These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5510#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 695 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGACGGATCCCCTGATAACACCGCTCTACCAACGACCGTGCTGTGCCAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCTTCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGCCAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCGATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGCTATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGGGCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGGTGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGGCTCGATCTGCTGCTATCGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAATAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCCGGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCACGATTCTGCTCGTATTCCAACTGTACCGTACGGTG] [+] EMBL BM587595 [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGACGGATCCCCTGATAACACCGCTCTACCAACGACCGTGCTGTGCCAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCTTCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGCCAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCGATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGCTATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGGGCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGGTGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGGCTCGATCTGCTGCTATCGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAATAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCCGGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCACGATTCTGCTCGTATTCCAACTGTACCGTACGGTG] [+] EMBL BM621089 [ ccgcccACGCGTCCGCGCGACGGATCCCCTGATAACACCGCTCTACCAACGACCGTGCTGTGCCAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCTTCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGCCAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCGATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGCTATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGGGCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGGTGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGGCTCGATCTGCTGCTATCGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAATAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCCGGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCACGATTCTGCTCGTATTCCAACT ] [+] EMBL BM578713 [ ccgCACCGCTCTACCAACGACCGTGCTGTGCCAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCTTCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGCCAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCGATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGCTATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGGGCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGGTGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGGCTCGATCTGCTGCTATCGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAATAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCCGGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGC ] consensusID : consensus_5510#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 669 fasta sequence [CCGCCCACGCGTCCGCCGCTCTACCATCGACCGTGCTGTGCAAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCTTCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGCCAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCGATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGCTATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGGGCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGGTGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGACTCGATCTGCTGCTATCGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAATAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCCGGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCACGATTCTGCTCGTATTCCAACTGTACCGTACGGTGATAGGAGC] [+] EMBL BM629199 [CCGCCCACGCGTCCGCCGCTCTACCATCGACCGTGCTGTGCAAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCTTCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGCCAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCGATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGCTATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGGGCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGGTGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGACTCGATCTGCTGCTATCGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAATAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCCGGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCACGATTCTGCTCGTATTCCAACTGTACCGTACGGTGATAGGAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_5510#0 CCGCGGACGCGTGGGCGGACGCGTGGGCGCGACGGATCCCCTGATAACACCGCTCTACCA 60 consensus_5510#1 ----------------------------------CCGCCCACGCGTCCGCCGCTCTACCA 26 *** * * *********** consensus_5510#0 ACGACCGTGCTGTGCCAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCT 120 consensus_5510#1 TCGACCGTGCTGTGCAAACGACGGAAACATCCTTACGCATGATACTCTAGCGTGTGTGCT 86 ************** ******************************************** consensus_5510#0 TCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGC 180 consensus_5510#1 TCGCGTCGTGTAAGCCAACAGCTGATTGCTGGAATCGGTGCTTCCGCCACTGACCTTTGC 146 ************************************************************ consensus_5510#0 CAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCG 240 consensus_5510#1 CAAGTGATCCTCGCATTTTTGTGGTTTTGTGTGTCGCGTTCCGTCGAGAGCGCTCGATCG 206 ************************************************************ consensus_5510#0 ATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGC 300 consensus_5510#1 ATCAAGTGCAAAGTGAAGTGCAAAGATTGCGAATTCCTTTCACCAATCCTCGGTTCCTGC 266 ************************************************************ consensus_5510#0 TATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGG 360 consensus_5510#1 TATACGCCGAATCAATGGCGCTCGAAGCTACCACATTCTTCGATTGGGCCTCCAACCAGG 326 ************************************************************ consensus_5510#0 GCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGG 420 consensus_5510#1 GCGTTTCCTTCTGGGAAGTTGTGTCCCGCAACTTTACCCATCCTGGTCCCTTCGGTCCGG 386 ************************************************************ consensus_5510#0 TGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGGCTCGATCTGCTGCTAT 480 consensus_5510#1 TGCCAATATCAAACAGTGCACAATTAGTGCCGGATGAAAATCGACTCGATCTGCTGCTAT 446 ******************************************* **************** consensus_5510#0 CGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAA 540 consensus_5510#1 CGCCGGCGCAGTTTGGACTACTTACTGGCGTTGTTTTGTTTCTGTTTCTGCGACACAAAA 506 ************************************************************ consensus_5510#0 TAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCC 600 consensus_5510#1 TAGCCCGATGGAGGGAAGAGCACAGCCACCTCAAAATGACCAGCAGCGCAGACATTCGCC 566 ************************************************************ consensus_5510#0 GGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCA 660 consensus_5510#1 GGGCAGCGTACACCTTCCTAACGTTTCTCGAGTTCTTGGCGCTCGCTCCGTTCTTGTGCA 626 ************************************************************ consensus_5510#0 CGATTCTGCTCGTATTCCAACTGTACCGTACGGTG-------- 695 consensus_5510#1 CGATTCTGCTCGTATTCCAACTGTACCGTACGGTGATAGGAGC 669 *********************************** |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||