cluster # 527

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Anopheles gambiae
cluster # 527 cluster # 527 Sequences # 2 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_527#0 length = 306 sequences # 1

consensus_527#1 length = 104 sequences # 1

consensusID : consensus_527#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 306
fasta sequence

                              [CGTCGGCCTGATGAAGGATCCGCCACTGCCACGCAACGGGCCAACCAACTTTATCCAGCCAACGCAGCAACAGGGCGCAGTGATGATGGTTTACGGACTCGACAATGGAACCGCCAACACCGATAAGCTTTTCAATCTGTTCTGCCTGTACGGCAACGTGGTGCGGATAAAGTTCCTGAAGACAAAGGAAGGCACCGCCATGGTCCAGATGGGTGACGCCATCGCAGTCGAACGTTGCGTCCAGCACCTGAACAACATTCCAATCGGAAATGATGGCAAAATTCAGATCGCATTTTCCAAGCAAAA]

[+] EMBL AGA280134            [CGTCGGCCTGATGAAGGATCCGCCACTGCCACGCAACGGGCCAACCAACTTTATCCAGCCAACGCAGCAACAGGGCGCAGTGATGATGGTTTACGGACTCGACAATGGAACCGCCAACACCGATAAGCTTTTCAATCTGTTCTGCCTGTACGGCAACGTGGTGCGGATAAAGTTCCTGAAGACAAAGGAAGGCACCGCCATGGTCCAGATGGGTGACGCCATCGCAGTCGAACGTTGCGTCCAGCACCTGAACAACATTCCAATCGGAAATGATGGCAAAATTCAGATCGCATTTTCCAAGCAAAA]




>consensus_527#0
CGTCGGCCTGATGAAGGATCCGCCACTGCCACGCAACGGGCCAACCAACTTTATCCAGCC
AACGCAGCAACAGGGCGCAGTGATGATGGTTTACGGACTCGACAATGGAACCGCCAACAC
CGATAAGCTTTTCAATCTGTTCTGCCTGTACGGCAACGTGGTGCGGATAAAGTTCCTGAA
GACAAAGGAAGGCACCGCCATGGTCCAGATGGGTGACGCCATCGCAGTCGAACGTTGCGT
CCAGCACCTGAACAACATTCCAATCGGAAATGATGGCAAAATTCAGATCGCATTTTCCAA
GCAAAA

consensusID : consensus_527#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 104
fasta sequence

                              [CCGCCCACGCGTCCGGCAGCAACAGGGCGCAGTGATGATGCTGCGTTGGCTGGATAAAGTTGGTTGGCCCGTTGCGTGGCAGCGGTGGATCCTTCATCAGGCCG]

[+] EMBL BM611372             [CCGCCCACGCGTCCGGCAGCAACAGGGCGCAGTGATGATGCTGCGTTGGCTGGATAAAGTTGGTTGGCCCGTTGCGTGGCAGCGGTGGATCCTTCATCAGGCCG]




>consensus_527#1
CCGCCCACGCGTCCGGCAGCAACAGGGCGCAGTGATGATGCTGCGTTGGCTGGATAAAGT
TGGTTGGCCCGTTGCGTGGCAGCGGTGGATCCTTCATCAGGCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_527#0      CGTCGGCCTGATGAAGGATCCGCCACTGCCACGCAACGGGCCAACCAACTTTATCCAGCC 60
consensus_527#1      --------------------------------------------------CCGCCCACGC 10
                                                                           ***  *

consensus_527#0      AAC--GCAGCAACAGGGCGCAGTGATGATGGTTTACGGACTCGACAATGGAACCGCCAAC 118
consensus_527#1      GTCCGGCAGCAACAGGGCGCAGTGATGATGCTGCGTTGGCTGGATAA---AGTTGGTTGG 67
                       *  ************************* *     * ** ** **   *   *     

consensus_527#0      ACCGATAAGCTTTTCAATCTGTTCTGCCTGTACGGCAACGTGGTGCGGATAAAGTTCCTG 178
consensus_527#1      CCCGTTGCGTGGCAGCGGTGGATCCTTCATCAGGCCG----------------------- 104
                      *** *  *           * **   *   * * *                        

consensus_527#0      AAGACAAAGGAAGGCACCGCCATGGTCCAGATGGGTGACGCCATCGCAGTCGAACGTTGC 238
consensus_527#1      ------------------------------------------------------------
                                                                                 

consensus_527#0      GTCCAGCACCTGAACAACATTCCAATCGGAAATGATGGCAAAATTCAGATCGCATTTTCC 298
consensus_527#1      ------------------------------------------------------------
                                                                                 

consensus_527#0      AAGCAAAA 306
consensus_527#1      --------