Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5733 cluster # 5733       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5733#0 length = 994 sequences # 4  

consensusID : consensus_5733#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 994
fasta sequence
                              [CCGCAAAAACAACGGAAGGGAACCCAAAATGCGATGACGACGGTGATGATGATGATGATGAGAGTAAGGGTGACGAAAGTGTGACTGAAAAGGGAGAACAGTTTATAAGGGCGATGAGTCCCTTTTCTAGCGATTATATGAAAATTTCGTTTACGACCGCCGCGCACGTAGCTTTAGTGGAAGGAAGGAGTTTATTTCGTTTTATTATTTTCTTATTTGCCCCATTAACTTTATACTTACGCTAATAGTTGCTCTTTTATATTTTGTGCTGTTTTTTTTTTAATTATTTCCTTTTATTCCCAATTATGAACGTGCCGAGGTTTGAAAGGCTCTGGAAGAAGGGCGCTTGTCCTGTTCTCCATGTACGTAAAACATGGCAATTCCCTCTTTCCGCGTGTAGAAATTCTGTGTAAAATGTATCCAACACTGTATCTGTATAAACAAAATCCTCAAACTCTAATGACCGCTCGCCCACGGGCGTGTAGGGACAGGGAAAACGTAGGGACAGAAGAAAATAGAAGCAAATGAATTGTTAATAGTACGCGCACCACCACCACCACCACACACAAACATTATGGCTTAGTTGCGTAAAGCAAAACACTCAATGGCAAGTGTTGGCGGATTAAGAATGTAAGACAAAGCGTACTGTTTGAAATTGTCCTTCGTTTAACACAGGTTGCTTTGTTTCTTTTTGGGTTAGGCTTAAACACATTTTGTATGATCATTACTTTTAATTTAAGCCGACCGGCGGCTGCCCCGTTGCGTCGGGCTGGCTTCGGGCAAACGATTGTGTGTGGGGGACCGTACACATACGACGGGGGGAGACACGGACACACGTGTGCCACACGCATGGCGCTGTGTACGACGCCCCTTTCGTAATGTAAACGCGCTTCCACACACTACACATTCTAGCAAGAAGTGCGCGCAACGAGAGACGAACAATAAGCGCGCGTAAGGTGGTTTTAGTGGCGTTGTAATCGAATGAAAATAATAA]

[+] EMBL BM600879             [CCGCAAAAACAACGGAAGGGAACCCAAAATGCGATGACGACGGTGATGATGATGATGATGAGAGTAAGGGTGACGAAAGTGTGACTGAAAAGGGAGAACAGTTTATAAGGGCGATGAGTCCCTTTTCTAGCGATTATATGAAAATTTCGTTTACGACCGCCGCGCACGTAGCTTTAGTGGAAGGAAGGAGTTTATTTCGTTTTATTATTTTCTTATTTGCCCCATTAACTTTATACTTACGCTAATAGTTGCTCTTTTATATTTTGTGCTGTTTTTTTTTTAATTATTCCCTTTTATTCCCAATTATGAACGTGCCGAGGTTTGAAAGGCTCTGGAAGAAGGGCGCTTGTCCTGTTCTCCATGTACGTAAAACATGGCAATTCCCTCTTTCCGCGTGTAGAAATTCTGTGTAAAATGTATCCAACACTGTATCTGTATAAACAAAATCCTCAAACTCTAATGACCGCTCGCCCACGGGCGTGTAGGGACAGGGAAAACGTAGGGACAGAAGAAAATAGAAGCAAATGAATTGTTAATAGTACGCGCACCACCACCACCACCACACACAAACATTATGGCTTAGTTGCGTAAAGCAAAACACTCAATGGCAAGTGTTGGCGGATTAAGAATGTAAGACAAAGCGTACTGTTTGAAATTGTCCTTCGTTTAACACAGGTTGCTTTGTTTCTTTTTG                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX625501             [                                tagGACGACGGTGATGATGATGATGATGAGGGTGAGGATGACGAAAGTGTGACTGAAAAGGGAGAACAGTTTATAAGGGCGATGAGTCCCTTTTCTAGCGATTATATGAAAATTTCNTTTACGACCGCCGCGCACGTAGCTTTAGTGGAAGGAAGGAGTTTATTTCGTTTTATTATTTTCTTATTTGCCCCATTAACTTTATACTTACGCTAATAGTTGCTCTTTTATATTTTGTGCTG TTTTTTTTTAATTATTTCCTTCTATTCCCAATTATGAACGTGCCGAGGTTTGACAGGCTCTGGAAGAAGGGCGCTTGNCCTGTTCTCCATATACGTAAAACATGGCAATTCCCTCTTTCCGCGTGTAGAAATTCTGTGTAAAATGTATCCAACACTGTATCTGTATAAACAAAATCCTCANACTCTAATGACCGCTCNCCCACGGNCGTGTAGGGACAGGGAAAACGTATGGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS09LX2             [                                                                                                                                         ATG AAATTTCGTTTACGACCGCCGCGCACGTAGCTTTAGTGGAAGGAAGGAGTTTATTTCGTTTTATTATTTTCTTATTTGCCCCATTAACTTTATACTTACGCTAATAGTTGCTCTTTTATATTTTGTGCTGTTTTTTTTTTAATTATTTCCTTTTATTCCCAATTATGAACGTGCCGAGGTTTGAAAGGCTCTGGAAGAAGGGCGCTTGTCCTGTTCTCCATGTACGTAAAACATGGCAATTCCCTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CNS09LX3             [                                                                                                                                                                                                                                                                                                                                                                                               ggTCTTTCCGCGTGTAGAAATTCTGTGTAAAATGTATCCAA AATGTAACTGTATAAACAAAATCCTCAAACTCTAATGACCGTTCGCCAACGGGCGTGTAGGGACAGGGAAAACGTAGGGACAGAATAAAATAGAAGCAAACGAATTGTTAATAGTACGTGCACCACCACCACCACCACACACAAACATTATGGCTTAGTTGCGTAAAGCAAAACACTCAATGGCAAGTGTTGGCGGATTAAGAATGTAAGACAAAGCGTACTGTTTGAAATTGTCCTTCGTTAAACACAATTTGCTTTGTTTGTTTTTGGGTTAGGCTTAAACACATTTTGTATGATCATTACTTTTAATTTAAGCCGACCGGCGGCTGCCCCGTTGCGTCGGGCTGGCTTCGGGCAAACGATTGTGTGTGGGGGACCGTACACATACGACGGGGGGAGACACGGACACACGTGTGCCACACGCATGGCGCTGTGTACGACGCCCCTTTCGTAATGTAAACGCGCTTCCACACACTACACATTCTAGCAAGAAGTGCGCGCAACGAGAGACGAACAATAAGCGCGCGTAAGGTGGTTTTAGTGGCGTTGTAATCGAATGAAAATAATAA]


>consensus_5733#0 CCGCAAAAACAACGGAAGGGAACCCAAAATGCGATGACGACGGTGATGATGATGATGATG AGAGTAAGGGTGACGAAAGTGTGACTGAAAAGGGAGAACAGTTTATAAGGGCGATGAGTC CCTTTTCTAGCGATTATATGAAAATTTCGTTTACGACCGCCGCGCACGTAGCTTTAGTGG AAGGAAGGAGTTTATTTCGTTTTATTATTTTCTTATTTGCCCCATTAACTTTATACTTAC GCTAATAGTTGCTCTTTTATATTTTGTGCTGTTTTTTTTTTAATTATTTCCTTTTATTCC CAATTATGAACGTGCCGAGGTTTGAAAGGCTCTGGAAGAAGGGCGCTTGTCCTGTTCTCC ATGTACGTAAAACATGGCAATTCCCTCTTTCCGCGTGTAGAAATTCTGTGTAAAATGTAT CCAACACTGTATCTGTATAAACAAAATCCTCAAACTCTAATGACCGCTCGCCCACGGGCG TGTAGGGACAGGGAAAACGTAGGGACAGAAGAAAATAGAAGCAAATGAATTGTTAATAGT ACGCGCACCACCACCACCACCACACACAAACATTATGGCTTAGTTGCGTAAAGCAAAACA CTCAATGGCAAGTGTTGGCGGATTAAGAATGTAAGACAAAGCGTACTGTTTGAAATTGTC CTTCGTTTAACACAGGTTGCTTTGTTTCTTTTTGGGTTAGGCTTAAACACATTTTGTATG ATCATTACTTTTAATTTAAGCCGACCGGCGGCTGCCCCGTTGCGTCGGGCTGGCTTCGGG CAAACGATTGTGTGTGGGGGACCGTACACATACGACGGGGGGAGACACGGACACACGTGT GCCACACGCATGGCGCTGTGTACGACGCCCCTTTCGTAATGTAAACGCGCTTCCACACAC TACACATTCTAGCAAGAAGTGCGCGCAACGAGAGACGAACAATAAGCGCGCGTAAGGTGG TTTTAGTGGCGTTGTAATCGAATGAAAATAATAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)