These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_553#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 481 fasta sequence [CCGCACAACTTTGCCGGGATAATCGGATTTGGAGAGCTAAATTTATAGCTTTGCCCCCAGAAACATGGTTTTTACATCGGTGGTGAACTTTGTGCGCTCCCGGGGACCGGACGAGTTCTGGAGAAAGCGCAGGATTTTCAAACTAGCCGCACACTACGTCGGTCGTCGGCGCAATTGCTATTCCATTGCGATTCGAAATGTAAACCGAGCCCTTGCATACGCCACGAAAGGACGTGAGCTGAAGAAAGAGGATATGCGAGAGCTGTGGACACAGCGAGTCAATGCAGGGTGCGAGCAGCATGGTATGCAGTTTGCCGACTTCCAGTATGGGCTGTATCGCAATGATATTCTGTTGAACCGGAAAGTGCTGGCCGACTTGGCCATTTGGGAACCGAGAACGTTTGAGGCGCTTGCCAAGATAAGCCAGCAAGTTCCAGAGGAGGGAAGCGGAGATAAATAAGTGATTCAATAAGTATGTAGC] [+] EMBL BM642696 [CCGCACAACTTTGCCGGGATAATCGGATTTGGAGAGCTAAATTTATAGCTTTGCCCCCAGAAACATGGTTTTTACATCGGTGGTGAACTTTGTGCGCTCCCGGGGACCGGACGAGTTCTGGAGAAAGCGCAGGATTTTCAAACTAGCCGCACACTACGTCGGTCGTCGGCGCAATTGCTATTCCATTGCGATTCGAAATGTAAACCGAGCCCTTGCATACGCCACGAAAGGACGTGAGCTGAAGAAAGAGGATATGCGAGAGCTGTGGACACAGCGAGTCAATGCAGGGTGCGAGCAGCATGGTATGCAGTTTGCCGACTTCCAGTATGGGCTGTATCGCAATGATATTCTGTTGAACCGGAAAGTGCTGGCCGACTTGGCCATTTGGGAACCGAGAACGTTTGAGGCGCTTGCCAAGATAAGCCAGCAAGTTCCAGAGGAGGGAAGCGGAGATAAATAAGTGATTCAATAAGTATGTAGC] consensusID : consensus_553#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 469 fasta sequence [CCGCCCACGCGTCCGGGATAATCGGATTTGGAGAGCTAAATTTATAGCTTTGCCCCCAGAAACATGGTTTTTACATCGGTGGTGAACTTTGTGCGCTCCCGGGGACCGGACGAGTTCTGGAGAAAGCGCAGGATTTTCAAACTAGCCGCACACTACATCGGTCGTCGGCGCAATTGCTATTCCATTGCGATTCGAAATGTAAACCGAGCCCTTGCATACGCCACGAAAGGACGTGAACTGAAGAAGGAAGATATGCGAGAGCTGTGGACACAGCGAGTCAATGCAGGGTGCGAGCAGCATGGAATGCAGTTTGCCGATTTCCAGTATGGGCTGTATCGCAATGATATTCTGTTGAACCGGAAAGTGCTGGCCGACTTGGCCATTTGGGAACCGAGAACGTTTGAGGCGCTTGCCAAGATAAGCCAGCAAGTTCCAGAGGAGGGAAGCGGAGATAAATAAGTGATTCAAT] [+] EMBL BM581093 [CCGCCCACGCGTCCGGGATAATCGGATTTGGAGAGCTAAATTTATAGCTTTGCCCCCAGAAACATGGTTTTTACATCGGTGGTGAACTTTGTGCGCTCCCGGGGACCGGACGAGTTCTGGAGAAAGCGCAGGATTTTCAAACTAGCCGCACACTACATCGGTCGTCGGCGCAATTGCTATTCCATTGCGATTCGAAATGTAAACCGAGCCCTTGCATACGCCACGAAAGGACGTGAACTGAAGAAGGAAGATATGCGAGAGCTGTGGACACAGCGAGTCAATGCAGGGTGCGAGCAGCATGGAATGCAGTTTGCCGATTTCCAGTATGGGCTGTATCGCAATGATATTCTGTTGAACCGGAAAGTGCTGGCCGACTTGGCCATTTGGGAACCGAGAACGTTTGAGGCGCTTGCCAAGATAAGCCAGCAAGTTCCAGAGGAGGGAAGCGGAGATAAATAAGTGATTCAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_553#0 CCGCACAACTTTGCCGGGATAATCGGATTTGGAGAGCTAAATTTATAGCTTTGCCCCCAG 60 consensus_553#1 CCGCCCA-CGCGTCCGGGATAATCGGATTTGGAGAGCTAAATTTATAGCTTTGCCCCCAG 59 **** ** * *********************************************** consensus_553#0 AAACATGGTTTTTACATCGGTGGTGAACTTTGTGCGCTCCCGGGGACCGGACGAGTTCTG 120 consensus_553#1 AAACATGGTTTTTACATCGGTGGTGAACTTTGTGCGCTCCCGGGGACCGGACGAGTTCTG 119 ************************************************************ consensus_553#0 GAGAAAGCGCAGGATTTTCAAACTAGCCGCACACTACGTCGGTCGTCGGCGCAATTGCTA 180 consensus_553#1 GAGAAAGCGCAGGATTTTCAAACTAGCCGCACACTACATCGGTCGTCGGCGCAATTGCTA 179 ************************************* ********************** consensus_553#0 TTCCATTGCGATTCGAAATGTAAACCGAGCCCTTGCATACGCCACGAAAGGACGTGAGCT 240 consensus_553#1 TTCCATTGCGATTCGAAATGTAAACCGAGCCCTTGCATACGCCACGAAAGGACGTGAACT 239 ********************************************************* ** consensus_553#0 GAAGAAAGAGGATATGCGAGAGCTGTGGACACAGCGAGTCAATGCAGGGTGCGAGCAGCA 300 consensus_553#1 GAAGAAGGAAGATATGCGAGAGCTGTGGACACAGCGAGTCAATGCAGGGTGCGAGCAGCA 299 ****** ** ************************************************** consensus_553#0 TGGTATGCAGTTTGCCGACTTCCAGTATGGGCTGTATCGCAATGATATTCTGTTGAACCG 360 consensus_553#1 TGGAATGCAGTTTGCCGATTTCCAGTATGGGCTGTATCGCAATGATATTCTGTTGAACCG 359 *** ************** ***************************************** consensus_553#0 GAAAGTGCTGGCCGACTTGGCCATTTGGGAACCGAGAACGTTTGAGGCGCTTGCCAAGAT 420 consensus_553#1 GAAAGTGCTGGCCGACTTGGCCATTTGGGAACCGAGAACGTTTGAGGCGCTTGCCAAGAT 419 ************************************************************ consensus_553#0 AAGCCAGCAAGTTCCAGAGGAGGGAAGCGGAGATAAATAAGTGATTCAATAAGTATGTAG 480 consensus_553#1 AAGCCAGCAAGTTCCAGAGGAGGGAAGCGGAGATAAATAAGTGATTCAAT---------- 469 ************************************************** consensus_553#0 C 481 consensus_553#1 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||