Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5515 cluster # 5515       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5515#0 length = 1232 sequences # 4  

consensusID : consensus_5515#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1232
fasta sequence
                              [ACTGGAAAATATTTTTTTGTATGTGTGACGTGACACACTAATTCTGAGCATCGTGGTCATCGCATAGTGTTTTCCAGCTTATGGTAAAAGCATTCTCGGTGTACGCGTGTGCTTGGAAAACTAAGCCCCGGTCGAGGTTGTGTGATCTTGCGATCGAACACGAATTGGCTGGTGGAAAAGAAGTAATAGAAATTAGGAGAGAAAAAGAACGTGCAGGCTACGTGGCGTAGTGGTGTGTTCATTTCTAAGGTTACGTGTGTTAGTACATTTCTTTCTTGTATATCAGCATCATCCAACGTTAGTGTTGTACCTCACATACTAATACTACGGTGAACGCAACAAAGAAGTAGAAAATAAAACAACTTAGTGCTTGTCGTACCGGAAGCAACTGAACGAACCACAGTAATTCTTACACTCTCGAGAAGTGACTCGCTTGTTAGTTCAAAATCAAACAAAGGAATCCAAGAATTCACCCTTGGAATT-CCAAGAACGATTGTAGTGGTGGTGTGCTCATTTCGTTAAGCTAACTTTTCTCTCTGTTGTG-ATAGCGCTGTGAAGCGCATCTACACGTGAGTAAAATTCGGTCCCTAACGAAGGCTCTAGCGCCTCAGCACCACAACACCAAAGAATACCACCAGGCAACGGGACAGCAGCCGCCACTGCCTAGCAACAGTAGTCAATTTTCTTCTTCCACCATTCCGGGAAAAATTGAAAGGGTAGCGGTTCCGCCGTCTGTCGGATTGCGGAGTGCATATCCTACTGCTGGTGCTTCGCCAACCTTCAAGACGGAAGACCCGAGGCAAACGGGGACAGAGTCTCGCGCCACGGGGAGGGAAAATCCAGTCCCCCCCGCTAGCCGACGCTGGGTCCCTCCATCCCTGAGACCGCAACATGGGCTCACCGAAGAGGCCAGAATTGATTCGATTTTTCGAAAAGTTCGTGGTATTCTAAACAAACTTACCCCAGAGAAATTCCAGAAACTTAGTGATGAACTGCTTAAACTAGATCTGAACTCGTCGAAAATTTTGAATGGTGTCATACTGCTGATCTTCGACAAGGCTTTAGATGAACCGAAGTACTCGTCTATGTACGCACAGCTGTGCAAGCGTATACAAAAAGAGCTAGAAACCGACATCGACAAGAGCAAGTCCAGCACCTTCCTGCAAATTCTGCTGAACGTCTGTCGCGACAAGTTCGAGAATCGCGTACAGTATCAATGAGAAGATCATCAA]

[+] EMBL CNS093P1             [ACTGGAAAATATTTTTTTGTATGTGTGACGTGACACACTAATTCTGAGCATCGTGGTCATCGCATAGTGTTTTCCAGCTTATGGTAAAAGCATTCTCGGTGTACGCGTGTGCTTGGAAAACTAAGCCCCGGTCGAGGTTGTGTGATCTTGCGATCGAACACGAATTGGCTGGTGGAAAAGAAGTAATAGAAATTAGGAGAGAAAAAGAACGTGCAGGCTACGTGGCGTAGTGGTGTGTTCATTTCTAAGGTTACGTGTGTTAGTACATTTCTTTCTTGTATATCAGCATCATCCAACGTTAGTGTTGTACCTCACATACTAATACTACGGTGAACGCAACAAAGAAGTAGAAAATAAAACAACTTAGTGCTTGTCGTACCGGAAGCAACTGAACGAACCACAGTAATTCTTACACTCTCGAGAAGTGACTCGCTTGTTAGTTCAAAATCAAACAAAGGAATCCAAGAATTCACCCTTGGAATT CCAAGAACGATTGTAGTGGTGGTGTGCTCATTTCGTTAAGCTAACTTTTCTCTCTGTTGTG ATAGCGCTGTGAAGCGAATCTACACGTGAGTGAAATTCGGTCCCTAACGAAGGCTCTAGCGCCTCAGCACCACAACACCAAAGAATACCACCAGGCAACGGGACAGCAGCCGCCACTGCCTAGCAACAGTAGTCAATTTTCTTCTTCCACCATTCCGGGAAAAATTGAAAGGGTAGCGGTTCCGCCGTCTGTCGGATTGCGGAGTGCATATCCTACTGCTGGTGCTTCGCCAACCTTCAAGACGGAAGACCCGAGGCAAACGGGGACAGAGTCTCGCGCCACGGGGAGGGAAAATCCAGTCCCCCCCGCTAGCCGACGCTGGGTCCCTCCATCCCTGAGACCGCAACATGGGCTCACCGAAGAGGCCAGAATTGATTCGATTTTTCGAAAAGTTCGTGGTATTCTAAACAAACTTACCCCAGAGAAATT                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09R0J             [                           ACGTGACAC CTAATTCTGAGCATCGTGGTCATCGCATAGTGTTTTCCAGCTTATGGTAAAAGCATTCTCGGTGTAAGCGTGTGCTTGGAAAACTAAGCCCCGGTCGAGGTTGTGTGATCTTGCGATCGAACACGAATTGGCTGGTGGAAAAGAAGTAATAGAAATTAGGAGAGAAAAAGAACGTGCAGGCTACGTGGCGTAGTGGTGTGTTCATTTCTAAGGTTACGTGTGTTAGTACATTTCTTTCTTGTATATCAGCATCATCCAACGTTAGTGTGGTACCTCACATACTAATACTACGGTGAACGCAACAAAGAAGTAGAAAATAAAACAACTTAGTGCTTGTCGTACCGGAAGCAACTGAACGAACCACAGTAATTCTTACACTCTCGAGAAGTGACTCGCTTGTTAGTTCAAAATCAAACAAAGGAATCCAAGAATTCACCCTTGGAATT CCAAGAACGATTGTAGTGGTGGTGTGCTCATTTCGTTAAGCTAACTTTTCTCTCTGTTGTG ATAGCGCTGTGAAGCG ATCTACACGTGAGTAAAATTCGGTCCCTAACGAAAGCTCTAGCGCCTCAGCACCACAACACCAAAGAATACCACCAGGCAACGGGACAGCAGCCGCCACTGCCTAGCAACAGTAGTCAATTTTCTTCTTCCACCATTCCGGGAAAAATTGAAAGGGTAGCGGTTCCGCCGTCTGTCGGATTGCGGAGTGCATATCCTACTGCTGGTGCTTCGCCAACCTTCAAGACGGAAGACCCGAGGCAAACGGGGACAGAGTCTCGCGCCACGGGGAGGGAAAATCCAGTtc                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS093P2             [                                                                                                                                                                                                                                                                                TTCTTGTATATCAGCATCATCCAACGTTAGTG TGTACCTCACATACTAATACTACGGTGAACGCAACAAAGAAGTAGAAAATAAAACAACTTAGTGCTTGTCGTACCGGAAGCAACTGAACGAACCACAGTAATTCTTAAACTCTCGAGAAGTAACTCGCTTGTTAGTTCAAAATCAAACAAAGGAATCCAAGAATTCACCCTTGGAATT CCAAGAACGATTGTAGTGGTGGTGTGCTCATTTCGTTAAGCTAACTTTTCTCTCTGTTGTGAATAGCGCTGTGAAGCGCATCTACACGTGAGTAAAATTCGGTCCCTAACGAAGGCTCTAGCGCCTCAGCACCACAACACCAAAGAATACCACCAGGCAACGGGACAGCAGCCGCCACTGCCTAGCAACAGTAGTCAATTTTCTTCTTCCACCATTCCGGGAAAAATTGAAAGGGTAGCGGTTCCGCCGTCTGTCGGATTGCGGAGTGCATATCCTACTGCTGGTG TTCGCCAACCTTCAAGACGGAAGACCCGAGGCAAACGGGGACAGAGTCTCGCGCCACGGGGAGGGAAAATCCAGTCCCCCCCGCTAGCCGACGCTGGGTCCCTCCATCCCTGAGACCGCAACATGGGCTCACCGAAGAGGCCAGAATTGATTCGATTTTTCGAAAAGTTCGTGGTATTCTAAACAAACTTACCCCAGAGAAATTCCAGAAACTTAGTGATGAACTGCTTAAACTAGATCTGAACTCGTCGAAAATTTTGAATGGTGTCATACTGCTGATCTTCGACAAGGCTTTAGATGAACCGAAGTACTCGTCTATGTACGCACAGCTGTGCAAGCGTATACAAAAAGAGCTAGAAACCGACATCGACAAGAGCAAGTCCAGCACCTTCCTGCAAATTCTGCTGAACGTCTGTCGCGACAAGTTCGAGAATCGCGTACAGTATCAATGAGAAGATCATCAA]
[-] EMBL CNS09R0K             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAACAAAGGAATCCAAGAATTCACCCTTGGAATTCCCAAGAACGATTGTAGTGGTGGTGTGCTCATTTCGTTAAGCTAACTTTTCTCTCTGTTGTG ATAGCGCTGTGAAGCGCATCTACACGTGAGTAAAATTCGGTCCCTAACGAAAGCTCTAGCGCCTCAGCACCACAACACCAAAGAATACCACCAGGCAACGGGACAGCAGCCGCCACTGCCTAGCAACAGTAGTCAATTTTCTTCTTCCACCATTCCGGGAAAAATTGAAAGGGTAGCGGTTCCGCCGTCTGTCGGATTGCGGAGTGCATATCCTACTGCTGGTG TTCGCCAACCTTCAAGACGGAAGACCCGAGGCAAACGGGGACAGAGTCTCGCGCCACGGGGAGGGAAAATCCAGTCCCCCCCGCTAGCCGACGCTGGGTCCCTCCATCCCTGAGACCGCAACATGGGCTCACCGAAGAGGCCAGAATTGATTCGATTTTTCGAAAAGTTCGTGGTATTCTAAACAAACTTACCCCAGAGAAATTCCAGAAACTTAGTGATGAACTGCTTAAACTAGATCTGAACTCGTCGAAAATTTTGAATGGTGTCATACTGCTGATCTTCGACAAGGCTTTAGATGAACCGAAGTACTCGTCTATGTACGCACAGCTGTGCAAGCGTATACAAAAAGAGCTAGAAACCGACATCGACAAGAGCAAGTCCAGCACCTTCCTGCAAATTCTGCTGGACGTCTGTCGCGACAAGTTCGAGAATCGCGTACA                      ]


>consensus_5515#0 ACTGGAAAATATTTTTTTGTATGTGTGACGTGACACACTAATTCTGAGCATCGTGGTCAT CGCATAGTGTTTTCCAGCTTATGGTAAAAGCATTCTCGGTGTACGCGTGTGCTTGGAAAA CTAAGCCCCGGTCGAGGTTGTGTGATCTTGCGATCGAACACGAATTGGCTGGTGGAAAAG AAGTAATAGAAATTAGGAGAGAAAAAGAACGTGCAGGCTACGTGGCGTAGTGGTGTGTTC ATTTCTAAGGTTACGTGTGTTAGTACATTTCTTTCTTGTATATCAGCATCATCCAACGTT AGTGTTGTACCTCACATACTAATACTACGGTGAACGCAACAAAGAAGTAGAAAATAAAAC AACTTAGTGCTTGTCGTACCGGAAGCAACTGAACGAACCACAGTAATTCTTACACTCTCG AGAAGTGACTCGCTTGTTAGTTCAAAATCAAACAAAGGAATCCAAGAATTCACCCTTGGA ATTCCAAGAACGATTGTAGTGGTGGTGTGCTCATTTCGTTAAGCTAACTTTTCTCTCTGT TGTGATAGCGCTGTGAAGCGCATCTACACGTGAGTAAAATTCGGTCCCTAACGAAGGCTC TAGCGCCTCAGCACCACAACACCAAAGAATACCACCAGGCAACGGGACAGCAGCCGCCAC TGCCTAGCAACAGTAGTCAATTTTCTTCTTCCACCATTCCGGGAAAAATTGAAAGGGTAG CGGTTCCGCCGTCTGTCGGATTGCGGAGTGCATATCCTACTGCTGGTGCTTCGCCAACCT TCAAGACGGAAGACCCGAGGCAAACGGGGACAGAGTCTCGCGCCACGGGGAGGGAAAATC CAGTCCCCCCCGCTAGCCGACGCTGGGTCCCTCCATCCCTGAGACCGCAACATGGGCTCA CCGAAGAGGCCAGAATTGATTCGATTTTTCGAAAAGTTCGTGGTATTCTAAACAAACTTA CCCCAGAGAAATTCCAGAAACTTAGTGATGAACTGCTTAAACTAGATCTGAACTCGTCGA AAATTTTGAATGGTGTCATACTGCTGATCTTCGACAAGGCTTTAGATGAACCGAAGTACT CGTCTATGTACGCACAGCTGTGCAAGCGTATACAAAAAGAGCTAGAAACCGACATCGACA AGAGCAAGTCCAGCACCTTCCTGCAAATTCTGCTGAACGTCTGTCGCGACAAGTTCGAGA ATCGCGTACAGTATCAATGAGAAGATCATCAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)