cluster # 5406

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Anopheles gambiae
cluster # 5406 cluster # 5406 Sequences # 4 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5406#0 length = 949 sequences # 1
consensus_5406#1 length = 733 sequences # 1

consensus_5406#2 length = 662 sequences # 1
consensus_5406#3 length = 465 sequences # 1

consensusID : consensus_5406#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 949
fasta sequence

                              [AGTAAGTTACTTAAAATCCTCCATATCCTAATCAGTGTGAAGTTTCTGTGGTTTATTCCCTCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGCTGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTCTGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTGTGCGTGCTCACCTGGGTAATTTACTCAAGCCTTCAGCACCGACAGCAGTGAAGACACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCGCTTTCGGCGGGTAGTGAATACCAATAATCCACTTTTTGCAACAGAACACAATACGGAAGGAACGCTGCTTCGATGGGGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTTGTGGCTCCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAACCGACGTCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTGAGACGGCCCAAGGTGTCCCACTGACCGTAACCGGAGTGGCACAGTGCAAAATCATGAAGGCCGACGAGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAAAAAACAAGATGACAATCCTGCAAACGCTCGAAGGTCACCTGCGAGCGATTCTTGGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCCCCTGACGTCGGCAGGATGGGCATCGAGATATTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGAACGCTGAT]

[+] EMBL CNS08JHI             [AGTAAGTTACTTAAAATCCTCCATATCCTAATCAGTGTGAAGTTTCTGTGGTTTATTCCCTCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGCTGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTCTGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTGTGCGTGCTCACCTGGGTAATTTACTCAAGCCTTCAGCACCGACAGCAGTGAAGACACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCGCTTTCGGCGGGTAGTGAATACCAATAATCCACTTTTTGCAACAGAACACAATACGGAAGGAACGCTGCTTCGATGGGGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTTGTGGCTCCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAACCGACGTCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTGAGACGGCCCAAGGTGTCCCACTGACCGTAACCGGAGTGGCACAGTGCAAAATCATGAAGGCCGACGAGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAAAAAACAAGATGACAATCCTGCAAACGCTCGAAGGTCACCTGCGAGCGATTCTTGGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCCCCTGACGTCGGCAGGATGGGCATCGAGATATTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGAACGCTGAT]




>consensus_5406#0
AGTAAGTTACTTAAAATCCTCCATATCCTAATCAGTGTGAAGTTTCTGTGGTTTATTCCC
TCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGC
TGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTC
TGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTG
TGCGTGCTCACCTGGGTAATTTACTCAAGCCTTCAGCACCGACAGCAGTGAAGACACATC
GCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCGCTTTCGGCGGGTAGTGAATAC
CAATAATCCACTTTTTGCAACAGAACACAATACGGAAGGAACGCTGCTTCGATGGGGAAT
ATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTTGTGGCTCCACG
AAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAACCGACGTCCAG
CGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTGAGACGGCCCAA
GGTGTCCCACTGACCGTAACCGGAGTGGCACAGTGCAAAATCATGAAGGCCGACGAGCTG
CTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAAAAAACAAGATGACAATCC
TGCAAACGCTCGAAGGTCACCTGCGAGCGATTCTTGGAACGCTTACAGTCGAGGAGGTGT
ACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCCCCTGACGTCGGCA
GGATGGGCATCGAGATATTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACC
TGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGAACGCTGAT

consensusID : consensus_5406#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 733
fasta sequence

                              [TATTCCTCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGCTGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTCTGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTGTGCGTGCTCACCTGGGTAATTTACTCAAGCCTTCAGCACCGACAGCAGTGAAGACACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCGCTTTCGGCGGGTAGTGAATAAAATAATCCACTTTTTGCAACAGAACACAATACGGAAGGAACGCTGCTTCGATGGGGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTTGTGGCTCCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAACCGACGTCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTGAGACGGCCCAAGGTGTCCCACTGACCGTAACCGGAGTGGCACAGTGCAAAATCATGAAGGCCGACGAGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAGGAAATCAAGATGACAATCCTGCAGTCGCTCGGTAAGGCGCAGAGGCCGAGCGTGAAGCGGACCGCTGATGCGGGTGTTGCCGAGGC]

[+] EMBL CNS09J0X             [TATTCCTCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGCTGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTCTGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTGTGCGTGCTCACCTGGGTAATTTACTCAAGCCTTCAGCACCGACAGCAGTGAAGACACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCGCTTTCGGCGGGTAGTGAATAAAATAATCCACTTTTTGCAACAGAACACAATACGGAAGGAACGCTGCTTCGATGGGGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTTGTGGCTCCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAACCGACGTCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTGAGACGGCCCAAGGTGTCCCACTGACCGTAACCGGAGTGGCACAGTGCAAAATCATGAAGGCCGACGAGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAGGAAATCAAGATGACAATCCTGCAGTCGCTCGGTAAGGCGCAGAGGCCGAGCGTGAAGCGGACCGCTGATGCGGGTGTTGCCGAGGC]




>consensus_5406#1
TATTCCTCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATG
TCCTGCTGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTA
TGTGTCTGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTG
GTGGTGTGCGTGCTCACCTGGGTAATTTACTCAAGCCTTCAGCACCGACAGCAGTGAAGA
CACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCGCTTTCGGCGGGTAGT
GAATAAAATAATCCACTTTTTGCAACAGAACACAATACGGAAGGAACGCTGCTTCGATGG
GGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTTGTGGCT
CCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAACCGACG
TCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTGAGACGG
CCCAAGGTGTCCCACTGACCGTAACCGGAGTGGCACAGTGCAAAATCATGAAGGCCGACG
AGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAGGAAATCAAGATGA
CAATCCTGCAGTCGCTCGGTAAGGCGCAGAGGCCGAGCGTGAAGCGGACCGCTGATGCGG
GTGTTGCCGAGGC

consensusID : consensus_5406#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence

                              [CCGCCCACGCGTCCGGTCGTGAGTGTGTCTTCAGAACCGGCTGATAAGTGAACATCGAAAGAGTTTGGTTCGTACCAACGCAAACAAGTGCCTCCAGTCCAGTTAGTTCCGTTCATCAAACACCAGTGCGGTTTACGTATTGCAGCGAGTGCGTCATCGGGTGTTGTGAACGTTGGAAATGTGTTGTCTAAGGTCAAAATGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCACCTGACGTCGGCAGGATGGGCATCGAGATACTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGCGACGCTGATGCGGGTGTTGCCGAGGCTAATCGTGACGCCGGCATACGGGAGGCCGAGTGCGAGAAGAGCGCCATGGACGTCAAGTACTCAACCGACACCAAGATCGAGGACAACGCACGCATGTACAAGCTGCAGAAGGCAAACTTTGATCAGGAAATTAACACGGCGAAAGCAGAATCGCAGCTCGCGTACGAACTGCAGGCTGCCAAAATTCGCCAGCGCATCCGTAACGAGGAAATTCAGATCGATATCGTAAAGCGCCGCAAGCAGATCGAGA]

[+] EMBL BM651293             [CCGCCCACGCGTCCGGTCGTGAGTGTGTCTTCAGAACCGGCTGATAAGTGAACATCGAAAGAGTTTGGTTCGTACCAACGCAAACAAGTGCCTCCAGTCCAGTTAGTTCCGTTCATCAAACACCAGTGCGGTTTACGTATTGCAGCGAGTGCGTCATCGGGTGTTGTGAACGTTGGAAATGTGTTGTCTAAGGTCAAAATGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCACCTGACGTCGGCAGGATGGGCATCGAGATACTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGCGACGCTGATGCGGGTGTTGCCGAGGCTAATCGTGACGCCGGCATACGGGAGGCCGAGTGCGAGAAGAGCGCCATGGACGTCAAGTACTCAACCGACACCAAGATCGAGGACAACGCACGCATGTACAAGCTGCAGAAGGCAAACTTTGATCAGGAAATTAACACGGCGAAAGCAGAATCGCAGCTCGCGTACGAACTGCAGGCTGCCAAAATTCGCCAGCGCATCCGTAACGAGGAAATTCAGATCGATATCGTAAAGCGCCGCAAGCAGATCGAGA]




>consensus_5406#2
CCGCCCACGCGTCCGGTCGTGAGTGTGTCTTCAGAACCGGCTGATAAGTGAACATCGAAA
GAGTTTGGTTCGTACCAACGCAAACAAGTGCCTCCAGTCCAGTTAGTTCCGTTCATCAAA
CACCAGTGCGGTTTACGTATTGCAGCGAGTGCGTCATCGGGTGTTGTGAACGTTGGAAAT
GTGTTGTCTAAGGTCAAAATGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCA
GTTCGCGGCACTGGTGCGCGAGGTCGCGGCACCTGACGTCGGCAGGATGGGCATCGAGAT
ACTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAA
GGCGCAGACGGCGAGCGTGAAGCGCGACGCTGATGCGGGTGTTGCCGAGGCTAATCGTGA
CGCCGGCATACGGGAGGCCGAGTGCGAGAAGAGCGCCATGGACGTCAAGTACTCAACCGA
CACCAAGATCGAGGACAACGCACGCATGTACAAGCTGCAGAAGGCAAACTTTGATCAGGA
AATTAACACGGCGAAAGCAGAATCGCAGCTCGCGTACGAACTGCAGGCTGCCAAAATTCG
CCAGCGCATCCGTAACGAGGAAATTCAGATCGATATCGTAAAGCGCCGCAAGCAGATCGA
GA

consensusID : consensus_5406#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 465
fasta sequence

                              [GGCAGAATCCCCCGAGGTTAAAGTTATACAATCAAAAGCCCTCCACCGATCGCCCTTCCTGTCCAGTGCTTCACAAGTTCTTCCCCGGTTTTTGTACCGAGTGCATTGGACGAGCGTCCAACTATCCGGCACTTTGTTGGAACAGTTTCAACAGTTTCGAGCCAAACAGATGGGTTTCGTCTGGATGGGTATGCTACAGCTGGGCATGATCTTTGGCGCTACGTACGGTATCATCAAAAGGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCCCTGACGTCGGCAGGATGGGCATCGAGATATTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGCGACGCTGACTGCGGGTGTTGCCGAGGCTAATCGTGACGCCG]

[+] EMBL AL932980             [GGCAGAATCCCCCGAGGTTAAAGTTATACAATCAAAAGCCCTCCACCGATCGCCCTTCCTGTCCAGTGCTTCACAAGTTCTTCCCCGGTTTTTGTACCGAGTGCATTGGACGAGCGTCCAACTATCCGGCACTTTGTTGGAACAGTTTCAACAGTTTCGAGCCAAACAGATGGGTTTCGTCTGGATGGGTATGCTACAGCTGGGCATGATCTTTGGCGCTACGTACGGTATCATCAAAAGGAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCCCTGACGTCGGCAGGATGGGCATCGAGATATTGTCCTTTACGATCAAGGACGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGCGACGCTGACTGCGGGTGTTGCCGAGGCTAATCGTGACGCCG]




>consensus_5406#3
GGCAGAATCCCCCGAGGTTAAAGTTATACAATCAAAAGCCCTCCACCGATCGCCCTTCCT
GTCCAGTGCTTCACAAGTTCTTCCCCGGTTTTTGTACCGAGTGCATTGGACGAGCGTCCA
ACTATCCGGCACTTTGTTGGAACAGTTTCAACAGTTTCGAGCCAAACAGATGGGTTTCGT
CTGGATGGGTATGCTACAGCTGGGCATGATCTTTGGCGCTACGTACGGTATCATCAAAAG
GAACGCTTACAGTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCG
AGGTCGCGGCCCTGACGTCGGCAGGATGGGCATCGAGATATTGTCCTTTACGATCAAGGA
CGTGTACGACGATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAA
GCGCGACGCTGACTGCGGGTGTTGCCGAGGCTAATCGTGACGCCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5406#2      ------------------------------------------------------------
consensus_5406#3      ----------------------------------------------------------GG 2
consensus_5406#0      AGTAAGTTACTTAAAATCCTCCATATCCTAATCAGTGTGAAGTTTCTGTGGTTTATTCCC 60
consensus_5406#1      -----------------------------------------------------TATTCC- 6
                                                                                  

consensus_5406#2      -------------------------------------------CCGCCCACGCGTCCGGT 17
consensus_5406#3      CAGAATCCCCCGAGGTTAAAGTTATACAATCAAAAGCCCTCCACCGATCGCCCTTCCTGT 62
consensus_5406#0      TCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGC 120
consensus_5406#1      TCCCTGTTAGTGCATCGAAGGTCTGCCCGGCGGCCAATGGTGGCTTTGTGAATGTCCTGC 66
                                                                 *          *** * 

consensus_5406#2      CGTGAGTGTGTCTTCAGAACCGGCTGATAAGTGAACATCGA-AAGAGTTTGGTTCGTACC 76
consensus_5406#3      CC--AGTGCTTCACAAGTTCTTCCCCG-GTTTTTGTACCGA-GTGCATTGGACGAGCGTC 118
consensus_5406#0      TGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTC 180
consensus_5406#1      TGTGTGAAGAGTGAGTGAGCAAGAGAGAAAGTGAAAATTAGTGTGAGTGTACTATGTGTC 126
                           *          *  *           *    *       *  *       *   *

consensus_5406#2      AACGCAAACAAGTGCCTCCAGTCCAGTTAGTTCCGTTCATCAAACACCAGT---GCGGTT 133
consensus_5406#3      CA-ACTATCCGGCACTTT--GTTGGAACAGTTTCAACAGTTTCGAGCCAAACAGATGGGT 175
consensus_5406#0      TGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTG 240
consensus_5406#1      TGTGTGCGTGTGCGCGTCGATGGCACTAAGTTGTGTTTAACACGTGCGTTCTTGGTGGTG 186
                                 *  * *           ****              *         **  

consensus_5406#2      TACGTATTGCAGCGAGTGCGTCATCGGGTGTTGTGAACGTTGGAAATGTGTTGTCTAAGG 193
consensus_5406#3      TTCGTCTGG--ATGGGTATGCTACAGCTGGGCATGATCTTTGGCGCTACGTACGGTATCA 233
consensus_5406#0      TGCGTGCTCACCTGGGTAATTTACT-CAAGCCTTCAGCACCGACA----GCAGTGAAGAC 295
consensus_5406#1      TGCGTGCTCACCTGGGTAATTTACT-CAAGCCTTCAGCACCGACA----GCAGTGAAGAC 241
                      * ***        * **     *      *   * * *   *       *      *   

consensus_5406#2      TCAAAATGAACGCTTACAGTCGAGGAGG-TGTACAAAGACCGCGACCAGTTCGCGGCACT 252
consensus_5406#3      TCAAAAGGAACGCTTACAGTCGAGGAGG-TGTACAAAGACCGCGACCAGTTCGCGGCACT 292
consensus_5406#0      ACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCG--CTTTCGGCGGG--T 351
consensus_5406#1      ACATCGCTAGTGTCACGAATTGAGAAATCTGTACACTAAGTGCG--CTTTCGGCGGG--T 297
                       **     *  *     * * *** *   ******   *  ***  *  *  ****   *

consensus_5406#2      GGTGCGCGAGGTCGCGGCACCTGACGTCGGCAGGATG-GGCATCGAGATACTGTCCTTTA 311
consensus_5406#3      GGTGCGCGAGGTCGCGGC-CCTGACGTCGGCAGGATG-GGCATCGAGATATTGTCCTTTA 350
consensus_5406#0      AGTGAATACCAATAATCCACTTTTTG-CAACAGAACACAATACGGAAGGAACGCTGCTT- 409
consensus_5406#1      AGTGAATAA-AATAATCCACTTTTTG-CAACAGAACACAATACGGAAGGAACGCTGCTT- 354
                       ***             * * *   * *  *** *      *  **   *  *    ** 

consensus_5406#2      CGATCAAGGACGTGTACGACGATGTCCAGTACCTG-CAGTCGCTCGGTAAGGCGCAGACG 370
consensus_5406#3      CGATCAAGGACGTGTACGACGATGTCCAGTACCTG-CAGTCGCTCGGTAAGGCGCAGACG 409
consensus_5406#0      CGATGGGGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTT 469
consensus_5406#1      CGATGGGGAATATTCACACCGTTGGACCGAACGAGGCCCTCATCGTATCAGGTGGTTGTT 414
                      ****   * *  *  **  ** **  * * **  * *  **      * *** *      

consensus_5406#2      GCGAGCGT-----GAAGCGCGACGCTGA-TGCGGGTGTTGCCGAGGCTAATCGT--GACG 422
consensus_5406#3      GCGAGCGT-----GAAGCGCGACGCTGACTGCGGGTGTTGCCGAGGCTAATCGT--GACG 462
consensus_5406#0      GTGGCTCCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAA 529
consensus_5406#1      GTGGCTCCACGAAGAAACGTACCATTGTCGGCGGTTGGGCATGGGCCTGGTGGTTGGTAA 474
                      * *          *** **   *  **   **** **     * * **  * **  *   

consensus_5406#2      CCGGCATACGGGAGGCCGAGTGCGAGAAGAGCGCCATGGACGTCAAGTACTCAACCGACA 482
consensus_5406#3      CCG--------------------------------------------------------- 465
consensus_5406#0      CCGACGTCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTG 589
consensus_5406#1      CCGACGTCCAGCGCCTCTCGCTGGAGGTGATGACGCTGAATCCCATGTGCGAAATGGTTG 534
                      ***                                                         

consensus_5406#2      CCAAGATCGAGGACAACGCACGCATGTACAAGCTGCAGAAGGCAAACTTTGATCAGGAAA 542
consensus_5406#3      ------------------------------------------------------------
consensus_5406#0      AGACGGCCCAAGGTGTCCCACTGAC-CGTAACCGGAGTGGCACAGTGCAAAATCATGAAG 648
consensus_5406#1      AGACGGCCCAAGGTGTCCCACTGAC-CGTAACCGGAGTGGCACAGTGCAAAATCATGAAG 593
                                                                                  

consensus_5406#2      TTAACACGGCGAAAGCAGAATCGCAGCTCGCGTACGAACTGCAGGCTGCCAAAATTCGCC 602
consensus_5406#3      ------------------------------------------------------------
consensus_5406#0      GCCGACGAGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAAAAAA-C 707
consensus_5406#1      GCCGACGAGCTGCTTGGCACGGCGAGCGAGCAATTTTTGGGCAAATCGGTAAAGGAAATC 653
                                                                                  

consensus_5406#2      AGCGCATCCGTAACGAGGAAATTCAGATCGATATCGTAAAGCGCCGCAAGCAGATCGAGA 662
consensus_5406#3      ------------------------------------------------------------
consensus_5406#0      AAGATGACAATCCTGCAAACGCTCGAAGGTCACCTGCGAGCGATTCTTGGAACGCTTACA 767
consensus_5406#1      AAGATGACAATCCTGCAGTCGCTCGGTAAGGCGCAGAGGCCGAGCGTGAAGCGGACCGCT 713
                                                                                  

consensus_5406#2      ------------------------------------------------------------
consensus_5406#3      ------------------------------------------------------------
consensus_5406#0      GTCGAGGAGGTGTACAAAGACCGCGACCAGTTCGCGGCACTGGTGCGCGAGGTCGCGGCC 827
consensus_5406#1      GATGCGGGTGT-TGCCGAGGC--------------------------------------- 733
                                                                                  

consensus_5406#2      ------------------------------------------------------------
consensus_5406#3      ------------------------------------------------------------
consensus_5406#0      CCTGACGTCGGCAGGATGGGCATCGAGATATTGTCCTTTACGATCAAGGACGTGTACGAC 887
consensus_5406#1      ------------------------------------------------------------
                                                                                  

consensus_5406#2      ------------------------------------------------------------
consensus_5406#3      ------------------------------------------------------------
consensus_5406#0      GATGTCCAGTACCTGCAGTCGCTCGGTAAGGCGCAGACGGCGAGCGTGAAGCGAACGCTG 947
consensus_5406#1      ------------------------------------------------------------
                                                                                  

consensus_5406#2      --
consensus_5406#3      --
consensus_5406#0      AT 949
consensus_5406#1      --