cluster # 5238

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Anopheles gambiae
cluster # 5238 cluster # 5238 Sequences # 4 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5238#0 length = 1263 sequences # 2

consensus_5238#1 length = 659 sequences # 1
consensus_5238#2 length = 650 sequences # 1

consensusID : consensus_5238#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1263
fasta sequence

                              [CCGCCCACGCGTCCGGTGCCGGCGAAGGACTGGTGCGACGAGCAGGACCTGCCGGAGGAGACGCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAGGACGTGCTGTCAGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGCGACCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGTGCCGGCAAGGCGATGCTGAAGATCTGCGAGCAGAAGGGTGTAGGGGATCAGTTCATTGCGGAGCAGTTCTACAACCTGTCGCAGTTGATGACTGATCCAGTGCCGGAGGTGCGCGATACGTTCGTGAAGAAGCTACACAAAGGCCTGAGCAAGGGCATTCCGCACAAGTGCCTTCCGCTTGATTTCATGGGCTACTATGCGCTCGGCGGAAGAGAAACAGATCAAACTTTGTTCGCTCAAATCAGATCAAACATAGAGACAGACGTCAACAGACGACGAGAGTACGTGAAAAACTTCACCACAGTTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTTTGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCCCAAACGATCCGGCCCAGCTGCGACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCACTCGTCATGAACAAGGAGTTCTTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCACAAGGACGCCCTCAAGCCCGAGGACGAGGAAACGAATCACAAACTGTGGGCCATTTGTGATGTCGCGATGGGGCTCATACTCACCCGTCTAACGTTCTACGATATGCGGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTACTTCCAGGCCCAGCCGGAAGACTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACTTAACGGATCGGAGCGGTCGCAGTGCGGTCCCGTCAGGCTCGAAGACACTGGCGCCTGCGGCCAAACCCAAACCCCAAGCCCCGACCACTTCCGCATCCGCTTCGTCCTCGTCATCCAGCGCGACAGCCTGCGCGTCCTCCTCTTCATCGCTTACACTGCCGGTCACATCTAGTTCGTCAGCGATGGAACGGAACAAACTCAAAACGAAATTCGCTCGCCAAGCAGTTCACGACGATGACGAACACAACAATGGGCAGGACGAGGGAGAAGATACCGGTCCACCACCC]

[+] EMBL BM610502             [CCGCCCACGCGTCCGGTGCCGGCGAAGGACTGGTGCGACGAGCAGGACCTGCCGGAGGAGACGCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAGGACGTGCTGTCAGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGCGACCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGTGCCGGCAAGGCGATGCTGAAGATCTGCGAGCAGAAGGGTGTAGGGGATCAGTTCATTGCGGAGCAGTTCTACAACCTGTCGCAGTTGATGACTGATCCAGTGCCGGAGGTGCGCGATACGTTCGTGAAGAAGCTACACAAAGGCCTGAGCAAGGGCATTCCGCACAAGTGCCTTCCGCTTGATTTCATGGGCTACTATGCGCTCGGCGGAAGAGAAACAGATCAAACTTTGTTCGCTCAAATCAGATCAAACATAGAGACAGACGTCAACAGACGACGAGAGTACGTGAAAAACTTCACCACAGTTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTTTGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCCCAAACGATCCGGCCCAGCTGCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM605596             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgATTCTACCGGACTATATGCTCGTGTTTGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCCCAAACGATCCGGCCCAGCTGCGACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCACTCGTCATGAACAAGGAGTTCTTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCACAAGGACGCCCTCAAGCCCGAGGACGAGGAAACGAATCACAAACTGTGGGCCATTTGTGATGTCGCGATGGGGCTCATACTCACCCGTCTAACGTTCTACGATATGCGGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTACTTCCAGGCCCAGCCGGAAGACTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACTTAACGGATCGGAGCGGTCGCAGTGCGGTCCCGTCAGGCTCGAAGACACTGGCGCCTGCGGCCAAACCCAAACCCCAAGCCCCGACCACTTCCGCATCCGCTTCGTCCTCGTCATCCAGCGCGACAGCCTGCGCGTCCTCCTCTTCATCGCTTACACTGCCGGTCACATCTAGTTCGTCAGCGATGGAACGGAACAAACTCAAAACGAAATTCGCTCGCCAAGCAGTTCACGACGATGACGAACACAACAATGGGCAGGACGAGGGAGAAGATACCGGTCCACCACCC]




>consensus_5238#0
CCGCCCACGCGTCCGGTGCCGGCGAAGGACTGGTGCGACGAGCAGGACCTGCCGGAGGAG
ACGCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAG
GACGTGCTGTCAGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGC
GACCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGT
GCCGGCAAGGCGATGCTGAAGATCTGCGAGCAGAAGGGTGTAGGGGATCAGTTCATTGCG
GAGCAGTTCTACAACCTGTCGCAGTTGATGACTGATCCAGTGCCGGAGGTGCGCGATACG
TTCGTGAAGAAGCTACACAAAGGCCTGAGCAAGGGCATTCCGCACAAGTGCCTTCCGCTT
GATTTCATGGGCTACTATGCGCTCGGCGGAAGAGAAACAGATCAAACTTTGTTCGCTCAA
ATCAGATCAAACATAGAGACAGACGTCAACAGACGACGAGAGTACGTGAAAAACTTCACC
ACAGTTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTTT
GCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCCCAAACGATCCGGCCCAGCTG
CGACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCACTCGTCATGAACAAGGAGTTC
TTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCACAAGGACGCCCTC
AAGCCCGAGGACGAGGAAACGAATCACAAACTGTGGGCCATTTGTGATGTCGCGATGGGG
CTCATACTCACCCGTCTAACGTTCTACGATATGCGGGAAGCACCGGCCGAGGCACGCATA
CCGTCGATGTACTTCCAGGCCCAGCCGGAAGACTTCCAAAACACGCGCTACTACATTCCC
GATGACATGTACAACTTAACGGATCGGAGCGGTCGCAGTGCGGTCCCGTCAGGCTCGAAG
ACACTGGCGCCTGCGGCCAAACCCAAACCCCAAGCCCCGACCACTTCCGCATCCGCTTCG
TCCTCGTCATCCAGCGCGACAGCCTGCGCGTCCTCCTCTTCATCGCTTACACTGCCGGTC
ACATCTAGTTCGTCAGCGATGGAACGGAACAAACTCAAAACGAAATTCGCTCGCCAAGCA
GTTCACGACGATGACGAACACAACAATGGGCAGGACGAGGGAGAAGATACCGGTCCACCA
CCC

consensusID : consensus_5238#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence

                              [CCGGCCGTACGTGCTGAAGGCGTTCACGTACCTTGGCCGCTACAAGTCACTGATCGAGTCGCACCCGGCCATCCTGAAGGAGTTGGCCCCGCTCTGCAAAGAGTTTGCGATCGCAGGCACACCGAAGCAGGCGAAGCACGCGATCCGCTGTATGTTCGTAAACACGCAGACGGGCAACAGCGCTGCCGTGGATCCGCTAGCGACGGGTGCGCCCGGATCGGACCTCAGCGCGATCGACATCTTCCCGGACATTGTCGAGGGCATGAAGCAAACGTTGCACCCGCAGAGCGAACACTACCGCACGGCGATCGTGACGCTCGGGCACATCGCGTACAATCTGCCGGACAAGTTCCACGTGCAGATCAAGAACATTATCTCGCGCAAGATCGTGAAGGAGCTGCTGGTGAAGGAAACGTCGGACGGGCGGTCGAACGTGCCGGCGAAGGACTGGTGCGACGAGCAGGATCTGCCGGAGGAGACGCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAGGACGTGCTGTCGGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGCGACCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGTG]

[+] EMBL BM581214             [CCGGCCGTACGTGCTGAAGGCGTTCACGTACCTTGGCCGCTACAAGTCACTGATCGAGTCGCACCCGGCCATCCTGAAGGAGTTGGCCCCGCTCTGCAAAGAGTTTGCGATCGCAGGCACACCGAAGCAGGCGAAGCACGCGATCCGCTGTATGTTCGTAAACACGCAGACGGGCAACAGCGCTGCCGTGGATCCGCTAGCGACGGGTGCGCCCGGATCGGACCTCAGCGCGATCGACATCTTCCCGGACATTGTCGAGGGCATGAAGCAAACGTTGCACCCGCAGAGCGAACACTACCGCACGGCGATCGTGACGCTCGGGCACATCGCGTACAATCTGCCGGACAAGTTCCACGTGCAGATCAAGAACATTATCTCGCGCAAGATCGTGAAGGAGCTGCTGGTGAAGGAAACGTCGGACGGGCGGTCGAACGTGCCGGCGAAGGACTGGTGCGACGAGCAGGATCTGCCGGAGGAGACGCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAGGACGTGCTGTCGGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGCGACCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGTG]




>consensus_5238#1
CCGGCCGTACGTGCTGAAGGCGTTCACGTACCTTGGCCGCTACAAGTCACTGATCGAGTC
GCACCCGGCCATCCTGAAGGAGTTGGCCCCGCTCTGCAAAGAGTTTGCGATCGCAGGCAC
ACCGAAGCAGGCGAAGCACGCGATCCGCTGTATGTTCGTAAACACGCAGACGGGCAACAG
CGCTGCCGTGGATCCGCTAGCGACGGGTGCGCCCGGATCGGACCTCAGCGCGATCGACAT
CTTCCCGGACATTGTCGAGGGCATGAAGCAAACGTTGCACCCGCAGAGCGAACACTACCG
CACGGCGATCGTGACGCTCGGGCACATCGCGTACAATCTGCCGGACAAGTTCCACGTGCA
GATCAAGAACATTATCTCGCGCAAGATCGTGAAGGAGCTGCTGGTGAAGGAAACGTCGGA
CGGGCGGTCGAACGTGCCGGCGAAGGACTGGTGCGACGAGCAGGATCTGCCGGAGGAGAC
GCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAGGA
CGTGCTGTCGGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGCGA
CCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGTG

consensusID : consensus_5238#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence

                              [CAGAATCCCCGAGGTTNAGTGAAAAACTTCACCACAGCTTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTTTGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCCCAAACGATCCGGCCCAGCTGCGACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCACATCGTCATGAACAACGGAGTTCTTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCGAGGAAGGACGCCCTCAAGCCCGAGGACGGAGGAAACTGAATCACAAACTGTGGGCCATATTGTGATTGTCGCGATGGGGCTCATACTCACCCGTACTAACGTTCTACGATATGCGGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTACATTCCAGGNCCAGCCGGAAGACTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACTTAACGGATCGGAGCGGTCAGCCAGTGCGGTACCCGTACGGCTCGAAGGACACTGGCGCTGCGGCAAAACCAAAGACCCAAGCCCCAGACAGTTTCCAANATACGATTCNGTACCTCGTCATNCAGNAGCGACAGNCCTGAGCGGTACCTCCTCTTCCATCCGCTTACACT]

[+] EMBL AL696420             [CAGAATCCCCGAGGTTNAGTGAAAAACTTCACCACAGCTTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTTTGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCCCAAACGATCCGGCCCAGCTGCGACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCACATCGTCATGAACAACGGAGTTCTTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCGAGGAAGGACGCCCTCAAGCCCGAGGACGGAGGAAACTGAATCACAAACTGTGGGCCATATTGTGATTGTCGCGATGGGGCTCATACTCACCCGTACTAACGTTCTACGATATGCGGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTACATTCCAGGNCCAGCCGGAAGACTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACTTAACGGATCGGAGCGGTCAGCCAGTGCGGTACCCGTACGGCTCGAAGGACACTGGCGCTGCGGCAAAACCAAAGACCCAAGCCCCAGACAGTTTCCAANATACGATTCNGTACCTCGTCATNCAGNAGCGACAGNCCTGAGCGGTACCTCCTCTTCCATCCGCTTACACT]




>consensus_5238#2
CAGAATCCCCGAGGTTNAGTGAAAAACTTCACCACAGCTTGAGCGTGGCATGAGTCAGCT
GCCGCACATTCTACCGGACTATATGCTCGTGTTTGCCGTGACGGTTCTGACGCACGATCC
TCATTTTACGCGCCCAAACGATCCGGCCCAGCTGCGACAGATAGAACGGTGCCTGTGGCT
CGTACTGGAACCACATCGTCATGAACAACGGAGTTCTTCTGCTTTAGCTTCTACAAAAAT
TTGATCGAACGTATTAAACACCGAGGAAGGACGCCCTCAAGCCCGAGGACGGAGGAAACT
GAATCACAAACTGTGGGCCATATTGTGATTGTCGCGATGGGGCTCATACTCACCCGTACT
AACGTTCTACGATATGCGGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTACATTCC
AGGNCCAGCCGGAAGACTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACT
TAACGGATCGGAGCGGTCAGCCAGTGCGGTACCCGTACGGCTCGAAGGACACTGGCGCTG
CGGCAAAACCAAAGACCCAAGCCCCAGACAGTTTCCAANATACGATTCNGTACCTCGTCA
TNCAGNAGCGACAGNCCTGAGCGGTACCTCCTCTTCCATCCGCTTACACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5238#0      CCGCCCACGCGTCCGGTGCCGGCGAAGGACTGGTGCGACGAGCAGGACCTGCCGGAGGAG 60
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      ACGCGCTGCAAGGTGGAGGGGCTGAAGACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAG 120
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      GACGTGCTGTCAGCGCAGAAGACGTTCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGC 180
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      GACCTGCTCGAGCAGGGCGGCGCACTGTCCGCGGCGGAAAAGTCGTGGCTCCGCCTCAGT 240
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      GCCGGCAAGGCGATGCTGAAGATCTGCGAGCAGAAGGGTGTAGGGGATCAGTTCATTGCG 300
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      GAGCAGTTCTACAACCTGTCGCAGTTGATGACTGATCCAGTGCCGGAGGTGCGCGATACG 360
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      TTCGTGAAGAAGCTACACAAAGGCCTGAGCAAGGGCATTCCGCACAAGTGCCTTCCGCTT 420
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      GATTTCATGGGCTACTATGCGCTCGGCGGAAGAGAAACAGATCAAACTTTGTTCGCTCAA 480
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      ATCAGATCAAACATAGAGACAGACGTCAACAGACGACGAGAGTACGTGAAAAACTTCACC 540
consensus_5238#2      ---------------------------CAGAATCCCCGAGGTTNAGTGAAAAACTTCACC 33
consensus_5238#1      ----------------------CCGGCCGTACGTGCTGAAGGCGTTCACGTACCTTGGCC 38
                                                    *      **            * ***  **

consensus_5238#0      ACAG-TTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTT 599
consensus_5238#2      ACAGCTTGAGCGTGGCATGAGTCAGCTGCCGCACATTCTACCGGACTATATGCTCGTGTT 93
consensus_5238#1      GCTA-CAAGTCACTGATCGAGTC-GCACCCGGCCATCCTGAAGGA--GTTGGCCCCGCTC 94
                       *        *   *   ***** **  ***  *** **   ***   *  ** *   * 

consensus_5238#0      TGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCC-CAAACGATCCGGCCCAGC 658
consensus_5238#2      TGCCGTGACGGTTCTGACGCACGATCCTCATTTTACGCGCC-CAAACGATCCGGCCCAGC 152
consensus_5238#1      TGCAAAGAGTTTGCGATCGCAGGCACACCGAAGCAGGCGAAGCACGCGATCCGCTGTATG 154
                      ***   **   * *   **** *  *  *     * ***   **  *******    *  

consensus_5238#0      TGCG---ACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCAC-TCGTCATGAACAA- 713
consensus_5238#2      TGCG---ACAGATAGAACGGTGCCTGTGGCTCGTACTGGAACCACATCGTCATGAACAAC 209
consensus_5238#1      TTCGTAAACACGCAGACGGGCAACAGCG--CTGCCGTGGATCCGC-TAGCGACGGGTGC- 210
                      * **   ***   ***  **   * * *    *   **** ** * * *  * *      

consensus_5238#0      GGAGTTCTTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCAC--AAG 771
consensus_5238#2      GGAGTTCTTCTGCTTTAGCTTCTACAAAAATTTGATCGAACGTATTAAACACCGAGGAAG 269
consensus_5238#1      -GCCCGGATCGGACCTCAGCGCGATCGACATCTTCCCGGACATTGTCGAGGGCATG-AAG 268
                       *      ** *   *     * *   * ** *   ** ** *  *  *   *    ***

consensus_5238#0      GACGCCCTCAAGCCCGAGGACG-AGGAAAC-GAATCACAA-----ACTGTGGGCCAT-TT 823
consensus_5238#2      GACGCCCTCAAGCCCGAGGACGGAGGAAACTGAATCACAA-----ACTGTGGGCCATATT 324
consensus_5238#1      CAAACGTTGCACCCGCAGAGCGAACACTACCGCACGGCGATCGTGACGCTCGGGCACATC 328
                       *  *  *  * **  **  ** *    ** * *   * *     **  * ** **  * 

consensus_5238#0      GTG----AT-GTCGCGATGGGGCTCATACTCA--CCCGT-CTAACGTTCTACGATATG-C 874
consensus_5238#2      GTG----ATTGTCGCGATGGGGCTCATACTCA--CCCGTACTAACGTTCTACGATATG-C 377
consensus_5238#1      GCGTACAATCTGCCGGACAAGTTCCACGTGCAGATCAAGAACATTATCTCGCGCAAGATC 388
                      * *    **   *  **   *   **    **   *      *   *    **  *   *

consensus_5238#0      GGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTAC-TTCCAG-GCCCAGCCGGAAGA 932
consensus_5238#2      GGGAAGCACCGGCCGAGGCACGCATACCGTCGATGTACATTCCAG-GNCCAGCCGGAAGA 436
consensus_5238#1      GTGAAGGAGCTGCTGGTG-AAGGAAACGTCGGACGGGCGGTCGAACGTGCCGGCGAAGGA 447
                      * **** * * ** *  * * * * **    ** *  *  ** *  *  * * ** * **

consensus_5238#0      CTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACTTAACGGATCGGAGCGG 992
consensus_5238#2      CTTCCAAAACACGCGCTACTACATTCCCGATGACATGTACAACTTAACGGATCGGAGCGG 496
consensus_5238#1      CTGGTGCGACGAGC---AGGATCTGCCGGAGGAGACGCGCTGCAAGGTGGAGGGGCTGAA 504
                      **      **  **   *  *  * ** ** ** * *  *  *     ***  **     

consensus_5238#0      TCG--CAGTGCGGT-CCCGTCAGGCTCGAAG-ACACTGGCGCCTGCGGCCAAACCCAAAC 1048
consensus_5238#2      TCAGCCAGTGCGGTACCCGTACGGCTCGAAGGACACTGGCGC-TGCGGCAAAACCAAAGA 555
consensus_5238#1      GACGATGGCCCGCTGGCTGCTCGGGCTGAAGAAGGACG-TGCTGTCGGCGCAGAAGACGT 563
                             *  ** *  * *   **   **** *    *  **   ****  *    *   

consensus_5238#0      CCCAAGCCCCGACCACTTCC--GCATCCGCTTCGT--CCTCGTCATCCAGC---GCG-AC 1100
consensus_5238#2      CCCAAGCCCCAGACAGTTTCCAANATACGATTCNGTACCTCGTCATNCAGNA--GCG-AC 612
consensus_5238#1      TCCGCATGCTGAACGCGTTCATCAGCAAGAAGGGCGACCTGCTCGAGCAGGGCGGCGCAC 623
                       **     *    *   * *        *        ***  **   ***    *** **

consensus_5238#0      AGCCT---GCGCGTCCTCCTCTTCA--TCGCTTACACTGCCGGTCACATCTAGTTCGTCA 1155
consensus_5238#2      AGNCCTGAGCGGTACCTCCTCTTCCATCCGCTTACACT---------------------- 650
consensus_5238#1      TGTCCGCGGCGGAAAAGTCGTGGCT--CCGCCT-CAGTG--------------------- 659
                       * *    ***       *    *    *** * ** *                      

consensus_5238#0      GCGATGGAACGGAACAAACTCAAAACGAAATTCGCTCGCCAAGCAGTTCACGACGATGAC 1215
consensus_5238#2      ------------------------------------------------------------
consensus_5238#1      ------------------------------------------------------------
                                                                                  

consensus_5238#0      GAACACAACAATGGGCAGGACGAGGGAGAAGATACCGGTCCACCACCC 1263
consensus_5238#2      ------------------------------------------------
consensus_5238#1      ------------------------------------------------