGCGTGCCGGAAC 528 ****************************************** ************ consensus_4803#0 AGTGGCGCCTCGTTCCAGTGCTTTGTTTGTGGCATATTCTACTGCGGCGACCAATGCCAA 508 consensus_4803#1 AGTGGCGCCTCGTTCCAGTGCTTTGTATGTGGCATATTCTACTGCGGCGACCAATGCCAA 588 ************************** ********************************* consensus_4803#0 AGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGCAACGAAT 568 consensus_4803#1 AGAGCCGATTGGCCGGCCCATATCATGCAATGTGTACCACGCTTGGTGCGAGC------- 641 ***************************************************** consensus_4803#0 CCGTTTGTGGCGGCCAATGTACCACAAAGGAGCATGCCCTTAGCCTTCAACGGAATGTTC 628 consensus_4803#1 ------------------------------------------------------------ consensus_4803#0 CCCGGGGCGGGCAACAACAATTGGTACGAGAATAAAGAAAATGCACAACATTACGCGCCG 688 consensus_4803#1 ------------------------------------------------------------ consensus_4803#0 CCGCACCCGAATGGCCCAGTGGCGGGTAGCTCCAAACAACAGGCTGGTACATCGAAACAA 748 consensus_4803#1 ------------------------------------------------------------ consensus_4803#0 CCGGCCCAGCAGCCGAAACCCGTCCCGACTGCCACCCCGAAGGAATCGCCACCCTGTAAT 808 consensus_4803#1 ------------------------------------------------------------ consensus_4803#0 GTACCCACCAACGTGCTCAAAAGTATGGGCATGAAACGTCACCAGGACCAGGCCGACCAA 868 consensus_4803#1 ------------------------------------------------------------ consensus_4803#0 TCGAACAGTGTGGTGAGTGGTGTATCGAGCGCC 901 consensus_4803#1 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||