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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5665#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 760 fasta sequence
[GACCCACGCGTCCGGCAAGCTAAGATGAGGCATTTAGCCAGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTTGGTCCAAAGCATATTCGCGCTGGGCAGAATTACACCGTCATTTTGAGTAGTTTTGAGTCCAATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGCCTGTCAGCTGGTGGCAAGAAGCTACTGCACCTCGGTCAACCCACCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTTCCGCTGCCCGAAAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGATTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACCGCCCTGGTGCAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTGGGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCACAGCGCAATGTCATTCGCCGATGGACCGCGGTCAGCCTGCAGCTCGGTGTGTTTGAGGAGCAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGTCACGGGAGCGAATGAAATCGTCTCGAAAACGTTCGACGTTAGGGAGTACGTGCTTCCGGCGTTCGAGGTGGCAGTGCAGGCGCGCGCTGTTCCGCTGGAAAAGCACCAGCGCCTTAATCTGACAC]
[+] EMBL BM648345 [GACCCACGCGTCCGGCAAGCTAAGATGAGGCATTTAGCCAGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTTGGTCCAAAGCATATTCGCGCTGGGCAGAATTACACCGTCATTTTGAGTAGTTTTGAGTCCAATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGCCTGTCAGCTGGTGGCAAGAAGCTACTGCACCTCGGTCAACCCACCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTTCCGCTGCCCGAAAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGATTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACCGCCCTGGTGCAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTGGGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCACAGCGCAATGTCATTCGCCGATGGACCGCGGTCAGCCTGCAGCTCGGTGTGTTTGAGGAGCAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGT ]
[+] EMBL BM591261 [ ccgATTTCGTTCATGGAATTCTTATTGTTGGTCCAAAGCATATTCGCGCTGGGCAGAACTACACCGTCATTTTGAGTAGTTTTGAGTCCAATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGACTGTCATCTAGTGGCAAGAAGCTACTGCACCTCGGTCAACCCGCCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTTCCGCTGCCCGAAAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGATTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACCGCCCTGGTGCAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTGGGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCACAGCGCAATGTCATTCGCCGATGGACCGCGGTCAGCCTGCAGCTCGGTGTGTTTGAGGAGCAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGTCACGGGAGCGAATGAAATCGTCTCGAAAACGTTCGACGTTAGGGAGTACGTGCTTCCGGCGTTCGAGGTGGCAGTGCAGGCGCGCGCTGTTCCGCTGGAAAAGCACCAGCGCCTTAATCTGACAC]
consensusID : consensus_5665#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 679 fasta sequence
[CCGGCCAGCTGGAACAGATTTATTTCCGAGAGGGTGCAAGCTAAGATGAGGCATTTAGCCAGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTTGGTCCAAAGCATATTCGCGCTGGACAGAACTACACCGTCATTTTGAGTAGTTTTGAGTCCAATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGCCTGTCATCTAGTGGCAAGAAGCTACTGCACCTCGGTCAACCCGCCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTTCCGCTGCCCGATAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGATTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACTGCTCTGGTGCAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTGGGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCACAGCGCAATGTCATTCGCCGATGGACCGCGATCAGCCTGCAGCTCGGTGTGTTTGAGGAGCAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGTCACGGGAGCGAATGAAATCGTCT]
[+] EMBL BM609329 [CCGGCCAGCTGGAACAGATTTATTTCCGAGAGGGTGCAAGCTAAGATGAGGCATTTAGCCAGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTTGGTCCAAAGCATATTCGCGCTGGACAGAACTACACCGTCATTTTGAGTAGTTTTGAGTCCAATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGCCTGTCATCTAGTGGCAAGAAGCTACTGCACCTCGGTCAACCCGCCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTTCCGCTGCCCGATAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGATTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACTGCTCTGGTGCAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTGGGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCACAGCGCAATGTCATTCGCCGATGGACCGCGATCAGCCTGCAGCTCGGTGTGTTTGAGGAGCAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGTCACGGGAGCGAATGAAATCGTCT]
[+] EMBL BM625642 [CCGGCCAGCTGGAACAGGTTTATTTCCGAGAGGGTGCAAGCTAAGATGAGGCATTTAGCCAGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTTGGTCCAAAGCATATTCGCGCTGGACAGAACTACACCGTCATTTTGAGTAGTTTTGAATCCAATACGAACGAGCAGAACCTTCTACTTCAACTCGACGGCCTGTCATCTAGTGGCAAGAAGCTACTGCACCTCGGTCAACCCGCCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTTCCGCTGCCCGAAAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGATTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACCGCTCTGGTGCAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTGGGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCACAGCGCAATGTCATTCGCCGATGGACCGCGGTCAGCCTGCAGCTCGGTGTGTTTGAGGAGCAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACAC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5665#0 --------------------GACCCACGCGTCCG-GCAAGCTAAGATGAGGCATTTAGCC 39
consensus_5665#1 CCGGCCAGCTGGAACAGATTTATTTCCGAGAGGGTGCAAGCTAAGATGAGGCATTTAGCC 60
* ** * * *************************
consensus_5665#0 AGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTT 99
consensus_5665#1 AGCGCCAGCTTGTTAGTGATAACGCTGTTGATTAATTTCGTTCATGGAATTCTTATTGTT 120
************************************************************
consensus_5665#0 GGTCCAAAGCATATTCGCGCTGGGCAGAATTACACCGTCATTTTGAGTAGTTTTGAGTCC 159
consensus_5665#1 GGTCCAAAGCATATTCGCGCTGGACAGAACTACACCGTCATTTTGAGTAGTTTTGAGTCC 180
*********************** ***** ******************************
consensus_5665#0 AATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGCCTGTCAGCTGGTGGCAAGAAG 219
consensus_5665#1 AATACGAACGAGCGGAACCTTCTCCTTCAACTCGACGGCCTGTCATCTAGTGGCAAGAAG 240
********************************************* ** ***********
consensus_5665#0 CTACTGCACCTCGGTCAACCCACCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTT 279
consensus_5665#1 CTACTGCACCTCGGTCAACCCGCCCGCGTGCAGCCGCTCTCAAACAGCGTGATTAGCTTT 300
********************* **************************************
consensus_5665#0 CCGCTGCCCGAAAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGA 339
consensus_5665#1 CCGCTGCCCGATAGCCTGCCAGCCGGAAGCTATAAATTAACCATCGATGGACAGAACGGA 360
*********** ************************************************
consensus_5665#0 TTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACCGCCCTGGTG 399
consensus_5665#1 TTTAAGTTTCACCGGGAAGCGGATTTGCTGCTCGCTGCGAGTACCACCACTGCTCTGGTG 420
************************************************** ** ******
consensus_5665#0 CAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTG 459
consensus_5665#1 CAGCTCAGCAAACCCATCTACAAGCCCGGTGACGTGCTGCAGTTCCGTGTGATCGTGCTG 480
************************************************************
consensus_5665#0 GGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCA 519
consensus_5665#1 GGCGGTGATCTAAAGCCACCGGCACCCTCCGTCACCGCCACCGTAATCGTGCACGATCCA 540
************************************************************
consensus_5665#0 CAGCGCAATGTCATTCGCCGATGGACCGCGGTCAGCCTGCAGCTCGGTGTGTTTGAGGAG 579
consensus_5665#1 CAGCGCAATGTCATTCGCCGATGGACCGCGATCAGCCTGCAGCTCGGTGTGTTTGAGGAG 600
****************************** *****************************
consensus_5665#0 CAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGTCACG 639
consensus_5665#1 CAGCTCCAAATCGGAACCGTTCCGCTGCTGGGCCGCTACACAATCACCGTCACGGTCACG 660
************************************************************
consensus_5665#0 GGAGCGAATGAAATCGTCTCGAAAACGTTCGACGTTAGGGAGTACGTGCTTCCGGCGTTC 699
consensus_5665#1 GGAGCGAATGAAATCGTCT----------------------------------------- 679
*******************
consensus_5665#0 GAGGTGGCAGTGCAGGCGCGCGCTGTTCCGCTGGAAAAGCACCAGCGCCTTAATCTGACA 759
consensus_5665#1 ------------------------------------------------------------
consensus_5665#0 C 760
consensus_5665#1 -
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||