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Anopheles gambiae
cluster # 5649 cluster # 5649       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5649#0 length = 1222 sequences # 4  

consensusID : consensus_5649#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1222
fasta sequence
                              [ACAAACACGAACGCGAATGAGGTTCATCCAAATAGCCAGCATCATCTAAATGAGCATCATCATCACTAAAAGGAAACTGATCTACCACATCTAAGTACACATACACACAAGCGACTGCAGCCACACGACGGTGCAGAAACTCACTCACGTGCTTTACCACAATTGGCCAATTAGGGCAACTGCATGAGAAACTCCGCTCATCGTACAGACACCGCTGCCGATCACGCACGAGAAAGACACAGTTCGTGTGTATATGTGGCTTAGTAGTTGGGTTATCCA-GTGCGTGGTTTTAGCGTGAGATCGTGTTCGCGTGTAATGTAACCACACATTCGAATGGAAAATGATCCTCTCCGAGAGACACAACCCATTCCCAACCATCATGTCACCACCGAAGCTGCGTGTGGTTGTTGT---TGTTGTTGCTGTTGCT-GACCCAGCTAATCATCTACCGGAGTCGGAGCGTTTAAGAATGCCGAAAGTTTTGATACGAAGTATCCTCGCACGTGGACGGCAGCAGAGATGAGCTTAAAACGATCGGCCACCATTTTTTGTTTGTTTGTTTTTAGCGTTACGTCATTATTTTATTTAGTGTTTAGCTTAAAGGGTAGCTAGCGTAGGACGCGATACGCACACGTAAATATATGTGTATTATGTTATCATTAATCGGTGGACAGTGTGTGACGTGAAATAGGGCAGGAGAGCTGTAG-AACGCCAGAC----AGAGAGAGAGGCCACGTCACGCACACAAGTATGATAATCCCCACCCCAATCTCACTATGGCCAGTTAGTAGGGTAGGTGCGTGCCGTGCCGAGAGGATAAGCCGAGACCGACGACTTTCCTTCTTCGAACAGGGTTAACAAAGCACACATGGTCG---CTGCTGCTGCTGCTGCTATCTAAGCTCTTGTAACAGCGTAACTTTCCCGCACAGGGTTTTTGCGCTAATCCCCAGGCAGGCGACGGCCGGGTAATTCGAGCCGGAGGAGCAGTTTAGAACGCGAAAGGTCATGCACACAAACACATAAAGTGCACCACCGAAGCCAAATAATGAAATAGATAAATAAACGATGAAAGCGAGAGACAGCGACCCCGCCGCCGGACCGCGTTTTGTTACAAACAGCATGTACAGGCAATAACGCAACTAGACTGCGCGGAAAAGGGAACAGAGAGCCCCCCCGGGGGGAGGGCACGCGAGAGACGCAGGACGTGTAGAAAATATAGCATACAATC]

[+] EMBL CNS08LNU             [ACAAACACGAACGCGAATGAGGTTCATCCAAATAGCCAGCATCATCTAAATGAGCATCATCATCACTAAAAGGAAACTGATCTACCACATCTAAGTACACATACACACAAGCGACTGCAGCCACACGACGGTGCAGAAACTCACTCACGTGCTTTACCACAATTGGCCAATTAGGGCAACTGCATGAGAAACTCCGCTCATCGTACAGACACCGCTGCCGATCACGCACGAGAAAGACACAGTTCGTGTGTATATGTGGCTTAGTAGTTGGGTTATCCACGTGCGTGGTTTTAGCGTGAGATCGTGTTCGCGTGTAATGTAACCACACATTCGAATGGAAAATGATCCTCTCCGAGAGACACAACCCATTCCCAACCATCATGTCACCACCGAAGCTGCGTGTGGTTGTTGTTGCTGTTGTTGCTGTTGCTGGGCCCAGCTAATCATCTACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX629005             [                                                                                           cacaTATACATACACACAAGCGACTGCAGCCACACGACGGTGCAGAAACTCACTCACGTGCTTTACCACAATTGGCCAATTAGGGCAACTGCATGAGAAACTCCGCTCATCGTACAGACACCGCCGCCGATCACGCACGGGAAAGACACAGTCTGTGTGTATCTGTGTCTTAGTCGTTGGGTTATCCA GTGCGTGGTTTTAGCGTGAGATCGTGTTCGCGTGTAATGTAACCACACATTCGAATGGAAAATGATCCTCTCCGAGAGACACCACCCATTCCCAACCATCATGTCACCACCGAAGCTGCGTGTGGTTGTTGT   TGTTGTTGCTGTTGCT GACCCAGCTAATCATCTACCGGAGTCGGAGCGTTTAAGAATGCCGAAAGTTTTGATACGAAGTATCCTCGCACGTGGACGGCAGCAGAGATGAGCTTAAAACGATCGGCCACCATTTTTTGTTTGTTTGTTTTTAGCGTTACGTCATTATTTTATTTAGTGTTTAGCTTAAAGGGTAGCTAGCGTAGGACGCGATACGCACACGTAAATATATGTGTATTATGTTATCATTAATCGGTGGACAGTGTGTGACGTGAAATAGGGCAGGAGAGCTGTAG AACGCCAGAC    AGAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM589470             [                                                                                                                                                                                                                                                                                                                                                                                                       ccgGCTGCGTGTGGTTGTTGT   TGTTGTTGCTGTTGCT GACCCAGCTAATCATCTACCGGAGTCGGAGCGTTTAAGAATGCCGAAAGTTTTGATACGAAGTATCCTCGCACGTGGACGGCAGCAGAGATGAGCTTAAAACGATCGGCCACCATTTTTTGTTTGTTTGTTTTTAGCGTTACGTCATTATTTTATTTAGTGTTTAGCTTAAAGGGTAGCTAGCGTAGGACGCGATACGCACACGTAAATATATGTGTATTATGTTATCATTAATCGGTGGACAGTGTGTGACGTGAAATAGGGCAGGAGAGCTGTAG AACGCCAGAC    AGAGAGAGAGGCCACGTCACGCACACAAGTATGATAATCCCCACCCCAATCTCACTATGGCCAGTTAGTAGGGTAGGTGCGTGCCGTGCCGAGAGGATAAGCCGAGACCGACGACTTTCCTTCTTCGAACAGGGTTAACAAAGCACACATGGTCG   CTGCTGCTGCTGCTGCTATCTAAGCTCTTGTAACAGCGTAACTTTCCCGCACAGGGTTTTTGCGCTAATCCCCAGGCAGGCGACGGCCGGGTAATTCGAGCCGGAGGAGCAGTTTAGAACGCGAAAGGTCATGCACACAAACACATAAAGTGCACCACCGAAGCCAAATAATGAAA                                                                                                                                                                                 ]
[-] EMBL CNS08LNV             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GTAGGACGCGATACGCACACGTAAATATATGTGTATTATGTTATCATTAATCGGTGGGCAGTGTGTGACGTGAAATAGGGCAGGAGAGTTGTAGAAACGCCAGACAGAGAGAGAGAGAGGACACGTCCCGTACACAAGTATGATAATCCCCACCCCATTCTCACTTTGGCCAGTTAGTAGGGTAGGTGCGTGCCGTGCCGAGAGGATAAGCCGAGACCGACGACTTTCCTTCTTCGCACAGGGTTAACAAAGCACACATGGTCGCTACTGCTGCTGCTGCTGCTATCTAAGCTCTTGTAACAGCGTAACTTTCCCGCACAGGGTTTTTGCGCTAATCCCCAGGCAGGCGACGGCCGGGTAATTCGAGCCGGAGGAGCAGTTTAGAACGCTAAAGGTCATGCACACAAACACATAAAGTGCACCACCGAAGCCAAATAATGAAATAGATAAATAAACGATGAAAGCGAGAGACAGCGACCCCGCCGCCGGACCGCGTTTTGTTACAAACAGCATGTACAGGCAATAACGCAACTAGACTGCGCGGAAAAGGGAACAGAGAGCCCCCCCGGGGGGAGGGCACGCGAGAGACGCAGGACGTGTAGAAAATATAGCATACAATC]


>consensus_5649#0 ACAAACACGAACGCGAATGAGGTTCATCCAAATAGCCAGCATCATCTAAATGAGCATCAT CATCACTAAAAGGAAACTGATCTACCACATCTAAGTACACATACACACAAGCGACTGCAG CCACACGACGGTGCAGAAACTCACTCACGTGCTTTACCACAATTGGCCAATTAGGGCAAC TGCATGAGAAACTCCGCTCATCGTACAGACACCGCTGCCGATCACGCACGAGAAAGACAC AGTTCGTGTGTATATGTGGCTTAGTAGTTGGGTTATCCAGTGCGTGGTTTTAGCGTGAGA TCGTGTTCGCGTGTAATGTAACCACACATTCGAATGGAAAATGATCCTCTCCGAGAGACA CAACCCATTCCCAACCATCATGTCACCACCGAAGCTGCGTGTGGTTGTTGTTGTTGTTGC TGTTGCTGACCCAGCTAATCATCTACCGGAGTCGGAGCGTTTAAGAATGCCGAAAGTTTT GATACGAAGTATCCTCGCACGTGGACGGCAGCAGAGATGAGCTTAAAACGATCGGCCACC ATTTTTTGTTTGTTTGTTTTTAGCGTTACGTCATTATTTTATTTAGTGTTTAGCTTAAAG GGTAGCTAGCGTAGGACGCGATACGCACACGTAAATATATGTGTATTATGTTATCATTAA TCGGTGGACAGTGTGTGACGTGAAATAGGGCAGGAGAGCTGTAGAACGCCAGACAGAGAG AGAGGCCACGTCACGCACACAAGTATGATAATCCCCACCCCAATCTCACTATGGCCAGTT AGTAGGGTAGGTGCGTGCCGTGCCGAGAGGATAAGCCGAGACCGACGACTTTCCTTCTTC GAACAGGGTTAACAAAGCACACATGGTCGCTGCTGCTGCTGCTGCTATCTAAGCTCTTGT AACAGCGTAACTTTCCCGCACAGGGTTTTTGCGCTAATCCCCAGGCAGGCGACGGCCGGG TAATTCGAGCCGGAGGAGCAGTTTAGAACGCGAAAGGTCATGCACACAAACACATAAAGT GCACCACCGAAGCCAAATAATGAAATAGATAAATAAACGATGAAAGCGAGAGACAGCGAC CCCGCCGCCGGACCGCGTTTTGTTACAAACAGCATGTACAGGCAATAACGCAACTAGACT GCGCGGAAAAGGGAACAGAGAGCCCCCCCGGGGGGAGGGCACGCGAGAGACGCAGGACGT GTAGAAAATATAGCATACAATC



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)