cluster # 5421

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Anopheles gambiae
cluster # 5421 cluster # 5421 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5421#0 length = 772 sequences # 4

consensusID : consensus_5421#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 772
fasta sequence

                              [CCGAGGGTTATGACTCGTGCGAAAGAGGACNTGTGTGCGCTCTTGTGTGATGTGCGGAAAAAGCTTTCCAACCGTGCCTAGTAGCATCATAGATCCTTTTTCTTTAGTTTTATAATTTTTGGTCGCCACATTTTGGGGGAATCCGGGAGGAGAGCGTGCAATAAAGCGTGAACGAAAGAGCGAGAGACAGAGAGGGAAGGAGAGAAGAACACACACACAGAAACTGCGTGCGGGGGTGTGCTGTTAAATTGAAGCAAAGCAAAGGC-CCCACCGAAAACCGAACGGTGGTGGGCACGTACTTTCGCGTGCC--TGTGTGTGTGTGTATGTATGTGAGTGT-T-TGT-GTGTGCGTGCATGCCGGACCCGTTCTGGCCAAGTTGATGCCCACTACTGT-T-TCCCCCGCCCCCACCACTCCCCAATCCCACTAATGCTGGCTTGTGT-GT--TGGTGGAAAAATCGCGTGATGATGAGCGCCGCCGTACCAAAT-TGGTGTCCGGATTTTTGGAAAATAGCAGCCTAGCCGTGCAGCCG-TGAT-TGTGCG-TTAACCACCCTCCCATCCATT-TTCCAACCCTCATCACCCCGCTGTATTCGGGAAACGGAGTGTGCGTGAGAGCGAGAGAGAGCGAAGAAAAGGAAGAAGAATAATTTCCGTGGAGGAAAAGGAAATTTGACGGAGCAAGCAACAATAGGCTGGATTGCTTTGGAAAGAGTGAACGAGACAGACAGAGAGTGTCATTGTGTGTGTGTGTTTGCGCGTAAGCAAGCGGTCAAGAACAG]

[+] EMBL AL933508             [CCGAGGGTTATGACTCGTGCGAAAGAGGACNTGTGTGCGCTCTTGTGTGATGTGCGGAAAAAGCTTTCCAACCGTGCCTAGTAGCATCATAGATCCTTTTTCTTTAGTTTTATAATATTTGGTCGCCACATTTTGGGGGAATCCGGGAGGAGAGCGTGCAATAAAGCGTGAACGAAAGAGCGAGAGACAGAGAGGGAAGGAGAGAAGAACACACACACAGAAACTGCGTGCGGGGGTGTGCTGTTAAATTGAAGCAAAGCAAAGGCGCCCNACGAAAACCGAACGGTGGTGGGCACGTACTTTCGCGTGCC  TGTGTGTGTGTGTATGTATGTGAGTGTNTATGTNGTGTGCGTGCATGCCGGACCCGTTCTGGCCAAGTTGATGCCCACTACTGTATNTCCCCCGGCCCCACCACTCCCCAATCCCACTAATGCTGGCTTGTGTAGTANAGGTGGAAAAATCGCGTGATGATGAGCGCCGCCGTACCAAATATGGTGTCCGGATTTATGGAAAATAGCAG CTAGCCGTGCAGCCGCTGATATGTGCGCTTAACCACCCTCCCATCCATTCTACCAACCCTCATCACCCCGCTGTATTCGGGAAACGGAGTGTG                                                                                                                                                                            ]
[+] EMBL BX628522             [             ggCGTGCGAAAGAGGACGTGTGTGCGCTCTTGTGTGATGTGCGGAAAAAGCTTTCCAACCGTGCCTAGTAGCATCATAGATCCTTTTTCTTTAGTTTTATAATTTTTGGTCGCCACATTTTGGGGGAATCCGGGAGGAGAGCGTGCAATAAAGCGTGAACGAAAGAGCGAGAGACAGAGAGGGAAGGAGAGAAGAACACACACACAGAAACTGCGTGCGGGGGTGTGCTGTTAAATTGAAGCAAAGCAAAGGC CCCACCGAAAACCGAACGGTGGTGGGCACGTACTTTCGCGTGCC  TGTGTGTGTGTGTATGTATGTGAGTGT T TGT GTGTGCGTGCATGCCGGACCCGTTCTGGCCAAGTTGATGCCCACTACTGT T TCCCCCGCCCCCACCACTCCCCAATCCCACTAATGCTGGCTTGTGT GT  TGGTGGAAAAATCGCGTGATGATGAGCGCCGCCGTACCAAAT TGGTGTCCGGATTTTTGGAAAATAGCAGCCTAGCCGTGCAGCCG TGAT TGTGCG TTAACCACCCTCCCATCCATT CTCCAACCCTCA                                                                                                                                                                                                           ]
[+] EMBL BX609372             [                                                GATGTGCGGAAAAAGCTTTCCAACCGTGTCTAGTAGCATCATAGATCCTTTTTCTTTAGTTTTATAATTTTTGGTCGCCACATTTTGGGGGAAACCGGGAGGAGAGCGTGCAATAAAGCGTGAACGAAAGAGCGAGATACAGAGAGGGAAGGAGAGAAGAACACACACACAGAAACTGCGTGCGGGGGTGTGCTGTTAAATTGAAGCATAGCAAAGGC CCCACCGAAAACCGAACGGTGGTGGGCACGTACTTGCGCGTGCCTGTGTGTGTGTGTGTATGTATGTGAGTGT T TGT GTGTGCGTGCACGTCGGACCCGTTCTGGCCAAGTTGATGCCCACTTCTGT T TCCCCCGCCCCCACCACTCCCCAATCCCACTAATGCTGGCTTGTGT GT  TGGTGGAAAAATCGCGTGATGATGAGCGCCGCCGTACCAAAT TGGTGTCCGGATTTTTGGAAAATAGCAGCCTAGCCGTGCAGCCG TGAT TGTGCG TTAACCACCCTCCCACCCATT TTCCAACCCTCATCACCCGGCTGCATTC GAAAACGGAGTGTGCGTGAGAGCGAGAGAGAGCGAAGAAAAGGAAGAAGAATAATTTCCGTGGAGGAAAAGGAAATTTGACGGAGCAAGCAACAATAGGCTGGATTGCTTTGGAAAGAGTGAACGAGACAGACAGAGAGTGTCATTGTGTGTGTGTGTTTGCGCGTAAGCAAGCGGTCAAGAACAG]
[+] EMBL BX611842             [                                                                                                                                                                                                                                                                tAGCAAAGGC CCCACCGAAAACCGAACGGTGGTGGGCACGTACTGGCGCGTGCCCGTGTGTGTGTGTGTATGTATGTGAGTGT G AGT GTGTGCGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                               ]




>consensus_5421#0
CCGAGGGTTATGACTCGTGCGAAAGAGGACNTGTGTGCGCTCTTGTGTGATGTGCGGAAA
AAGCTTTCCAACCGTGCCTAGTAGCATCATAGATCCTTTTTCTTTAGTTTTATAATTTTT
GGTCGCCACATTTTGGGGGAATCCGGGAGGAGAGCGTGCAATAAAGCGTGAACGAAAGAG
CGAGAGACAGAGAGGGAAGGAGAGAAGAACACACACACAGAAACTGCGTGCGGGGGTGTG
CTGTTAAATTGAAGCAAAGCAAAGGCCCCACCGAAAACCGAACGGTGGTGGGCACGTACT
TTCGCGTGCCTGTGTGTGTGTGTATGTATGTGAGTGTTTGTGTGTGCGTGCATGCCGGAC
CCGTTCTGGCCAAGTTGATGCCCACTACTGTTTCCCCCGCCCCCACCACTCCCCAATCCC
ACTAATGCTGGCTTGTGTGTTGGTGGAAAAATCGCGTGATGATGAGCGCCGCCGTACCAA
ATTGGTGTCCGGATTTTTGGAAAATAGCAGCCTAGCCGTGCAGCCGTGATTGTGCGTTAA
CCACCCTCCCATCCATTTTCCAACCCTCATCACCCCGCTGTATTCGGGAAACGGAGTGTG
CGTGAGAGCGAGAGAGAGCGAAGAAAAGGAAGAAGAATAATTTCCGTGGAGGAAAAGGAA
ATTTGACGGAGCAAGCAACAATAGGCTGGATTGCTTTGGAAAGAGTGAACGAGACAGACA
GAGAGTGTCATTGTGTGTGTGTGTTTGCGCGTAAGCAAGCGGTCAAGAACAG

clustalw multiple alignements is not computed in this case