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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5683#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence
[AATCGNGCACGAGGNGTACGTGTTCCGATGTTTAGGAATGCGGCTTGGGTATCTACGATGACGTCAAAGGATTTGACGTGGATAAGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCGTTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTTACCTAATCTTAAATCAGTGTCAGGGGTAACACCATTACGAATAGCCTAAATCAGCAACTTAACGAAATACGCTGGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTTTCTATTGTGTGTGGTGGTTGGTTGTTTCTATATGTTAGAAATTGGTTCTTATGTTTTTGTTTATCACTATTGTATCACAACACAAGTAAGACAAAAGGTTTCACGCAGTTCGTTTGTGAAACAAGTTAATCAAGTTAAACCAGTTTACTGTAGAGCACTGTGTTTTGCGTATGAGGGTCTATCGGTATTCGTCGTTATTATGAATGATCTGAGTAACTGTAATTGGCGTACAAATTTGCAATACTCTTATGTTTGAAAGTGTAAGGTACACGAAAAACACTAAAGGTTTATTCAAATGTGCCTCTTATGTTTCACAAGCTATCACCGAAAAACCAATTTA]
[+] EMBL BX469474 [AATCGNGCACGAGGNGTACGTGTTCCGATGTTTAGGAATGCGGCTTGGGTATCTACGATGACGTCAAAGGATTTGACGTGGATAAGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCGTTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTTACCTAATCTTAAATCAGTGTCAGGGGTAACACCATTACGAATAGCCTAAATCAGCAACTTAACGAAATACGCTGGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTTTCTATTGTGTGTGGTGGTTGGTTGTTTCTATATGTTAGAAATTGGTTCTTATGTTTTTGTTTATCACTATTGTATCACAACACAAGTAAGACAAAAGGTTTCACGCAGTTCGTTTGTGAAACAAGTTAATCAAGTTAAACCAGTTTACTGTAGAGCACTGTGTTTTGCGTATGAGGGTCTATCGGTATTCGTCGTTATTATGAATGATCTGAGTAACTGTAATTGGCGTACAAATTTGCAATACTCTTATGTTTGAAAGTGTAAGGTACACGAAAAACACTAAAGGTTTATTCAAATGTGCCTCTTATGTTTCACAAGCTATCACCGAAAAACCAATTTA]
consensusID : consensus_5683#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 645 fasta sequence
[CCGCTTTTATTCAACAGCATGGCACCTGTCAGATATCATTTCGTGCTGTGGCTATTAATTCTGATTGGCGTTAGTAGTCTAGTACCGCCTGGCGAGTGCTTGGACATATCTAAGGTTACGCTGGATGCTGCATTCTATCCCCTGTTTGGTTGTGCTCGCGATTTGGTTGTCCCCGAGGATTTAATCGAGCTGTACAAGAAACGCATCTTTCCCGACGATCAGTTAACATGCTGCGTGTTCCGATGTTTAGGAATGCGGCTTGGTATCTACGATGACGTCAAAGGATTTGACGTGGATAAGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCGTTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTTACCTAATCTTAAATCAGTGTCAGGGTAACACCATTACGAATAGCCTAAATCAGCAACTTAACGAAATACGCTGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTTTCTATTGTGTGTGGGGGGGTTGGGTTGTTTCTTTTGTTAGAAATTGGGTCCTTTGGTTTTTGGTTTCACTATTGTATCACAACACAAGTAAGACAAAGGGTTCAGCAGT]
[+] EMBL BM593347 [CCGCTTTTATTCAACAGCATGGCACCTGTCAGATATCATTTCGTGCTGTGGCTATTAATTCTGATTGGCGTTAGTAGTCTAGTACCGCCTGGCGAGTGCTTGGACATATCTAAGGTTACGCTGGATGCTGCATTCTATCCCCTGTTTGGTTGTGCTCGCGATTTGGTTGTCCCCGAGGATTTAATCGAGCTGTACAAGAAACGCATCTTTCCCGACGATCAGTTAACATGCTGCGTGTTCCGATGTTTAGGAATGCGGCTTGGTATCTACGATGACGTCAAAGGATTTGACGTGGATAAGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCGTTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTTACCTAATCTTAAATCAGTGTCAGGGTAACACCATTACGAATAGCCTAAATCAGCAACTTAACGAAATACGCTGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTTTCTATTGTGTGTGGGGGGGTTGGGTTGTTTCTTTTGTTAGAAATTGGGTCCTTTGGTTTTTGGTTTCACTATTGTATCACAACACAAGTAAGACAAAGGGTTCAGCAGT]
[+] EMBL BX626221 [ TCAACAGCATGGCACCTGTCAGATATCATTTCGTGCTGTGGCTATTAATTCTGATTGGCGTTAGTAGTCTAGTACCGCCTGGCGAGTGCTTGGACATATCTAAGGTTACGCTGGATGCTGCATTCTATCCCCTGTTTGGTTGTGCTCGCGATTTGGTTGTCCCCGAGGATTTAATCGAGCTGTACAAGAAACGCATCTTTCCCGACGATCAGTTAACATGCTGCGTGTTCCGATGTTTAGGAATGCGGCTTGGTATCTACGATGACGTCAAAGGATTTGACGTGGATAAGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCGTTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTTACCTAATCTTAAATCAGTGTCAGGGTAACACCATTACGAATAGCCTAAATCAGCAACTTAACGAAATACGCTGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAG ]
[+] EMBL BX622693 [ AGATATCATTTCGTGCTGTGGCTATTAATTCTGATTGGCGTTAGTAGTCTAGTACCGCCTGGCGAGTGCTTGGACATATCTAAGGTTACGCTGGATGCTGCATTCTATCCCCTGTTTGGTTGTGCTCGCGATTTGGTTGTCCCCGAGGATTTAATCGAGCTGTACAAGAAACGCATCTTTCCCGACGATCAGTTAACATGCTGCGTGTTCCGATGTTTAGGAATGCGGCTTGGTATCTACGATGACGTCAAAGGATTTGACGTGGATAAGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCGTTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTTACCTAATCTTAAATCAGTGTCAGGGTAACACCATTACGAATAGCCTAAATCAGCAACTTAACGAAATACGCTGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTTTCTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5683#0 ------------------------------------------------------------
consensus_5683#1 CCGCTTTTATTCAACAGCATGGCACCTGTCAGATATCATTTCGTGCTGTGGCTATTAATT 60
consensus_5683#0 ------------------------------------------------------------
consensus_5683#1 CTGATTGGCGTTAGTAGTCTAGTACCGCCTGGCGAGTGCTTGGACATATCTAAGGTTACG 120
consensus_5683#0 ------------------------------------------------------------
consensus_5683#1 CTGGATGCTGCATTCTATCCCCTGTTTGGTTGTGCTCGCGATTTGGTTGTCCCCGAGGAT 180
consensus_5683#0 ------------------------------------AATCGNGCACGAGGNGTACGTGTT 24
consensus_5683#1 TTAATCGAGCTGTACAAGAAACGCATCTTTCCCGACGATCAGTTAACATGC-TGCGTGTT 239
*** * * * * ******
consensus_5683#0 CCGATGTTTAGGAATGCGGCTTGGGTATCTACGATGACGTCAAAGGATTTGACGTGGATA 84
consensus_5683#1 CCGATGTTTAGGAATGCGGCTTGG-TATCTACGATGACGTCAAAGGATTTGACGTGGATA 298
************************ ***********************************
consensus_5683#0 AGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCG 144
consensus_5683#1 AGCAGTACGAACGAGTGAAAGACCGGCTGTCGGTTGACGAGGACACATACAAGCGTGGCG 358
************************************************************
consensus_5683#0 TTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTT 204
consensus_5683#1 TTAAGAACTGCATCAGGAATGTACTGCGAGGCCGTACGCTGAACAACTGCGAAAAAGCTT 418
************************************************************
consensus_5683#0 ACCTAATCTTAAATCAGTGTCAGGGGTAACACCATTACGAATAGCCTAAATCAGCAACTT 264
consensus_5683#1 ACCTAATCTTAAATCAGTGTCAGGG-TAACACCATTACGAATAGCCTAAATCAGCAACTT 477
************************* **********************************
consensus_5683#0 AACGAAATACGCTGGTAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTT 324
consensus_5683#1 AACGAAATACGCTG-TAATTAAATGTGTTATGAATTGTTTCTCTCTTGAAGCAAATGGTT 536
************** *********************************************
consensus_5683#0 TCTATTGTGTGTGGTGG---TTGGTTGTTTCTATATGTTAGAAATTGGTTCTTATGTTTT 381
consensus_5683#1 TCTATTGTGTGTGGGGGGGTTGGGTTGTTTCT-TTTGTTAGAAATTGGGTCCTTTGGTTT 595
************** ** * ********** * ************* ** * ** ***
consensus_5683#0 TGTTTATCACTATTGTATCACAACACAAGTAAGACAAAAGGTTTCACGCAGTTCGTTTGT 441
consensus_5683#1 TTGGTTTCACTATTGTATCACAACACAAGTAAGACAAAGGGTTC--AGCAGT-------- 645
* * ******************************** **** *****
consensus_5683#0 GAAACAAGTTAATCAAGTTAAACCAGTTTACTGTAGAGCACTGTGTTTTGCGTATGAGGG 501
consensus_5683#1 ------------------------------------------------------------
consensus_5683#0 TCTATCGGTATTCGTCGTTATTATGAATGATCTGAGTAACTGTAATTGGCGTACAAATTT 561
consensus_5683#1 ------------------------------------------------------------
consensus_5683#0 GCAATACTCTTATGTTTGAAAGTGTAAGGTACACGAAAAACACTAAAGGTTTATTCAAAT 621
consensus_5683#1 ------------------------------------------------------------
consensus_5683#0 GTGCCTCTTATGTTTCACAAGCTATCACCGAAAAACCAATTTA 664
consensus_5683#1 -------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||