cluster # 5600

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Anopheles gambiae
cluster # 5600 cluster # 5600 Sequences # 4 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5600#0 length = 1298 sequences # 2

consensus_5600#1 length = 710 sequences # 1
consensus_5600#2 length = 661 sequences # 1

consensusID : consensus_5600#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1298
fasta sequence

                              [CGATTCTCGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTAACCAGCTAAAAGTGTGTTGTGTGTATTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTATTGTATAAGAGTTTAATTTTATTTTTACCGTTTTCCGACTTAACGACGGGTTTTTAGTGTAAAAAAACATAAAAAAAAACAATTCTGCCTCACTACAAGACTCCTGCAGAAGAAGTCTTCTAAAACACGTGTTTTTGCATGCGCGAACCTGTATCAGGCTACCGCAAAAGTGAAGATAAGGACGAGAAGGTAAAGTTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAGCCTTCTTCCTACCACCTTTTCCATCAAGTTTTTAACATAGTTTTACAACAAGTCCTGTTTCGTAAGTCCAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGGTGGAAGCGCAAATTGGTTTTTTTTTGTAGAAAATAGAACGATTAAGAAGGACAAAAAGGATCGTCGTTAAATGAACATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGCGTATTACTAGTTGATTTCTGCCAGCAGACTATCCCCGCTTGTTTTCACCTTGCAACTCCCTTTCCAGCTAAAAGTGAACTTCCTGTTTCGTGTTAATTTTTTGGTTCGCCTCTTCTCTCTCAGAGTTTTTCGCTTAATATTGCAATATACATTATTGCTACCGTTTTGTTTTTGTTTAGATTCTCAGCCTCTCCCTGCACTCACCTAGTGTATCGCCTATCGCTAATACTTCAAAACTGCTACTAAACATCACTAAATCCGTAGATTAAAATCCCATCTTCTTGGCGACCACGTGGCTGTAA-CGCCGCCATATTGTAAGCGTGTTGGCGGTGGTGGCGCTGAGCTTTTTGCTACACTTTCTTTCAACTTTGATTGCTTGTTTTGTTTTTTTCTTCCACTGCTACTTCTAATTCCGCTTCTTGTAGTCCAATGTGAAGGAGTGTAAGAAACGTATAGTTTTCTTGTTCACTTCTGTAACTTAACACTTTCACGAACACAAAGTTCACTAACTGTCTAATTTGAGCAATAAACTCCAATTGATTGATCCAATCTACAAACGCAAATGGTTTGAATAATGTTGAAACCTCTCTCTGTCTCTCTCGCTCTTTCTTTTACTGTTACTTAAACCATAATTACCGTTGAGTGATGCTGTACTTCA]

[+] EMBL CNS08Y1T             [CGATTCTCGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTAACCAGCTAAAAGTGTGTTGTGTGTATTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTATTGTATAAGAGTTTAATTTTATTTTTACCGTTTTCCGACTTAACGACGGGTTTTTAGTGTAAAAAAACATAAAAAAAAACAATTCTGCCTCACTACAAGACTCCTGCAGAAGAAGTCTTCTAAAACACGTGTTTTTGCATGCGCGAACCTGTATCAGGCTACCGCAAAAGTGAAGATAAGGACGAGAAGGTAAAGTTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAGCCTTCTTCCTACCACCTTTTCCATCAAGTTTTTAACATAGTTTTACAACAAGTCCTGTTTCGTAAGTCCAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGGTGGAAGCGCAAATTGGTTTTTTTTTGTAGAAAATAGAACGATTAAGAAGGACAAAAAGGATCGTCGTTAAATGAACATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGCGTATTACTAGTTGATTTCTGCCAGCAGACTATCCCCGCTTGTTTTCACCTTGCAACTCCCTTTCCAGCTAAAAGTGAACTTCCTGTTTCGTGTTAATTTTTTGGTTCGCCTCTTCTCTCTCAGAGTTTTTCGCTTAATATTGCAATATACATTATTGCTACCGTTTTGTTTTTGTTTAGATTCTCAGCCTCTCCCTGCACTCACCTAGTGTATCGCCTATCGCTAATACTTCAAAACTGCTACTAAACATCACTAAATCCGTAGATTAAAATCCCATCTTCTTGGCGACCACGTGGCTGTAA CGCC                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08Y1S             [                                                                                                                                                                                                                                                                                                                                                                                                                  TCTTCCTACCACCTTTTCCATCAAGTTTTTAACATAGTTTTACAACAAGTCCTGTTTCGTAAGTCCAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGGTGGAAGCGCAAATTGGTTTTTTTTTGTAGAAAATAGAACGATTAAGAAGGACAAAAAGGATCGTCGTTAAATGAACATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGCGTATTACTAGTTGATTTCTGCCAGCAGACTATCCCCGCTTGTTTTCACCTTGCAACTCCCTTTCCAGCTAAAAGTGAACTTCCTGTTTCGTGTTAATTTTTTGGTTCGCCTCTTCTCTCTCAGAGTTTTTCGCTTAATATTGCAATATACATTATTGCTACCGTTTTGTTTTTGTTTAGATTCTCAGCCTCTCCCTGCACTCACCTAGTGTATCGCCTATCGCTAATACTTCAAAACTGCTACTAAACATCACTAAATCCGTAGATTAAAATCCCATCTTCTTGGCGACCACGTGGCTGTAAGCGCCGCCATATTGTAAGCGTGTTGGCGGTGGTGGCGCTGAGCTTTTTGCTACACTTTCTTTCAACTTTGATTGCTTGTTTTGTTTTTTTCTTCCACTGCTACTTCTAATTCCGCTTCTTGTAGTCCAATGTGAAGGAGTGTAAGAAACGTATAGTTTTCTTGTTCACTTCTGTAACTTAACACTTTCACGAACACAAAGTTCACTAACTGTCTAATTTGAGCAATAAACTCCAATTGATTGATCCAATCTACAAACGCAAATGGTTTGAATAATGTTGAAACCTCTCTCTGTCTCTCTCGCTCTTTCTTTTACTGTTACTTAAACCATAATTACCGTTGAGTGATGCTGTACTTCA]




>consensus_5600#0
CGATTCTCGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTAACCAGCTAAAAGT
GTGTTGTGTGTATTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTATTGTATAAGA
GTTTAATTTTATTTTTACCGTTTTCCGACTTAACGACGGGTTTTTAGTGTAAAAAAACAT
AAAAAAAAACAATTCTGCCTCACTACAAGACTCCTGCAGAAGAAGTCTTCTAAAACACGT
GTTTTTGCATGCGCGAACCTGTATCAGGCTACCGCAAAAGTGAAGATAAGGACGAGAAGG
TAAAGTTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTCCTTTTCAGTTT
AATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAGCCTTCTTCCTACCACCTTTTC
CATCAAGTTTTTAACATAGTTTTACAACAAGTCCTGTTTCGTAAGTCCAATGTCCAAACC
CGCGACCATAAAAAGACGTATGCCCGGCGGTGGAAGCGCAAATTGGTTTTTTTTTGTAGA
AAATAGAACGATTAAGAAGGACAAAAAGGATCGTCGTTAAATGAACATTAGACAACTCAG
TAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGCGTATTACTAGTTGATTTCTG
CCAGCAGACTATCCCCGCTTGTTTTCACCTTGCAACTCCCTTTCCAGCTAAAAGTGAACT
TCCTGTTTCGTGTTAATTTTTTGGTTCGCCTCTTCTCTCTCAGAGTTTTTCGCTTAATAT
TGCAATATACATTATTGCTACCGTTTTGTTTTTGTTTAGATTCTCAGCCTCTCCCTGCAC
TCACCTAGTGTATCGCCTATCGCTAATACTTCAAAACTGCTACTAAACATCACTAAATCC
GTAGATTAAAATCCCATCTTCTTGGCGACCACGTGGCTGTAACGCCGCCATATTGTAAGC
GTGTTGGCGGTGGTGGCGCTGAGCTTTTTGCTACACTTTCTTTCAACTTTGATTGCTTGT
TTTGTTTTTTTCTTCCACTGCTACTTCTAATTCCGCTTCTTGTAGTCCAATGTGAAGGAG
TGTAAGAAACGTATAGTTTTCTTGTTCACTTCTGTAACTTAACACTTTCACGAACACAAA
GTTCACTAACTGTCTAATTTGAGCAATAAACTCCAATTGATTGATCCAATCTACAAACGC
AAATGGTTTGAATAATGTTGAAACCTCTCTCTGTCTCTCTCGCTCTTTCTTTTACTGTTA
CTTAAACCATAATTACCGTTGAGTGATGCTGTACTTCA

consensusID : consensus_5600#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 710
fasta sequence

                              [ATTAAAATACAGTTCAGTTGCAGTGCACATTTTGTGTGCCAAAGTACGGAGACGGTGGATGAAACGCAAACGCAGTGGAAAACGAACATAAAAAGAAACATCAGTAAAATCCAATAGGTTTCCAATTTGTATCCTTCCATTTCATTAATTGATTTCCTCTTTTTTAAATTTCTTTTTAGTGTTTAGATGGTTTTGATTCTAGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTAACCAGCTAAAAGTGTGTTGTGTGTATTTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTATTGTATAAGGTTTAAAATTATTTTTATCGTTTTCCGACCTAACGACGGGTTTTTAGGGTAAAAAACATAAAAAAAAAAACAATTTAGCCGCACTACAAGACCCCTGCAGAAGAAGTCTTCTAAAACACGTGTTTTTTGCATGCGCGAACCTGTATCAGGCTACCTCGAAAGTGAAGATAAGGACGAGAAGGTAAAGCTATCGCGCTTCTCGTGCCAGAAAATGGGCGCCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAAAGCGCGCCCAAGGGATAGTTCCTTCTTAGCCTTCTTTCTACCAATTTTTCCACCAAGTTTTTAACATAGTTTTACAACAAGTCTTGTTTCGTGTGTCCAATGTCCAAACCCGCCGG]

[-] EMBL BM585316             [ATTAAAATACAGTTCAGTTGCAGTGCACATTTTGTGTGCCAAAGTACGGAGACGGTGGATGAAACGCAAACGCAGTGGAAAACGAACATAAAAAGAAACATCAGTAAAATCCAATAGGTTTCCAATTTGTATCCTTCCATTTCATTAATTGATTTCCTCTTTTTTAAATTTCTTTTTAGTGTTTAGATGGTTTTGATTCTAGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTAACCAGCTAAAAGTGTGTTGTGTGTATTTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTATTGTATAAGGTTTAAAATTATTTTTATCGTTTTCCGACCTAACGACGGGTTTTTAGGGTAAAAAACATAAAAAAAAAAACAATTTAGCCGCACTACAAGACCCCTGCAGAAGAAGTCTTCTAAAACACGTGTTTTTTGCATGCGCGAACCTGTATCAGGCTACCTCGAAAGTGAAGATAAGGACGAGAAGGTAAAGCTATCGCGCTTCTCGTGCCAGAAAATGGGCGCCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAAAGCGCGCCCAAGGGATAGTTCCTTCTTAGCCTTCTTTCTACCAATTTTTCCACCAAGTTTTTAACATAGTTTTACAACAAGTCTTGTTTCGTGTGTCCAATGTCCAAACCCGCCGG]




>consensus_5600#1
ATTAAAATACAGTTCAGTTGCAGTGCACATTTTGTGTGCCAAAGTACGGAGACGGTGGAT
GAAACGCAAACGCAGTGGAAAACGAACATAAAAAGAAACATCAGTAAAATCCAATAGGTT
TCCAATTTGTATCCTTCCATTTCATTAATTGATTTCCTCTTTTTTAAATTTCTTTTTAGT
GTTTAGATGGTTTTGATTCTAGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTA
ACCAGCTAAAAGTGTGTTGTGTGTATTTTTTTGTATATCCTTGCCTCGAGAGAGTATAAT
CTTATTGTATAAGGTTTAAAATTATTTTTATCGTTTTCCGACCTAACGACGGGTTTTTAG
GGTAAAAAACATAAAAAAAAAAACAATTTAGCCGCACTACAAGACCCCTGCAGAAGAAGT
CTTCTAAAACACGTGTTTTTTGCATGCGCGAACCTGTATCAGGCTACCTCGAAAGTGAAG
ATAAGGACGAGAAGGTAAAGCTATCGCGCTTCTCGTGCCAGAAAATGGGCGCCCTTTGGC
GCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAAAGCGCG
CCCAAGGGATAGTTCCTTCTTAGCCTTCTTTCTACCAATTTTTCCACCAAGTTTTTAACA
TAGTTTTACAACAAGTCTTGTTTCGTGTGTCCAATGTCCAAACCCGCCGG

consensusID : consensus_5600#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 661
fasta sequence

                              [TATTTTTACCGTTTTCCGACTTAACGACGGGTTTTTAGTGTAAAAAAACATAAATAAAAACAATTCAGCCACGTGTTTTTTTGCATGCGTGATCTCCTGTATCAGGCTACCACGGAAGTGAAGATAAGGACGAGAAGGTAAAGCTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTAGCCTTCTTACTATCAACTTTTCCACCAACTTTTTAACATAGTTTTACAACAAGTCTTGTTACGAATGTCCAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGTGGTGGAAGCGCAAATTGGTTTTTTGTGAGTAGAAAATAGAACGGTTAAGAAGGACAGAAAGGATCGTCGTTAAATTAGCATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGCGTATTACTAGTTGATTTCTGCCAGCAGACTACCCCCGCTTGTTTTCACCTTTTAACTCCCTTTCGAGCTAAAAGTGAATTTCCTGTTTCGTATTTTTTGGTTCGCCTCTTCTCTGTCACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGG]

[-] EMBL BM600756             [TATTTTTACCGTTTTCCGACTTAACGACGGGTTTTTAGTGTAAAAAAACATAAATAAAAACAATTCAGCCACGTGTTTTTTTGCATGCGTGATCTCCTGTATCAGGCTACCACGGAAGTGAAGATAAGGACGAGAAGGTAAAGCTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTAGCCTTCTTACTATCAACTTTTCCACCAACTTTTTAACATAGTTTTACAACAAGTCTTGTTACGAATGTCCAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGTGGTGGAAGCGCAAATTGGTTTTTTGTGAGTAGAAAATAGAACGGTTAAGAAGGACAGAAAGGATCGTCGTTAAATTAGCATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGCGTATTACTAGTTGATTTCTGCCAGCAGACTACCCCCGCTTGTTTTCACCTTTTAACTCCCTTTCGAGCTAAAAGTGAATTTCCTGTTTCGTATTTTTTGGTTCGCCTCTTCTCTGTCACCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGG]




>consensus_5600#2
TATTTTTACCGTTTTCCGACTTAACGACGGGTTTTTAGTGTAAAAAAACATAAATAAAAA
CAATTCAGCCACGTGTTTTTTTGCATGCGTGATCTCCTGTATCAGGCTACCACGGAAGTG
AAGATAAGGACGAGAAGGTAAAGCTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTT
GGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTAGCCTT
CTTACTATCAACTTTTCCACCAACTTTTTAACATAGTTTTACAACAAGTCTTGTTACGAA
TGTCCAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGTGGTGGAAGCGCAA
ATTGGTTTTTTGTGAGTAGAAAATAGAACGGTTAAGAAGGACAGAAAGGATCGTCGTTAA
ATTAGCATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAAACACGAAGCCGC
GTATTACTAGTTGATTTCTGCCAGCAGACTACCCCCGCTTGTTTTCACCTTTTAACTCCC
TTTCGAGCTAAAAGTGAATTTCCTGTTTCGTATTTTTTGGTTCGCCTCTTCTCTGTCACC
CACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCG
G

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5600#0      CGATTCTCGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTAACCAGCTAAAAGT 60
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      GTGTTGTGTGTATTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTATTGTATAAGA 120
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ---------------------------------------ATTAAAATACAGTTCAGTTGC 21
                                                                                  

consensus_5600#0      GTTTAATTTTATTTTTACCGTTTTCCGAC-----TTAACGA--CGGGTTTTTAGTGTAAA 173
consensus_5600#2      ---------TATTTTTACCGTTTTCCGAC-----TTAACGA--CGGGTTTTTAGTGTAAA 44
consensus_5600#1      AGTGCACATTTTGTGTGCCAAAGTACGGAGACGGTGGATGAAACGCAAACGCAGTGGAAA 81
                               * * * * **    * **       *  * **  **       **** ***

consensus_5600#0      A-AAACATAAAAAAAAACAATTCTGCCTCACTACAAGACTCCTGCAGAAGAAGTCTTCTA 232
consensus_5600#2      A-AAACATAAATAAAAACAATTCAGCC--------------------------------- 70
consensus_5600#1      ACGAACATAAAAAGAAACA--TCAGTAAAATCCAATAGGTTTCCAA-----------TTT 128
                      *  ******** * *****  ** *                                   

consensus_5600#0      AAACACGTGTTTTTGCATGCGCGAAC--CTGTATCA-GGCTACCGCAAAAGTGAAGATAA 289
consensus_5600#2      --ACGTGTTTTTTTGCATGCGTGATCTCCTGTATCA-GGCTACCACGGAAGTGAAGATAA 127
consensus_5600#1      GTATCCTTCCATTTCATTAATTGATTTCCTCTTTTTTAAATTTCTTTTTAGTGTTTAGAT 188
                        *    *   ***   *    **    ** * *      *  *     ****   * * 

consensus_5600#0      GGACGAGAAGGTAAAGTTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTC 349
consensus_5600#2      GGACGAGAAGGTAAAGCTACCGCGCTTCTCGTGCCGGAAAATGGGCTCCCTTTGGCGCTC 187
consensus_5600#1      GGTTTTGATTCTAGATGTGTCTTATGTTTTATTGCACAACATCTGCAAACTA----ACCA 244
                      **    **   ** *  *  *     * *  *  *  ** **  **   **      *  

consensus_5600#0      CTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTTTAGCCT--TCTTC 407
consensus_5600#2      CTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTT-AGCCT--TCTTA 244
consensus_5600#1      GCTAAAAGTGTGTTGTGTGTATTTTTTTGTATATCCTTGCCTCGAGAGAGTATAATCTTA 304
                        *   *** *  *     * * ** **** *      ****      **  *  **** 

consensus_5600#0      CTACCACCTTTTCCATCAAGTTTTTAACATAGTTTTACAACAAGTCCTGTTTCGTAAGTC 467
consensus_5600#2      CTATCAACTTTTCCACCAACTTTTTAACATAGTTTTACAACAAGTCTTGTTACGAATGTC 304
consensus_5600#1      TTGTATAAGGTT---TAAAATTATTTTTATCGTTTTCCGAC----CTAACGACGGGTTTT 357
                       *        **     ** ** **   ** ***** * **    *      **    * 

consensus_5600#0      CAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCG--GTGGAAGCGCAAATTG 525
consensus_5600#2      CAATGTCCAAACCCGCGACCATAAAAAGACGTATGCCCGGCGTGGTGGAAGCGCAAATTG 364
consensus_5600#1      TAGGGTAAAAAACATAAAAAAAAAAACAATTTAGCCGCACTACAAGACCCCTGCAGAAGA 417
                       *  **  *** *    *  * ****  *  **  * *              *** *   

consensus_5600#0      GTTTTTTTTT-GTAGAAAATAGAACGATTAAGAAGGACAAAAAGGATCGTCGTTAAATGA 584
consensus_5600#2      GTTTTTTGTGAGTAGAAAATAGAACGGTTAAGAAGGACAGAAAGGATCGTCGTTAAATTA 424
consensus_5600#1      AGTCTTC-----TAAAACACGTGTTTTTTGCATGCGCGAACCTGTATCAG-GCTACCTCG 471
                        * **      ** ** *        **      *  *    * ***   * **  *  

consensus_5600#0      ACATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAA-ACACGAAGCCGCGTA 643
consensus_5600#2      GCATTAGACAACTCAGTAACACCGCTAATCACTAACAAGATTAA-ACACGAAGCCGCGTA 483
consensus_5600#1      AAAGTGAAGATAAGGACGAGAAGGTAAAGCTATCGCGCTTCTCGTGCCAGAAAATGGGCG 531
                        * *  * *        * *  *  ** *  *  *     *    *  ***   * *  

consensus_5600#0      TTACTAGTTGATTTCTGCCAGCAGACTATCCCCGC-TTGTTTTCACCTTGCAACTCCCTT 702
consensus_5600#2      TTACTAGTTGATTTCTGCCAGCAGACTACCCCCGC-TTGTTTTCACCTTTTAACTCCCTT 542
consensus_5600#1      CCCTTTGGCGCTCCTTTTCAGTTTAATAACCCTGTATTGTTGTGTGCTTCCGCCTTTTTT 591
                          * *  * *   *  ***   * ** *** *  ***** *   ***    **   **

consensus_5600#0      T----CCAGCTAAAAGTGAACTTCCTGTTTCGTGTTAATTTTTTGGTTCGCCTCTTCTCT 758
consensus_5600#2      T----CGAGCTAAAAGTGAATTTCCTGTTTCGT----ATTTTTTGGTTCGCCTCTTCTCT 594
consensus_5600#1      TAAAGCGCGCCCAAGGGATAGTTCCTTCTTAGC----CTTCTTTCTACCAATTTTTC--- 644
                      *    *  **  ** *   * *****  ** *      ** ***    *   * ***   

consensus_5600#0      CTCAGAGTTTTTCGCTTAATATTGCAATATACATTATTGCTACCGTTTTGTTTT-TGTTT 817
consensus_5600#2      GTCAC--CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG-CCCAC 651
consensus_5600#1      --CAC---CAAGTTTTTAACATAGTTTTACAACAAGTCTTGTTTCGTGTGTCCAATGTCC 699
                        **                   *                         **         

consensus_5600#0      AGATTCTCAGCCTCTCCCTGCACTCACCTAGTGTATCGCCTATCGCTAATACTTCAAAAC 877
consensus_5600#2      GCGTCCGCGG-------------------------------------------------- 661
consensus_5600#1      AAACCCGCCGG------------------------------------------------- 710
                           * * *                                                  

consensus_5600#0      TGCTACTAAACATCACTAAATCCGTAGATTAAAATCCCATCTTCTTGGCGACCACGTGGC 937
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      TGTAACGCCGCCATATTGTAAGCGTGTTGGCGGTGGTGGCGCTGAGCTTTTTGCTACACT 997
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      TTCTTTCAACTTTGATTGCTTGTTTTGTTTTTTTCTTCCACTGCTACTTCTAATTCCGCT 1057
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      TCTTGTAGTCCAATGTGAAGGAGTGTAAGAAACGTATAGTTTTCTTGTTCACTTCTGTAA 1117
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      CTTAACACTTTCACGAACACAAAGTTCACTAACTGTCTAATTTGAGCAATAAACTCCAAT 1177
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      TGATTGATCCAATCTACAAACGCAAATGGTTTGAATAATGTTGAAACCTCTCTCTGTCTC 1237
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      TCTCGCTCTTTCTTTTACTGTTACTTAAACCATAATTACCGTTGAGTGATGCTGTACTTC 1297
consensus_5600#2      ------------------------------------------------------------
consensus_5600#1      ------------------------------------------------------------
                                                                                  

consensus_5600#0      A 1298
consensus_5600#2      -
consensus_5600#1      -