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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5098#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 737 fasta sequence
[TTTTANTCNATAATTACGACCTTTGTTTAGTTTTATTTTCTCACGATTGTTTGTCAATTCGCTTTGTCGATTCGCTTTGGGGTTTGTTCACTTTACAGCAGTTTTATATAAACGTGTACAAGTATAAATGTAAATAAAACAAAACATTCCATTAAAAACAGGAAACAATGTTAATGGGCCTGCTCGGCGAGCTGAAGAAGAGTAATGTGGGAAAGACATTGCCGCTTGCTTGCCCAGTCAACTATGTCTCTTGTCTTCTACGCACGGTTACACTTTCCGGTCCGGTTCCGTGTGCTTATTGGTGGTATTGATTGGTTCGAATGTGTGTTTTTTTATATTCCTGTGCTTGGTTCGGTTCGCTCTTTGTGCGTTTCCGGTGTTTCCTTTCGCTTTGTTGACTGTTATCGTAGCTTTTATTCTATGAATTGTTCTTANAACTTGTTGTTTGTTTTGACGAGTGTTTGAATTGAGCTTCATATTTCTTCTTTTTTTTTTCTTCCAA--TGCAATGGTGCATTGTTTCGTTCGCAACAGTTTAATAAATTTTAGTTGTTTTCCTGGNGGTTGTGCTTCTTTCAGCGCGCTTTTTGTATCTAAACGAAGCAAAATATAGAAACTAAACCCTGCAAGCTTCCACCAGCATACACTAACACTGACTGGTTTCTTCATCTTACCGCTTTTAACGTGTTTTGNGGGTCATGCTGCTGAAATGATGAATCTATACGTTTTGTTTCTAAAA]
[+] EMBL BX624413 [TTTTANTCNATAATTACGACCTTTGTTTAGTTTTATTTTCTCACGATTGTTTGTCAATTCGCTTTGTCGATTCGCTTTGGGGTTTGTTCACTTTACAGCAGTTTTATATAAACGTGTACAAGTATAAATGTAAATAAAACAAAACATTCCATTAAAAACAGGAAACAATGTTAATGGGCCTGCTCGGCGAGCTGAAGAAGAGTAATGTGGGAAAGACATTGCCGCTTGCTTGCCCAGTCAACTATGTCTCTTGTCTTCTACGCACGGTTACACTTTCCGGTCCGGTTCCGTGTGCTTATTGGTGGTATTGATTGGTTCGAATGTGTGTTTTTTTATATTCCTGTGCTTGGTTCGGTTCGCTCTTTGTGCGTTTCCGGTGTTTCCTTTCGCTTTGTTGACTGTTATCGTAGCTTTTATTCTATGAATTGTTCTTANAACTTGTTGTTTGTTTTGACGAGTGTTTGAATTGAGCTTCATATTTCTTCTTTTTTTTTTCTTCCAA TGCAATGG ]
[+] EMBL BX625176 [ ATTACGACCTTTGTTT CTTTTATTTTCTCACGATTGTTTGTCAATTCGCTTTGTCGATTCGCTTTGGGGTTTGTTCACTTTACAGCAGTTTTATATAAACGT TACAAGTATAAATGTAAATAAAACAAAACATTCCATTAAAAACAGGAAACAATGTTAATGGGCCTGCTCGGCGAGCTGAAGAAGAGTAATGTGGGAAAGACATTGCCGCTTGCTTGCCCAGTCAACTATGTCTCTTGTCTTCTACGCACGGTTACACTTTCCGGTCCGGTTCCGTGTGCTTATTGGTGGTATTGATTGGTTCGAATGTGTGTTTTTTTATATTCCTGTGCTTGGTTCGGTTCGCTCTTTGTGCGTTTCCGGTGTTTCCTTTCGCTTTGTTGACTGTTATCGTAGCTTTTATTCTATGAATTGTTCTTAGAACTTGTTGTTTGTTTTGACGAGTGTTTGAATTGAGCTTCATATTTCTTC TTTTTTTTTCTTCCCATGTGCCAT TGCATTGTTTCGTTCGCAACAGTTTAATAAATTTTAGTTGTTTTCCTGGNGGTTGTGCTTCTTTCAGCGCGCTTTTTGTATCTAAACGAAGCAAAATATAGAAACTAAACCCTGCAAGCTTCCACCAGCATACACTAACACTGACTGGTTTCTTCATCTTACCGCTTTTAACGTGTTTTGNGGGTCATGCTGCTGAAATGATGAATCTATACGTTTTGTTTCTAAAA]
consensusID : consensus_5098#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 616 fasta sequence
[GATCCCCCCGCAGGTTAAAAGGAAAAAGAAGGAGAAGNCAAAAACAACTACAGAAGGAAAACGGATACATTTAATCAGCAACCATCCCGAGCAGATTACCAAATCTTTCAACACACAGCATAGTTCAACCGTTCAATAGTGAACTGTGAAAAGCTAAACTGCTAATAGAAAGGTAAAAAAGGAATAATTTTCTAAAACCTGTTCTACATCACACTCCTCCTTAAGCTCGTACCGTGGAGGAGAAGCAAAACACAACGTCAATGAAATAGAAAAGAAAAAAAAAACTACAAAGCCAATCTAACCAAACTGAACGCACAGAAGGAGCGTTTGCGAAATGAACGAAGCTTGTACGTCCAATGTATAGAAAAGAAAACTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACTAGTAAGAAACAAGCGTATAACATGTCGGGTGTTGCTTTGATGGTTACGTCTAAATGAAAGCTATAGATTTGTTTTAGAAACAAAACGTATAGATCCATCATTTCAGCAGCATAAACCACAAAACACGTTAAAAGCGATAAGCATGAAGAAAACAGTCAGTGTTAGTGTATGCTGGGTGGAAGCT]
[+] EMBL AL692642 [GATCCCCCCGCAGGTTAAAAGGAAAAAGAAGGAGAAGNCAAAAACAACTACAGAAGGAAAACGGATACATTTAATCAGCAACCATCCCGAGCAGATTACCAAATCTTTCAACACACAGCATAGTTCAACCGTTCAATAGTGAACTGTGAAAAGCTAAACTGCTAATAGAAAGGTAAAAAAGGAATAATTTTCTAAAACCTGTTCTACATCACACTCCTCCTTAAGCTCGTACCGTGGAGGAGAAGCAAAACACAACGTCAATGAAATAGAAAAGAAAAAAAAAACTACAAAGCCAATCTAACCAAACTGAACGCACAGAAGGAGCGTTTGCGAAATGAACGAAGCTTGTACGTCCAATGTATAGAAAAGAAAACTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACTAGTAAGAAACAAGCGTATAACATGTCGGGTGTTGCTTTGATGGTTACGTCTAAATGAAAGCTATAGATTTGTTTTAGAAACAAAACGTATAGATCCATCATTTCAGCAGCATAAACCACAAAACACGTTAAAAGCGATAAGCATGAAGAAAACAGTCAGTGTTAGTGTATGCTGGGTGGAAGCT]
[+] EMBL BX619020 [ AATGAAATAGAAAAGAAAAAAAAAACTACAAAGCCAATCTAACCAAACTGAACGCAGAGAAGGAGCGTTTGCGAAATGAACGAAGCTTGTACGTCCAATGTATAGAAAAGAAAACTACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5098#0 TTTTANTCNATAATTACGACCTTTGTTTAGTTTTATTTTCTCACGATTGTTTGTCAATTC 60
consensus_5098#1 ------------------------------------------------------------
consensus_5098#0 GCTTTGTCGATTCGCTTTGGGGTTTGTTCACTTTACAGCAGTTTTATATAAACGTGTACA 120
consensus_5098#1 --------GATCCCCCCGCAGGTTAAAAGGAAAAAGAAGGAGAAGNCAAAAACAACTACA 52
*** * * **** * * * **** ****
consensus_5098#0 AGTATAAATGTAAATAAAACAAAACATT--CCATTAAAAACAGGAAACAATGTTAATGGG 178
consensus_5098#1 -GAAGGAAAACGGATACATTTAATCAGCAACCATCCCGAGCAGATTACCAAATCTTTCAA 111
* * ** *** * ** ** **** * *** ** * * *
consensus_5098#0 CCTGC----TCGGCGAGCTGAAGAAGAGTAATGTGGGAAAGACATTGCCGCTTGCTTGCC 234
consensus_5098#1 CACACAGCATAGTTCAACCGTTCAATAGTGAACTGTGAAAAGCTAAACTGCT-AATAGAA 170
* * * * * * * ** *** * ** **** * * *** * *
consensus_5098#0 CAGTCAACTATGTCTCTTGTCTTCTACGCACGGTTACACTTTCCGGTCCGGTTCCGTGTG 294
consensus_5098#1 AGGTAAAAAAGGAATA--ATTTTCTAAAACCTGTTCTACATCACACTCC---TCCTTAAG 225
** ** * * * * ***** * *** ** * * *** *** * *
consensus_5098#0 CTTATTGGTGGTATTGATTGGTTCGAATGTGTGTTTTTTTATATTCCTGTGCTTGGTTCG 354
consensus_5098#1 CTCGT--ACCGTGGAGGAGAAGCAAAACACAACGTCAATGAAATAGAAAAGAAAAAAAAA 283
** * ** * ** * * * ** *
consensus_5098#0 GTTCGCTCTTTGTGCGTTTCCGGTGTTTCCTTTCGCTTTGTTGACTGTTATCGTAGCTTT 414
consensus_5098#1 ACT----------ACAAAGCCAATCTAACCAA--ACTGAACGCACAGA---AGGAGCGTT 328
* * ** * * ** ** ** * * *** **
consensus_5098#0 TATTCTATGAATTGTTCTTANAACTTGTTGTTTGTTTTGACGAGTGTTTGAATTGAGCTT 474
consensus_5098#1 TGCGAAATGAACGAAGCTTGTA-CGTCCAATGTATAGAAAAGAAAACTACAAG-AAGAAG 386
* ***** *** * * * * * * * ** * ** **
consensus_5098#0 CATATTTCTTCTTTTTTTTTTCTTCCAATGCAATGGTGCATTGTTTCGTTCGCAACAGTT 534
consensus_5098#1 AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACTAGTAAGAAACAAGC 446
* * * * * * * * ** * ****
consensus_5098#0 TAATAA-ATTTTAGTTGTTTTCCTGGNGGTTGTGCTTCTTTCAGCGCGCTTTTTGTATCT 593
consensus_5098#1 GTATAACATGTCGGGTGTTGCTTTGATGGTTACGTCTAAATGAAAGCTATAGATTTGTTT 506
**** ** * * **** ** **** * * * * ** * * * * *
consensus_5098#0 AAACGAAGCAAAATATAGAAACTAAACCCTGCA--AGCTTCCACCAGCATACAC--TAAC 649
consensus_5098#1 TA--GAAACAAAACGTATAGATCCATCATTTCAGCAGCATAAACCACAAAACACGTTAAA 564
* *** ***** ** * * * * * ** *** * **** * **** ***
consensus_5098#0 ACTGACTGGTTTCTTCATCTTA-CCGCTTTTAACGTGTTTTGNGGGTCATGCTGCTGAAA 708
consensus_5098#1 AGCGATAAGCATGAAGAAAACAGTCAGTGTTAGTGTATGCTGGGTGG-AAGCT------- 616
* ** * * * * * * *** ** * ** * * * ***
consensus_5098#0 TGATGAATCTATACGTTTTGTTTCTAAAA 737
consensus_5098#1 -----------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||