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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4818#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 819 fasta sequence
[CCGCACGAATTTGAACCATGACGTACGCGGAGCAGTCGAGCAAAGCCGGAGACGGCCAGAAATATGCTGCGGTCTCGAGCGTCCGTCGGTCGGTGTGCGTTGTCTGTTCCATTTTCGCTCTCGTGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCAACGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTCACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGCGTGTTCGGCTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGCCGGCCATTCATCCCCTGACGGCGGTGTGGATTCCACCGATGGACCGGTCCAAGTTCATCGCCAACATGATGGCTTCGTCGC]
[+] EMBL BM592324 [CCGCACGAATTTGAACCATGACGTACGCGGAGCAGTCGAGCAAAGCCGGAGACGGCCAGAAATATGCTGCGGTCTCGAGCGTCCGTCGGTCGGTGTGCGTTGTCTGTTCCATTTTCGCTCTCGTGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCAACGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTCACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGCGTGTTCGGCTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGT ]
[+] EMBL BM605313 [ ccgGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCACCGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAACTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGCGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGCCGGCCATTCATCCCCTGACGGCGGTGTGGATTCCACCGATGGACCGGTCCAAGTTCATCGCCAACATGATGGCTTCGTCGC]
consensusID : consensus_4818#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAGCTCCGGTGTCTCAGTGGCCTGCGAACTCTTGCCCACCGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGTGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGGCGGGCATTCATCCGCTGACGGCGGTGTGGATTCCACCGATG]
[+] EMBL BM609376 [CCGCCCACGCGTCCGCCCACGCGTCCGGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTACTCCGTCACCTCAAGCTCCGGTGTCTCAGTGGCCTGCGAACTCTTGCCCACCGCCGCACGCGCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAACATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGCGCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCGGTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCGTGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCAGCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCGGTGGACGGCGTGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGCCGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCTTCCTGGGCGCCTCCTGGGCGGGCATTCATCCGCTGACGGCGGTGTGGATTCCACCGATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4818#0 CCGCACGAATTTGAACCATGACGTACGCGGAGCAGTCGAGCAAAGCCGGAGACGGCCAGA 60
consensus_4818#1 ------------------------------------------------------------
consensus_4818#0 AATATGCTGCGGTCTCGAGCGTCCGTCGGTCGGTGTGCGTTGTCTGTTCCATTTTCGCTC 120
consensus_4818#1 ------------------------------------CCGCCCACGCGTCCGCCCACGCGT 24
** * *** ***
consensus_4818#0 TCGTGCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTAC 180
consensus_4818#1 CCG-GCCGAACGGTTCGGCTTGGTGTGTGTCTCCGGTCCACTGTTTTGTTCCCCGTTTAC 83
** ********************************************************
consensus_4818#0 TCCGTCACCTCAAACTCCGGTGTCTCAGTGGCCTGTGAACTCTTGCCCAACGCCGCACGC 240
consensus_4818#1 TCCGTCACCTCAAGCTCCGGTGTCTCAGTGGCCTGCGAACTCTTGCCCACCGCCGCACGC 143
************* ********************* ************* **********
consensus_4818#0 GCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAA 300
consensus_4818#1 GCACGCACTCCTCAGTCCACCCCGGGTGAAAGATGTCGACCGGCATAGCAGGATGGATAA 203
************************************************************
consensus_4818#0 CATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGC 360
consensus_4818#1 CATGCCGGCAAGTGCTGAACATTATGGTGATCTTCGGCTTCATGCTGAACTATGCGCTGC 263
************************************************************
consensus_4818#0 GCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCG 420
consensus_4818#1 GCGTAAACTTTACGATCGCGATCGTGGCGATGACGAAAACGCTCGTCAGCACGGTGACCG 323
************************************************************
consensus_4818#0 GTGACGATAACAGCACGACCGACGCCCTCAACCTCACCGACACCACGACCGAAGCGTCCG 480
consensus_4818#1 GTGACGATAACAGCACGACCGACGCCCTCAACCTGACCGACACCACGACCGAAGCGTCCG 383
********************************** *************************
consensus_4818#0 TGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCA 540
consensus_4818#1 TGATCGATGAGGCGGACAAGTTCGAGTGGGACGCCCGCCAGCAGAACCTGATGCTTGGCA 443
************************************************************
consensus_4818#0 GCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCG 600
consensus_4818#1 GCTTCTTCTGGGGCTACGTGCTGACGGAGCTGCCCGGTGGTCGGCTGGCGGAAATCGTCG 503
************************************************************
consensus_4818#0 GTGGACGGCGCGTGTTCGGCTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGC 660
consensus_4818#1 GTGGACGGCGTGTGTTCGGGTACAGCATGCTGTTTTCCAGCCTGCTGACCCTGCTGACGC 563
********** ******** ****************************************
consensus_4818#0 CGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCT 720
consensus_4818#1 CGCTCGCCTCCAACACGCACTACATTGCGGTGGTGATTCTGCGTGCCGTGCTCGGGTTCT 623
************************************************************
consensus_4818#0 TCCTGGGCGCCTCCTGGCCGGCCATTCATCCCCTGACGGCGGTGTGGATTCCACCGATGG 780
consensus_4818#1 TCCTGGGCGCCTCCTGGGCGGGCATTCATCCGCTGACGGCGGTGTGGATTCCACCGATG- 682
***************** *** ********* ***************************
consensus_4818#0 ACCGGTCCAAGTTCATCGCCAACATGATGGCTTCGTCGC 819
consensus_4818#1 ---------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||