Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5099 cluster # 5099       Sequences # 4       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5099#0 length = 2120 sequences # 2  
consensus_5099#1 length = 2072 sequences # 1  
consensus_5099#2 length = 401 sequences # 1  

consensusID : consensus_5099#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2120
fasta sequence
                              [CATATTCAATCTTTCAAAGTGTAAAGTATGGCCACTTTAACACAGAAATTTCACGGACTTCTGCAACACCCGCTGGAGCCACTGTTTCTTCCCAAGAACGATGGCACACTTTTCTACGATCTTCCGGAGCGCTTCCTTACCTCGCGCTATAGCCCGATTGGGCAAAATTTGGCCAATCGCTTTGGACCAAATTCACCTGCCTCGTCGCAAGTCAGCAATGATACGGGCGTGCCGCCAACGGTGGTGACCATCAAAGATTTGGACGAGCTGCCGGATCTTACGTTCGCCACGTGGATTAAACGCCGGGACTCGTTCTCCCTTTTCAATCCGGAACATCGGAAAGCGGCAGGAAAGCTGACCAAGCTGTTCTTGGATCAACCGAATGCGGATAGGCTCGTCGATGTGGCCGCTTACGCTCGCGATCGTCTGAATGCACCGTTGTTCCAGTACGCACTGTCCGTGGCGTTGCTGCACCGTCCGGACACGAAGAGCGTGTCCGTACCGTCGTTGTTACACCTGTTTCCAGATCAGTTCATTGATCCGGCTGCCCAGGTTAGGATGATGGAAGAAGGATCAATCGTGCTGGATGAGAACCGGATGCCGATTCCCATTCCAATGAACTATACCGCTACGGATGCAGAGCCTGAGCAGCGAATGGCATTCTTCCGAGAGGATATTGGAGTAAATCTGCACCACTGGCACTGGCATTTGGTCTATCCCGCTTCTGGGCCACCGGATGTTGTGCGGAAGGATCGACGGGGCGAGCTGTTCTACTACATGCACCAGCAGTTGCTCGCCCGCTATCAAATTGATCGTTATGCGCAAGGACTGGGACGAATCGAACCCTTAGCTAATCTGCGCGAACCGGTGCGCGAAGCCTACTACCCTAAGTTGTTGCGTACATCCAACAATCGCACCTTCTGTCCCCGATATCCCGGGATGACGATCAGTGACGTTGCACGCAGCGCCGACCGATTAGAGGTTAGAATAGCTGATATCGAATCGTGGCTTCCCCGCGTACTAGAGGCGATCGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGACGAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAATCGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGATCCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGGGATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCTCGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTTGAAACGCAGCTCGATCGCGCTGGTGGCGCTGTCAACAGTTTTGTAACCTTTTGGCAGCGCTCGCAAGTTGATCTGCGTGCTGGAATAGACTTTTCTGCAGCGGGCAGTGCCTTCGTTAGCTTCACGCATCTTCAGTGTGCTCCATTCGTTTATCGGCTTCGCATCAATTCAACTGCTCGCTCAAACAGACAAGACACGGTACGGATCTTTCTCTTGCCGCGCCAAAACGAACAGGGTCGCCCTTTGTCTTTTGAGGATCGTCGTCTGCTGGCCATCGAGCTGGACAGCTTCCGTGTAAATTTGCGCCCTGGCATGAACAACATCGTACGACAGTCGTCCAACTCGAGCGTTACGATTCCGTTCGAACGGACCTTTGGTAACGTGGAGCAGGCTAACGCAGGCAATGCACAATCGCGATTCTGTGGTTGCGGTTGGCCGGCACATATGCTACTGCCGAAAGGGAATGCGAACGGCGTCGAGTTTGACTTGTTTGCAATGGTCTCGCGGTTTGAAGACGATAACGCTAACGTTAACTACGATGAGAATGCTGGGTGCGATGATTCTTATGCGTTCTGCGGACTGCGGGATCGCGTTTACCCTAGCCGTCGTGCGATGGGCTTTCCATTCGATAGAAGAGCATCGAACGGTGTTAGATCAGTGGCAGATTTCGTTGCACCGTACAAAAACATGCGATTGGCGACTGTGACCTTACGTTTCATGAATACTATTATCGATCGTCC]

[+] EMBL BX628411             [CATATTCAATCTTTCAAAGTGTAAAGTATGGCCACTTTAACACAGAAATTTCACGGACTTCTGCAACACCCGCTGGAGCCACTGTTTCTTCCCAAGAACGATGGCACACTTTTCTACGATCTTCCGGAGCGCTTCCTTACCTCGCGCTATAGCCCGATTGGGCAAAATTTGGCCAATCGCTTTGGACCAAATTCACCTGCCTCGTCGCAAGTCAGCAATGATACGGGCGTGCCGCCAACGGTGGTGACCATCAAAGATTTGGACGAGCTGCCGGATCTTACGTTCGCCACGTGGATTAAACGCCGGGACTCGTTCTCCCTTTTCAATCCGGAACATCGGAAAGCGGCAGGAAAGCTGACCAAGCTGTTCTTGGATCAACCGAATGCGGATAGGCTCGTCGATGTGGCCGCTTACGCTCGCGATCGTCTGAATGCACCGTTGTTCCAGTACGCACTGTCCGTGGCGTTGCTGCACCGTCCGGACACGAAGAGCGTGTCCGTACCGTCGTTGTTACACCTGTTTCCAGATCAGTTCATTGATCCGGCTGCCCAGGTTAGGATGATGGAAGAAGGATCAATCGTGCTGGATGAGAACCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AGA459961            [                                    TTAACACAGAAATTTCACGGACTTCTGCAACACCCGCTGGAGCCACTGTTTCTTCCCAAGAACGATGGCACACTTTTCTACGATCTTCCGGAGCGCTTCCTTACCTCGCGCTATAGCCCGATTGGGCAAAATTTGGCCAATCGCTTTGGACCAAATTCACCTGCCTCGTCGCAAGTCAGCAATGATACGGGCGTGCCGCCAACGGTGGTGACCATCAAAGATTTGGACGAGCTGCCGGATCTTACGTTCGCCACGTGGATTAAACGCCGGGACTCGTTCTCCCTTTTCAATCCGGAACATCGGAAAGCGGCAGGAAAGCTGACCAAGCTGTTCTTGGATCAACCGAATGCGGATAGGCTCGTCGATGTGGCCGCTTACGCTCGCGATCGTCTGAATGCACCGTTGTTCCAGTACGCACTGTCCGTGGCGTTGCTGCACCGTCCGGACACGAAGAGCGTGTCCGTACCGTCGTTGTTACACCTGTTTCCAGATCAGTTCATTGATCCGGCTGCCCAGGTTAGGATGATGGAAGAAGGATCAATCGTGCTGGATGAGAACCGGATGCCGATTCCCATTCCAATGAACTATACCGCTACGGATGCAGAGCCTGAGCAGCGAATGGCATTCTTCCGAGAGGATATTGGAGTAAATCTGCACCACTGGCACTGGCATTTGGTCTATCCCGCTTCTGGGCCACCGGATGTTGTGCGGAAGGATCGACGGGGCGAGCTGTTCTACTACATGCACCAGCAGTTGCTCGCCCGCTATCAAATTGATCGTTATGCGCAAGGACTGGGACGAATCGAACCCTTAGCTAATCTGCGCGAACCGGTGCGCGAAGCCTACTACCCTAAGTTGTTGCGTACATCCAACAATCGCACCTTCTGTCCCCGATATCCCGGGATGACGATCAGTGACGTTGCACGCAGCGCCGACCGATTAGAGGTTAGAATAGCTGATATCGAATCGTGGCTTCCCCGCGTACTAGAGGCGATCGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGACGAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAATCGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGATCCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGGGATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCTCGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTTGAAACGCAGCTCGATCGCGCTGGTGGCGCTGTCAACAGTTTTGTAACCTTTTGGCAGCGCTCGCAAGTTGATCTGCGTGCTGGAATAGACTTTTCTGCAGCGGGCAGTGCCTTCGTTAGCTTCACGCATCTTCAGTGTGCTCCATTCGTTTATCGGCTTCGCATCAATTCAACTGCTCGCTCAAACAGACAAGACACGGTACGGATCTTTCTCTTGCCGCGCCAAAACGAACAGGGTCGCCCTTTGTCTTTTGAGGATCGTCGTCTGCTGGCCATCGAGCTGGACAGCTTCCGTGTAAATTTGCGCCCTGGCATGAACAACATCGTACGACAGTCGTCCAACTCGAGCGTTACGATTCCGTTCGAACGGACCTTTGGTAACGTGGAGCAGGCTAACGCAGGCAATGCACAATCGCGATTCTGTGGTTGCGGTTGGCCGGCACATATGCTACTGCCGAAAGGGAATGCGAACGGCGTCGAGTTTGACTTGTTTGCAATGGTCTCGCGGTTTGAAGACGATAACGCTAACGTTAACTACGATGAGAATGCTGGGTGCGATGATTCTTATGCGTTCTGCGGACTGCGGGATCGCGTTTACCCTAGCCGTCGTGCGATGGGCTTTCCATTCGATAGAAGAGCATCGAACGGTGTTAGATCAGTGGCAGATTTCGTTGCACCGTACAAAAACATGCGATTGGCGACTGTGACCTTACGTTTCATGAATACTATTATCGATCGTCC]


>consensus_5099#0 CATATTCAATCTTTCAAAGTGTAAAGTATGGCCACTTTAACACAGAAATTTCACGGACTT CTGCAACACCCGCTGGAGCCACTGTTTCTTCCCAAGAACGATGGCACACTTTTCTACGAT CTTCCGGAGCGCTTCCTTACCTCGCGCTATAGCCCGATTGGGCAAAATTTGGCCAATCGC TTTGGACCAAATTCACCTGCCTCGTCGCAAGTCAGCAATGATACGGGCGTGCCGCCAACG GTGGTGACCATCAAAGATTTGGACGAGCTGCCGGATCTTACGTTCGCCACGTGGATTAAA CGCCGGGACTCGTTCTCCCTTTTCAATCCGGAACATCGGAAAGCGGCAGGAAAGCTGACC AAGCTGTTCTTGGATCAACCGAATGCGGATAGGCTCGTCGATGTGGCCGCTTACGCTCGC GATCGTCTGAATGCACCGTTGTTCCAGTACGCACTGTCCGTGGCGTTGCTGCACCGTCCG GACACGAAGAGCGTGTCCGTACCGTCGTTGTTACACCTGTTTCCAGATCAGTTCATTGAT CCGGCTGCCCAGGTTAGGATGATGGAAGAAGGATCAATCGTGCTGGATGAGAACCGGATG CCGATTCCCATTCCAATGAACTATACCGCTACGGATGCAGAGCCTGAGCAGCGAATGGCA TTCTTCCGAGAGGATATTGGAGTAAATCTGCACCACTGGCACTGGCATTTGGTCTATCCC GCTTCTGGGCCACCGGATGTTGTGCGGAAGGATCGACGGGGCGAGCTGTTCTACTACATG CACCAGCAGTTGCTCGCCCGCTATCAAATTGATCGTTATGCGCAAGGACTGGGACGAATC GAACCCTTAGCTAATCTGCGCGAACCGGTGCGCGAAGCCTACTACCCTAAGTTGTTGCGT ACATCCAACAATCGCACCTTCTGTCCCCGATATCCCGGGATGACGATCAGTGACGTTGCA CGCAGCGCCGACCGATTAGAGGTTAGAATAGCTGATATCGAATCGTGGCTTCCCCGCGTA CTAGAGGCGATCGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGAC GAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAAT CGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGAT CCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGG GATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCT CGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTT GAAACGCAGCTCGATCGCGCTGGTGGCGCTGTCAACAGTTTTGTAACCTTTTGGCAGCGC TCGCAAGTTGATCTGCGTGCTGGAATAGACTTTTCTGCAGCGGGCAGTGCCTTCGTTAGC TTCACGCATCTTCAGTGTGCTCCATTCGTTTATCGGCTTCGCATCAATTCAACTGCTCGC TCAAACAGACAAGACACGGTACGGATCTTTCTCTTGCCGCGCCAAAACGAACAGGGTCGC CCTTTGTCTTTTGAGGATCGTCGTCTGCTGGCCATCGAGCTGGACAGCTTCCGTGTAAAT TTGCGCCCTGGCATGAACAACATCGTACGACAGTCGTCCAACTCGAGCGTTACGATTCCG TTCGAACGGACCTTTGGTAACGTGGAGCAGGCTAACGCAGGCAATGCACAATCGCGATTC TGTGGTTGCGGTTGGCCGGCACATATGCTACTGCCGAAAGGGAATGCGAACGGCGTCGAG TTTGACTTGTTTGCAATGGTCTCGCGGTTTGAAGACGATAACGCTAACGTTAACTACGAT GAGAATGCTGGGTGCGATGATTCTTATGCGTTCTGCGGACTGCGGGATCGCGTTTACCCT AGCCGTCGTGCGATGGGCTTTCCATTCGATAGAAGAGCATCGAACGGTGTTAGATCAGTG GCAGATTTCGTTGCACCGTACAAAAACATGCGATTGGCGACTGTGACCTTACGTTTCATG AATACTATTATCGATCGTCC



consensusID : consensus_5099#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2072
fasta sequence
                              [AACATTCGGGACAAGTTTCGTGGCCTGTTACAGCATCCGTACGAACCGCTGTTTCTACCGAAAAGCGATGGCCAACTATTTTACGACCTGCCGGAGAAGTTCTTCACCGATCGTTATCGCCCGATCGGGCAAAATCTGATCAATAGGTTCAGTGCGGCGGCGGCTGCACCGGCCGGTACGAGTGCGGACACACCGACCATGAATCGGGTATCGCTCAACAACATCCCCGATCCGGACATAAAGTTTGCCGAAGCCGTACCACGACGCGGAGCGTTCTCTCTCTTCATCCCGGAGCATCGCGTTATCGCTGGACGTTTGATCAAGCTGTTCCTGGATCAACCGGACGCCGATACACTGGGGGATGTCGCCGCTTACGCCAGGGACCGACTGAACGGTCCACTCTTTCAGTATGCACTGGCAAGTGCTTTGCTGCATCGAAGCGATACGAGTGATGTTCCCGTGCCTTCATTTTTGCACCTTTTCCCGGATCAGTTTATAGACCCAGCAGCGTTTCCTCAAATTCGCGAGGAAGGCCGTGCCGTGTTGCAACCGAATCGGATGTCGATTGACATTCCGCTGAACTACACGGCATCGGATCGTGTGACCGAGCAGCGGTTGGCTTACTTCCGGGAGGACATTGGCGTGAATCTTCATCACTGGCATTGGCATCTGGTGTACCCGGCAGAAGGGCCGGAACGGGTTGTGCGGAAGGATCGCCGGGGTGAGCTGTTCTACTACATGCACCAGCAGATGATTGCCCGCTATCAGGTCGAACGTTACAGCCAAGGTTTGGGGCGTGTGACTCCACTAGACAATCTGCGGACGCCCATCCCCGAGCCCTACTATCCGAAGATTCTGCGCAGTGCCAACAATCGTACGTATCCTGCGCGCTATGCCAACATGACGCTGGAGGATGTTATACGCCCGAATGATGGGCTGCGTGTGATCATTTCGGAAGTAGAACGTCAGCTTCAGCGCATTATTGCAGCGATTGACGAAGGTGTTGTGGTTGCGCCAAGCGGACAGCGCACACAGTTGGACAACTTCCGCGGCATCGATATATTGGGCAATATCGTTGAAAGCTCGAGCATATCCGTGAACCGCCAGCTGTACGGCGATACGCACAACAGTGGGCACGTATTGCTTTCGCTCGTGCACGATCCGAGGGAAGATTTTCTTGAGAGCTTCGGTGTGATGGGAGATGTGACGACGGCGATGCGTGATCCAGTCTTCTACCGCTGGCACACCTTCGTGGACAGCATTTTCCAGCGCCACAAGCAACGGTTCGCACCGTACGGGCCGGCCGAATTGAGAAACCCGGGCGTTAACTTGCTGAGCCTGGAAACGGAGCTAGATCGGCGCGATTCGGTCAAGAACACGTTGCTAACGTTCTGGCAACGTTCGCAGTTCGATCTGGGTGCTGGTATAGACTTCGGCGCAGAGGGCAGCGTGTTCGTAACTTTCACTCATCTACAGCACGCCGCATTCAACTATCGGCTGCAGGTTGCCTATTCTGGTACGGCCAAGCCTGCGACACTGCGCATCTTTCTGGCACCGAAGCGTAATGAACGAGGACAATCGTTGACGTTTGAAGAGCAACGACGGCTGGCTATCGAGATGGATACATTCCGTGTGAATTTAACACCTGGCATTAACAACATCATTCGACGATCGGCAAACTCGAGTGTTACCATCCCATACGAACGCACCTTCCGCAACGTGGCTAACACAAACATTGGTGATGCAAATTTCCGCTTCTGCGGCTGTGGATGGCCATCGCACATGCTTGTGCCGAAAGGCGATCAGTTCGGTGTGGAGTACGATCTTTTCGCGATGCTGTCCGATCATGAGCAGGACCGGGTGAATCCATTGTTTGATGAACGCACGGATTGCAATGATGCACACTCGTTCTGTGGTTTGAGGGATCGTACGTATCCAGATGCACGCAACATGGGCTTTCCGTTGGATCGTCGTGTAGCGAACACGGTTCGATCGTTCCAGGATTTCGTTGCGCCTTATCAGAACATGCGTGTCGCGACGATAACGATTCGCTTCACCAATACGGTTGTGGA]

[+] EMBL AGA459960            [AACATTCGGGACAAGTTTCGTGGCCTGTTACAGCATCCGTACGAACCGCTGTTTCTACCGAAAAGCGATGGCCAACTATTTTACGACCTGCCGGAGAAGTTCTTCACCGATCGTTATCGCCCGATCGGGCAAAATCTGATCAATAGGTTCAGTGCGGCGGCGGCTGCACCGGCCGGTACGAGTGCGGACACACCGACCATGAATCGGGTATCGCTCAACAACATCCCCGATCCGGACATAAAGTTTGCCGAAGCCGTACCACGACGCGGAGCGTTCTCTCTCTTCATCCCGGAGCATCGCGTTATCGCTGGACGTTTGATCAAGCTGTTCCTGGATCAACCGGACGCCGATACACTGGGGGATGTCGCCGCTTACGCCAGGGACCGACTGAACGGTCCACTCTTTCAGTATGCACTGGCAAGTGCTTTGCTGCATCGAAGCGATACGAGTGATGTTCCCGTGCCTTCATTTTTGCACCTTTTCCCGGATCAGTTTATAGACCCAGCAGCGTTTCCTCAAATTCGCGAGGAAGGCCGTGCCGTGTTGCAACCGAATCGGATGTCGATTGACATTCCGCTGAACTACACGGCATCGGATCGTGTGACCGAGCAGCGGTTGGCTTACTTCCGGGAGGACATTGGCGTGAATCTTCATCACTGGCATTGGCATCTGGTGTACCCGGCAGAAGGGCCGGAACGGGTTGTGCGGAAGGATCGCCGGGGTGAGCTGTTCTACTACATGCACCAGCAGATGATTGCCCGCTATCAGGTCGAACGTTACAGCCAAGGTTTGGGGCGTGTGACTCCACTAGACAATCTGCGGACGCCCATCCCCGAGCCCTACTATCCGAAGATTCTGCGCAGTGCCAACAATCGTACGTATCCTGCGCGCTATGCCAACATGACGCTGGAGGATGTTATACGCCCGAATGATGGGCTGCGTGTGATCATTTCGGAAGTAGAACGTCAGCTTCAGCGCATTATTGCAGCGATTGACGAAGGTGTTGTGGTTGCGCCAAGCGGACAGCGCACACAGTTGGACAACTTCCGCGGCATCGATATATTGGGCAATATCGTTGAAAGCTCGAGCATATCCGTGAACCGCCAGCTGTACGGCGATACGCACAACAGTGGGCACGTATTGCTTTCGCTCGTGCACGATCCGAGGGAAGATTTTCTTGAGAGCTTCGGTGTGATGGGAGATGTGACGACGGCGATGCGTGATCCAGTCTTCTACCGCTGGCACACCTTCGTGGACAGCATTTTCCAGCGCCACAAGCAACGGTTCGCACCGTACGGGCCGGCCGAATTGAGAAACCCGGGCGTTAACTTGCTGAGCCTGGAAACGGAGCTAGATCGGCGCGATTCGGTCAAGAACACGTTGCTAACGTTCTGGCAACGTTCGCAGTTCGATCTGGGTGCTGGTATAGACTTCGGCGCAGAGGGCAGCGTGTTCGTAACTTTCACTCATCTACAGCACGCCGCATTCAACTATCGGCTGCAGGTTGCCTATTCTGGTACGGCCAAGCCTGCGACACTGCGCATCTTTCTGGCACCGAAGCGTAATGAACGAGGACAATCGTTGACGTTTGAAGAGCAACGACGGCTGGCTATCGAGATGGATACATTCCGTGTGAATTTAACACCTGGCATTAACAACATCATTCGACGATCGGCAAACTCGAGTGTTACCATCCCATACGAACGCACCTTCCGCAACGTGGCTAACACAAACATTGGTGATGCAAATTTCCGCTTCTGCGGCTGTGGATGGCCATCGCACATGCTTGTGCCGAAAGGCGATCAGTTCGGTGTGGAGTACGATCTTTTCGCGATGCTGTCCGATCATGAGCAGGACCGGGTGAATCCATTGTTTGATGAACGCACGGATTGCAATGATGCACACTCGTTCTGTGGTTTGAGGGATCGTACGTATCCAGATGCACGCAACATGGGCTTTCCGTTGGATCGTCGTGTAGCGAACACGGTTCGATCGTTCCAGGATTTCGTTGCGCCTTATCAGAACATGCGTGTCGCGACGATAACGATTCGCTTCACCAATACGGTTGTGGA]


>consensus_5099#1 AACATTCGGGACAAGTTTCGTGGCCTGTTACAGCATCCGTACGAACCGCTGTTTCTACCG AAAAGCGATGGCCAACTATTTTACGACCTGCCGGAGAAGTTCTTCACCGATCGTTATCGC CCGATCGGGCAAAATCTGATCAATAGGTTCAGTGCGGCGGCGGCTGCACCGGCCGGTACG AGTGCGGACACACCGACCATGAATCGGGTATCGCTCAACAACATCCCCGATCCGGACATA AAGTTTGCCGAAGCCGTACCACGACGCGGAGCGTTCTCTCTCTTCATCCCGGAGCATCGC GTTATCGCTGGACGTTTGATCAAGCTGTTCCTGGATCAACCGGACGCCGATACACTGGGG GATGTCGCCGCTTACGCCAGGGACCGACTGAACGGTCCACTCTTTCAGTATGCACTGGCA AGTGCTTTGCTGCATCGAAGCGATACGAGTGATGTTCCCGTGCCTTCATTTTTGCACCTT TTCCCGGATCAGTTTATAGACCCAGCAGCGTTTCCTCAAATTCGCGAGGAAGGCCGTGCC GTGTTGCAACCGAATCGGATGTCGATTGACATTCCGCTGAACTACACGGCATCGGATCGT GTGACCGAGCAGCGGTTGGCTTACTTCCGGGAGGACATTGGCGTGAATCTTCATCACTGG CATTGGCATCTGGTGTACCCGGCAGAAGGGCCGGAACGGGTTGTGCGGAAGGATCGCCGG GGTGAGCTGTTCTACTACATGCACCAGCAGATGATTGCCCGCTATCAGGTCGAACGTTAC AGCCAAGGTTTGGGGCGTGTGACTCCACTAGACAATCTGCGGACGCCCATCCCCGAGCCC TACTATCCGAAGATTCTGCGCAGTGCCAACAATCGTACGTATCCTGCGCGCTATGCCAAC ATGACGCTGGAGGATGTTATACGCCCGAATGATGGGCTGCGTGTGATCATTTCGGAAGTA GAACGTCAGCTTCAGCGCATTATTGCAGCGATTGACGAAGGTGTTGTGGTTGCGCCAAGC GGACAGCGCACACAGTTGGACAACTTCCGCGGCATCGATATATTGGGCAATATCGTTGAA AGCTCGAGCATATCCGTGAACCGCCAGCTGTACGGCGATACGCACAACAGTGGGCACGTA TTGCTTTCGCTCGTGCACGATCCGAGGGAAGATTTTCTTGAGAGCTTCGGTGTGATGGGA GATGTGACGACGGCGATGCGTGATCCAGTCTTCTACCGCTGGCACACCTTCGTGGACAGC ATTTTCCAGCGCCACAAGCAACGGTTCGCACCGTACGGGCCGGCCGAATTGAGAAACCCG GGCGTTAACTTGCTGAGCCTGGAAACGGAGCTAGATCGGCGCGATTCGGTCAAGAACACG TTGCTAACGTTCTGGCAACGTTCGCAGTTCGATCTGGGTGCTGGTATAGACTTCGGCGCA GAGGGCAGCGTGTTCGTAACTTTCACTCATCTACAGCACGCCGCATTCAACTATCGGCTG CAGGTTGCCTATTCTGGTACGGCCAAGCCTGCGACACTGCGCATCTTTCTGGCACCGAAG CGTAATGAACGAGGACAATCGTTGACGTTTGAAGAGCAACGACGGCTGGCTATCGAGATG GATACATTCCGTGTGAATTTAACACCTGGCATTAACAACATCATTCGACGATCGGCAAAC TCGAGTGTTACCATCCCATACGAACGCACCTTCCGCAACGTGGCTAACACAAACATTGGT GATGCAAATTTCCGCTTCTGCGGCTGTGGATGGCCATCGCACATGCTTGTGCCGAAAGGC GATCAGTTCGGTGTGGAGTACGATCTTTTCGCGATGCTGTCCGATCATGAGCAGGACCGG GTGAATCCATTGTTTGATGAACGCACGGATTGCAATGATGCACACTCGTTCTGTGGTTTG AGGGATCGTACGTATCCAGATGCACGCAACATGGGCTTTCCGTTGGATCGTCGTGTAGCG AACACGGTTCGATCGTTCCAGGATTTCGTTGCGCCTTATCAGAACATGCGTGTCGCGACG ATAACGATTCGCTTCACCAATACGGTTGTGGA



consensusID : consensus_5099#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 401
fasta sequence
                              [ATCCCCCGAGGTTNATATCGAATCGTGGCTTCCCCGCGTACTAGAGGCGACGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGACGAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAATCGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGATCCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGGGATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCTCGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTTGA]

[+] EMBL AL692653             [ATCCCCCGAGGTTNATATCGAATCGTGGCTTCCCCGCGTACTAGAGGCGACGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGACGAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAATCGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGATCCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGGGATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCTCGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTTGA]


>consensus_5099#2 ATCCCCCGAGGTTNATATCGAATCGTGGCTTCCCCGCGTACTAGAGGCGACGATGCTGGA TTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGACGAAACAAGAGGTATAGACGTG TTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAATCGCAATTTGTACGGTGATGTG CACAATATGGGACATGTGCTGCTGGCTTTCATTCACGATCCACGCGGAACGTATCTGGAA TCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGGGATCCGATCTTTTATCGCTGG CACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCTCGTCTCGCTCCGTACACCATG GCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTTGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5099#0      CATATTCAATCTTTCAAAGTGTAAAGTATGGCCACTTTAACACAGAAATTTCACGGACTT 60
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      ---------------------------------AACATTCGGGACAAGTTTCGTGGCCTG 27
                                                                                  

consensus_5099#0      CTGCAACACCCGCTGGAGCCACTGTTTCTTCCCAAGAACGATGGCACACTTTTCTACGAT 120
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TTACAGCATCCGTACGAACCGCTGTTTCTACCGAAAAGCGATGGCCAACTATTTTACGAC 87
                                                                                  

consensus_5099#0      CTTCCGGAGCGCTTCCTTACCTCGCGCTATAGCCCGATTGGGCAAAATTTGGCCAATCGC 180
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      CTGCCGGAGAAGTTCTTCACCGATCGTTATCGCCCGATCGGGCAAAATCTGATCAATAGG 147
                                                                                  

consensus_5099#0      TTTGGACCAAATTCACCTGCCTCGTCGCAAGTCAGCAATGATACGGGCGTGCCGCCAACG 240
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TTCAGTGCGGCGGCGGCTGCACCGGCCGGTACGAGTGCGGACACACCGACCATGAATCGG 207
                                                                                  

consensus_5099#0      GTGGTGACCATCAAAGATTTGGACGAGCTGCCGGATCTTACGTTCGCCACGTGGATTAAA 300
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      GTATCGCTCAACAACATCCCCGAT------CCGGACATAAAGTTTGCCGAAGCCGTACCA 261
                                                                                  

consensus_5099#0      CGCCGGGACTCGTTCTCCCTTTTCAATCCGGAACATCGGAAAGCGGCAGGAAAGCTGACC 360
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      CGACGCGGAGCGTTCTCTCTCTTCATCCCGGAGCATCGCGTTATCGCTGGACGTTTGATC 321
                                                                                  

consensus_5099#0      AAGCTGTTCTTGGATCAACCGAATGCGGATAGGCTCGTCGATGTGGCCGCTTACGCTCGC 420
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      AAGCTGTTCCTGGATCAACCGGACGCCGATACACTGGGGGATGTCGCCGCTTACGCCAGG 381
                                                                                  

consensus_5099#0      GATCGTCTGAATGCACCGTTGTTCCAGTACGCACTGTCCGTGGCGTTGCTGCACCGTCCG 480
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      GACCGACTGAACGGTCCACTCTTTCAGTATGCACTGGCAAGTGCTTTGCTGCATCGAAGC 441
                                                                                  

consensus_5099#0      GACACGAAGAGCGTGTCCGTACCGTCGTTGTTACACCTGTTTCCAGATCAGTTCATTGAT 540
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      GATACGAGTGATGTTCCCGTGCCTTCATTTTTGCACCTTTTCCCGGATCAGTTTATAGAC 501
                                                                                  

consensus_5099#0      CCGGCTGCCCAGGTTAGGATGATGGAAGAAGGATCAATCGTGCTGGATGAGAACCGGATG 600
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      CCAGCAGCGTTTCCTCAAATTCGCGAGGAAGGCCGTGCCGTGTTGCAACCGAATCGGATG 561
                                                                                  

consensus_5099#0      CCGATTCCCATTCCAATGAACTATACCGCTACGGATGCAGAGCCTGAGCAGCGAATGGCA 660
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TCGATTGACATTCCGCTGAACTACACGGCATCGGATCGTGTGACCGAGCAGCGGTTGGCT 621
                                                                                  

consensus_5099#0      TTCTTCCGAGAGGATATTGGAGTAAATCTGCACCACTGGCACTGGCATTTGGTCTATCCC 720
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TACTTCCGGGAGGACATTGGCGTGAATCTTCATCACTGGCATTGGCATCTGGTGTACCCG 681
                                                                                  

consensus_5099#0      GCTTCTGGGCCACCGGATGTTGTGCGGAAGGATCGACGGGGCGAGCTGTTCTACTACATG 780
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      GCAGAAGGGCCGGAACGGGTTGTGCGGAAGGATCGCCGGGGTGAGCTGTTCTACTACATG 741
                                                                                  

consensus_5099#0      CACCAGCAGTTGCTCGCCCGCTATCAAATTGATCGTTATGCGCAAGGACTGGGACGAATC 840
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      CACCAGCAGATGATTGCCCGCTATCAGGTCGAACGTTACAGCCAAGGTTTGGGGCGTGTG 801
                                                                                  

consensus_5099#0      GAACCCTTAGCTAATCTGCGCGAACCGGTGCGCGAAGCCTACTACCCTAAGTTGTTGCGT 900
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      ACTCCACTAGACAATCTGCGGACGCCCATCCCCGAGCCCTACTATCCGAAGATTCTGCGC 861
                                                                                  

consensus_5099#0      ACATCCAACAATCGCACCTTCTGTCCCCGATATCCCGGGATGACGATCAGTGACGTTGCA 960
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      AGTGCCAACAATCGTACGTATCCTGCGCGCTATGCCAACATGACGCTGGAGGATGTTATA 921
                                                                                  

consensus_5099#0      CGCAGCGCCGACCGATTAGAGGTTAGAATAGCTGATATCGAATCGTGGCTTCCCCGCGTA 1020
consensus_5099#2      --------------------ATCCCCCGAGGTTNATATCGAATCGTGGCTTCCCCGCGTA 40
consensus_5099#1      CGCCCGAATGATGGGCTGCGTGTGATCATTTCGGAAGTAGAACGTCAGCTTCAGCGCATT 981
                                                        *  * ***     *****  *** * 

consensus_5099#0      CTAGAGGCGATCGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGAC 1080
consensus_5099#2      CTAGAGGCGA-CGATGCTGGATTTGCAGTTAGTGATGACGGTGTAAGAGTGCCTCTGGAC 99
consensus_5099#1      ATTGCAGCGATTGACGAAGGTGTTGTGGTTGCGCCAAGCGGACAGCGCACACAGTTGGAC 1041
                       * *  ****  ** *  **  ***  ***        ***     *    *   *****

consensus_5099#0      GAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAAT 1140
consensus_5099#2      GAAACAAGAGGTATAGACGTGTTGGGTAACATTCTCGAACGATCGGCCATCTCGATCAAT 159
consensus_5099#1      AACTTCCGCGGCATCGATATATTGGGCAATATCGTTGAAAGCTCGAGCATATCCGTGAAC 1101
                       *     * ** ** **  * ***** ** **  * *** * ***  *** **  * ** 

consensus_5099#0      CGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGAT 1200
consensus_5099#2      CGCAATTTGTACGGTGATGTGCACAATATGGGACATGTGCTGCTGGCTTTCATTCACGAT 219
consensus_5099#1      CGCCAGCTGTACGGCGATACGCACAACAGTGGGCACGTATTGCTTTCGCTCGTGCACGAT 1161
                      *** *  ******* ***  ****** *  ** ** **  ****  *  ** * ******

consensus_5099#0      CCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGG 1260
consensus_5099#2      CCACGCGGAACGTATCTGGAATCGTCCGGAGTGATGGGAGGTGTAGCAACCGCTATGCGG 279
consensus_5099#1      CCGAGGGAAGATTTTCTTGAGAGCTTCGGTGTGATGGGAGATGTGACGACGGCGATGCGT 1221
                      **  * * *   * *** **    * *** ********** ***  * ** ** ***** 

consensus_5099#0      GATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCT 1320
consensus_5099#2      GATCCGATCTTTTATCGCTGGCACAAGTTCATCGACAATATTTTCCTCCGGAACAAAGCT 339
consensus_5099#1      GATCCAGTCTTCTACCGCTGGCACACCTTCGTGGACAGCATTTTCCAGCGCCACAAGCAA 1281
                      *****  **** ** **********  *** * ****  *******  **  ****    

consensus_5099#0      CGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTT 1380
consensus_5099#2      CGTCTCGCTCCGTACACCATGGCCGAACTTTCTAATAGCAACGTAACGCTGGAAGCGCTT 399
consensus_5099#1      CGGTTCGCACCGTACGGGCCGGCCGAATTGAGAAACCCGGGCGTTAACTTGCTGAGCCTG 1341
                      **  **** ******     ******* *    **      *** *   **      ** 

consensus_5099#0      GAAACGCAGCTCGATCGCGCTGGTGGCGCTGTCAACAGTTTTGTAACCTTTTGGCAGCGC 1440
consensus_5099#2      GA---------------------------------------------------------- 401
consensus_5099#1      GAAACGGAGCTAGATCGGCGCGATTCGGTCAAGAACACGTTGCTAACGTTCTGGCAACGT 1401
                      **                                                          

consensus_5099#0      TCGCAAGTTGATCTGCGTGCTGGAATAGACTTTTCTGCAGCGGGCAGTGCCTTCGTTAGC 1500
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TCGCAGTTCGATCTGGGTGCTGGTATAGACTTCGGCGCAGAGGGCAGCGTGTTCGTAACT 1461
                                                                                  

consensus_5099#0      TTCACGCATCTTCAGTGTGCTCCATTCGTTTATCGGCTTCGCATCAATTCAACTGCTCGC 1560
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TTCACTCATCTACAGCACGCCGCATTCAACTATCGGCTGCAGGTTGCCTA---TTCTGGT 1518
                                                                                  

consensus_5099#0      TCAAACAGACAAGACACGGTACGGATCTTTCTCTTGCCGCGCCAAAACGAACAGGGTCGC 1620
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      ACGGCCAAGCCTGCGACACTGCGCATCTTTCTGGCACCGAAGCGTAATGAACGAGGACAA 1578
                                                                                  

consensus_5099#0      CCTTTGTCTTTTGAGGATCGTCGTCTGCTGGCCATCGAGCTGGACAGCTTCCGTGTAAAT 1680
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TCGTTGACGTTTGAAGAGCAACGACGGCTGGCTATCGAGATGGATACATTCCGTGTGAAT 1638
                                                                                  

consensus_5099#0      TTGCGCCCTGGCATGAACAACATCGTACGACAGTCGTCCAACTCGAGCGTTACGATTCCG 1740
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TTAACACCTGGCATTAACAACATCATTCGACGATCGGCAAACTCGAGTGTTACCATCCCA 1698
                                                                                  

consensus_5099#0      TTCGAACGGACCTTTGGTAACGTGGAGCAGGCTAACGCAGGCAATGCACAATCGCGATTC 1800
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TACGAACGCACCTTCCGCAACGTGGCTAACACAAACATTGGTGATGCAAATTTCCGCTTC 1758
                                                                                  

consensus_5099#0      TGTGGTTGCGGTTGGCCGGCACATATGCTACTGCCGAAAGGGAATGCGAACGGCGTCGAG 1860
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TGCGGCTGTGGATGGCCATCGCACATGCTTGTGCCGAAAGGCGATCAGTTCGGTGTGGAG 1818
                                                                                  

consensus_5099#0      TTTGACTTGTTTGCAATGGTCTCGCGGTTTGAAGACGATAACGCTAACGTTAACTACGAT 1920
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      TACGATCTTTTCGCGATGCTGTCCGATCATGAGCAGGACCGGGTGAATCCATTGTTTGAT 1878
                                                                                  

consensus_5099#0      GAGAATGCTGGGTGCGATGATTCTTATGCGTTCTGCGGACTGCGGGATCGCGTTTACCCT 1980
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      GAACGCACGGATTGCAATGATGCACACTCGTTCTGTGGTTTGAGGGATCGTACGTATCCA 1938
                                                                                  

consensus_5099#0      AGCCGTCGTGCGATGGGCTTTCCATTCGATAGAAGAGCATCGAACGGTGTTAGATCAGTG 2040
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      GATGCACGCAACATGGGCTTTCCGTTGGATCGTCGTGTAGCGAACACGGTTCGATCGTTC 1998
                                                                                  

consensus_5099#0      GCAGATTTCGTTGCACCGTACAAAAACATGCGATTGGCGACTGTGACCTTACGTTTCATG 2100
consensus_5099#2      ------------------------------------------------------------
consensus_5099#1      CAGGATTTCGTTGCGCCTTATCAGAACATGCGTGTCGCGACGATAACGATTCGCTTCACC 2058
                                                                                  

consensus_5099#0      AATACTATTATCGATCGTCC 2120
consensus_5099#2      --------------------
consensus_5099#1      AATACGGTTGTGGA------ 2072
                                          




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)