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Anopheles gambiae
cluster # 5601 cluster # 5601       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5601#0 length = 1301 sequences # 4  

consensusID : consensus_5601#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1301
fasta sequence
                              [TCGTGCGTGTCGCCTATTCGTGGCTGCTGTAGTTGGTGCGGTGATCCTTATTGTGAATTTTTAGCACTCAACTTGTTGAATCGAACCTGTCTCACGTTGGGTCCGTGACCGTAAAAACCTAGGTTAACTGAACTCTCGCGAACGTCTGCAGTACTATGGGAAAGGCAAAGAAAGGGAAGAAGGAAGCAGCGGGTGCCGGTCTCGAGGACAAGTATGTATTTCAACCGAAGACTAGTGAAACTGAACGAAGTAGTCGGAGGGTCATTTTGTTCGGGTTGAGTGATCGGTATTTTTTTTATTTTATTTTAGTGCCAGCGATAACGATGGAGTCCCACAGACGGATATAACGGAAGTAGAGGTGGAAAATAGAAAGAATGATAAGAAATCTAAAAAGGAAAAGAGAGCCAAGAAAGCGGCTGTGGATAGCGACGAGGGTGAAGATGAAGTAACCGAGGTAACGGAACCAGTCAAAAAAACGGCTGTAACGAAGAAGAAGGAAAAGCCAACGACTGAAACGGAGCCAACAGAAGCGAACGATTCGGATGATGGTGGTAAAAGCAACAAGACCAAGGAAGCGAAGAAGAAAAAGTCTGCTAAATCTGGCCCCGTTGGATTTTCCCTGCTTATGATGGACGACGACGATGATGATGATAATGATGATGATGATGACGGAAGGGAGGAAGAGGAGCACGATCGCGAACAAGTGTCTCGCAAAAGCTCGATCGAAGAGGATGTTGGCCCTAAAGAAGGGGGCAAAGGAAAAAAGGGCAAGAAAGAAACTGCCACCAAGATGGAGGAAGAAGAAACCGCACCAAAAGGTGGAAAGAAGAGCAAAAAGAAGAAGAAGAAGGACGAAGAAGACGATGATGAAATCGAACGAATGATGGAGGAACTGGGATTGGAGTATTCTG-GTCAGAAGCCTCCTGCTTCGGCGGATAATCCAGGTTCTTCGCAAGATTCTCAGTCCACAGAGAAGCAGAGCAAGAAAAAAGATAAGAAGAAGAAAAAGGACGAAGCAAATGTTGATACGGTAGGTGACGCAACAACGGACGGTCAACCGGAAGTGGATGAAAGCGCACGTGGGAAAGTTACTACAGAAAAAAAGAAGGAAAAATCAAACGCTGCTAAAAAGGAGGAACCTGTTGCACCAGAGCCGGTTAGCGAGAAGCCGGGCAAGAAGAAGGGCAAAAAGACTGATCCCCCGTCGACGGCACCGGCCGAGGAAGGAAATGCTCCGTCCAAGAAGGGTGAGGCATCAAAGGGAGGATCAGCGAAAAAGCCTGAAGAGATACCCAAAGTGC]

[+] EMBL CNS097T9             [TCGTGCGTGTCGCCTATTCGTGGCTGCTGTAGTTGGTGCGGTGATCCTTATTGTGAATTTTTAGCACTCAACTTGTTGAATCGAACCTGTCTCACGTTGGGTCCGTGACCGTAAAAACCTAGGTTAACTGAACTCTCGCGAACGTCTGCAGTACTATGGGAAAGGCAAAGAAAGGGAAGAAGGAAGCAGCGGGTGCCGGTCTCGAGGACAAGTATGTATTTCAACCGAAGACTAGTGAAACTGAACGAAGTAGTCGGAGGGTCATTTTGTTCGGGTTGAGTGATCGGTATTTTTTTTATTTTATTTTAGTGCCAGCGATAACGATGGAGTCCCACAGACGGATATAACGGAAGTAGAGGTGGAAAATAGAAAGAATGATAAGAAATCTAAAAAGGAAAAGAGAGCCAAGAAAGCGGCTGTGGATAGCGACGAGGGTGAAGATGAAGTAACCGAGGTAACGGAACCAGTCAAAAAGACGGCTGTAACGAAGAAGAAGGAAAAGCCAACGACTGAAACGGAGCCAACAGAAGCGAACGATTCGGATGATGGTGGTAAAAGCAACAAGACCAAGGAAGCGAAGAAGAAAAAGTCTGCTAAATCTGGCCCCGTTGGATTTTCCCTGCTTATGATGGACGACGACGATGATGATGATAATGATGATGATGATGACGGAAGGGAGGAAGAGGAGCACGATCGCGAACAAGTGTCTCGCAAAAGCTCGATCGAAGAGGATGTTGGCCCTAAAGAAGGGGGCAAAGGAAAAAAGGGCAAGAAAGAAACTGCCACCAAGATGGAGGAAGAAGAAACCGCACCAAAAGGTGGAAAGAAGAGCAAAAAGAAGAAGAAGAAGGACGAAGAAGACGATGATGAAATCGAACGAATGATGGAGGAACTGGGATTGGAGTATTCTG GTCAGAAGCCTCCTGCTTCGGCGGATAATCCA                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS097TA             [                                                                                                                                                                                                                                                                                                                                                                                                      AAAGGAAAAGAGAGACAAGAAAGCGGCTGTGGATAGCGACGAGGGTGAAGATGAAGTAACCGAGGTAACGGAACCAGTCAAAAAAACGGCTGTAACGAAGAAGAAGGAAAAGCCAACGACTGAAACGGAGCCAACAGAAGCGAACGATTCGGATGATGGTGGTAAAAGCAACAAGACCAAGGAAGCGAAGAAGAAAAAGTCTGCTAAATCTGGCCCCGTTGGATTTTCCCTGCTTATGATGGACGACGACGATGATGATGATAATGATGATGATGATGACGGAAGGGAGGAAGAGGAGCACGATCGCGAACAAGTTTCTCGCAAAAGCTCGATCGAAGAGGATGTTGGCCCTAAAGAAGGGGGCAAAGGAAAAAAGGGCAAGAAAGAAACTGCCACCAAGATGGAGGAAGAAGAAACCGCACCAAAAGGTGGAAAGAAGAGCAAAAAGAAGAAGAAGAAGGACGAAGAAGACGATGATGAAATCGAACGAATGATGGAGGGACTGGGATTGGAGTATTCTG GTCAGAAGCCTCCTGCTTCGGCGGATAATCCAGGTTCTTCGCAAGATTCTCAGTCCACAGAGAAGCAGAGCAAGAAAAAAGATAAGAAGAAGAAAAAGGACGAAGCAAATGTTGATACGGTAGGTGACGCAACAACGGACGGTCAACCGGAAGTGGATGAAAGCGCACGTGGGAAAGTTACTACAGAAAAAAAGAAGGAAAAATCAAACGCTGCTAAAAAGGAGGAACCTGTTGCACCAGAGCCGGTTAGCGAGAAGCCGGGCAAGAAGAAGGGCAAAAAGACTGATCCCCCGTCGACGGCACCGGCCGAGGAAGGAAATGCTCCGTCCAAGAAGGGTGAGGCATCAAAGGGAGGATCAGCGAAAAAGCCTGAAGAGATACCCAAAGTGC]
[+] EMBL CNS09IAT             [                                                                                                                                                                                                                                                                                                                                                                                                                                  GTGGATAGCGACGAGGGTGAAGATGAAGTAACCGAGGTAACGGAACCAGTCAAAAAAACGGCTGTAACGAAGAAGAAGGAAAAGCCAACGACTGAAACGGAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09IAU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGCCAACAGAAGCGAACGATTCGGATGATGGTGGTAAAAGCAACAAGACCAAGGAAGCGAAGAAGAAAAAGTCTGCTAAATCTGGCCCCGTTGGATTTTCCCTGCTTTTGATGGACGACGACGATGATGATGATAATGATGATGATGATGACGGAAGGGAGGAAGAGGAGCACGATCGCGAACAAGTATCTCGCAAAAGCTCGGTCGAAGAGGATGTTGGCCCTAAAGAAGGGGGCAAAGGAAAAAAGGGCAAGAAAGAAACTGCCACCAAGATGGAGGAAGAAGAAACCGCACCAAAAGGTGGAAAGAAGAGCAAAAAGAAGAAGAAGAAGGACGAAGAAGACGATGATGAAATCGAACGAATGATGGAGGAACTGGGATTGGAGTATTCTGAGTCAGAAGCCTCCTGCTTCGGCGGATAATCCAAGTT                                                                                                                                                                                                                                                                                                                                                                  ]


>consensus_5601#0 TCGTGCGTGTCGCCTATTCGTGGCTGCTGTAGTTGGTGCGGTGATCCTTATTGTGAATTT TTAGCACTCAACTTGTTGAATCGAACCTGTCTCACGTTGGGTCCGTGACCGTAAAAACCT AGGTTAACTGAACTCTCGCGAACGTCTGCAGTACTATGGGAAAGGCAAAGAAAGGGAAGA AGGAAGCAGCGGGTGCCGGTCTCGAGGACAAGTATGTATTTCAACCGAAGACTAGTGAAA CTGAACGAAGTAGTCGGAGGGTCATTTTGTTCGGGTTGAGTGATCGGTATTTTTTTTATT TTATTTTAGTGCCAGCGATAACGATGGAGTCCCACAGACGGATATAACGGAAGTAGAGGT GGAAAATAGAAAGAATGATAAGAAATCTAAAAAGGAAAAGAGAGCCAAGAAAGCGGCTGT GGATAGCGACGAGGGTGAAGATGAAGTAACCGAGGTAACGGAACCAGTCAAAAAAACGGC TGTAACGAAGAAGAAGGAAAAGCCAACGACTGAAACGGAGCCAACAGAAGCGAACGATTC GGATGATGGTGGTAAAAGCAACAAGACCAAGGAAGCGAAGAAGAAAAAGTCTGCTAAATC TGGCCCCGTTGGATTTTCCCTGCTTATGATGGACGACGACGATGATGATGATAATGATGA TGATGATGACGGAAGGGAGGAAGAGGAGCACGATCGCGAACAAGTGTCTCGCAAAAGCTC GATCGAAGAGGATGTTGGCCCTAAAGAAGGGGGCAAAGGAAAAAAGGGCAAGAAAGAAAC TGCCACCAAGATGGAGGAAGAAGAAACCGCACCAAAAGGTGGAAAGAAGAGCAAAAAGAA GAAGAAGAAGGACGAAGAAGACGATGATGAAATCGAACGAATGATGGAGGAACTGGGATT GGAGTATTCTGGTCAGAAGCCTCCTGCTTCGGCGGATAATCCAGGTTCTTCGCAAGATTC TCAGTCCACAGAGAAGCAGAGCAAGAAAAAAGATAAGAAGAAGAAAAAGGACGAAGCAAA TGTTGATACGGTAGGTGACGCAACAACGGACGGTCAACCGGAAGTGGATGAAAGCGCACG TGGGAAAGTTACTACAGAAAAAAAGAAGGAAAAATCAAACGCTGCTAAAAAGGAGGAACC TGTTGCACCAGAGCCGGTTAGCGAGAAGCCGGGCAAGAAGAAGGGCAAAAAGACTGATCC CCCGTCGACGGCACCGGCCGAGGAAGGAAATGCTCCGTCCAAGAAGGGTGAGGCATCAAA GGGAGGATCAGCGAAAAAGCCTGAAGAGATACCCAAAGTGC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)