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Anopheles gambiae
cluster # 5776 cluster # 5776       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5776#0 length = 1733 sequences # 4  

consensusID : consensus_5776#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1733
fasta sequence
                              [ATGCACCAGCGTGGTTGGCTGCTACGAGAAAAGCCGGTATAAAAACGTCTTCTAAATCTTTTCTACCGATACTCCGGGTTGGTTTTCCTCGGAATACACTTGGAAGAACATTGTGCGTGCATTTTGATGGTGTGAATATCATCCGGAACAGTGTCTACGGTGCAATATTGTCGTGGCAAGTGTCGCG-ACCAACAAGAAAGTGGTTTGAATCGAGAGAATCAAGTTTGCCGCCGCTCGAACCAAATACAATCACTGGCGAAACCACCGACCAGCCACCCTTTTTTGGCAATTAACGATTCGCTGGAATATGGCACTGAAACGGCCGCGAATTTCCGTGGGCGTGATGGCCGTGTGCTGCGGAGTGTTGTCCCTATCCGTCGTGGCGCGTGAATCTGCATCGCCCAATGAAGCCGAAACAGGCGGGCGAAAGTATGTCGCCGTGCATCATCAACCGGTGCATCCGGGGTCGTTCTCGTCGCCGGCCACGATGGAGTGGATGCCCGTCACCACGCCGCTCACGCCCGCCCCGAAACCGATCGATGAAGAACGGCACCGTAAGACGAGAGAAGCATTGCAGTTTTCTCGACCAGCTTTGCCGAGCGATGGATCCATCACTACCAGCCCCACGCCCAGCCAGATAAGACGCCGCCGAATGGAGCCTAAAATCCGGGGCCTTCCCTCTCCATTGGTGTTCATGCCGGCGCGTGGTCGCCGTTTTTGGCAGCTTCGAGATACCGGCAGAAAAGCGACAAATCACCATCGAGCAGATGCTGGAGAAGGGTGACTACTTCGTACCGAACCGGGGCAAAAAGGCACCCACTAACGGCGAGCTGATCAAGAAGGGCAAGTTTGATGTACTGCTGGGTGGCTCACCCGACGAGTACTTCTTTCCGAATCGGGGCAAAAAGCAGTACCTTCTGGCGTACGACGCCGGCAGCAACATAAAGACCGCTGGTGACCAACACCGCCAGTGGCGATACGGTTCCGCTTGAGGATAAAGTGAGCAGTTTCGCCGTGCCAAGTTACAGCACCTTCACCAGCCGTTTGTGAATCGATTGCGCCGAAATTTGCTCGAAAATTTGGCCAACGAGCACAAGGATACGTTCTTCTCGTCACGTGGCAAAAGGATTGTACCGATGGCGCAAGAGCTGATGTTTTTACCACCAAAGGCACTTTCGGACGATCAGCAGGACGATGCTGTACCGGAAGGTTTGACAGATGTCAGGGCACAAGACTTTACCGGCCAGGCAAATGATCTGGATGCGTTGTTCTGGAACGAGGATCTTCTCCTTCCTCTAGAGCAAGCAGGCAGTTAAGCAGAATCGGCAATGGAAATAGAAACATACCTAATTGCTTACTCCTGAGTACCACAGGACAACTGATCTGAACATGTTGGACATGCATTTATATATGTTTTTCCATGAATCTCTCAATACGATATTCAATGCAGCGAGTTTGTTTTGTACAATATAATTATGATCAGCAATTAATCAACATAAACAGAGAAACAAAAGCAAAGAAGAGATAAAAAACAAGGAAAAAAATAACTATATTACTATATTTTGTCCAAAAACAGAAGAGTATACATCAAACGAAAGACGCTTTGTAGACGAGCGAGTAAATTTATACAGTAAGACATCATAATTCACGGTGCGTTGGGCTAATATTAAGAAGACAAAAACAAAGGGAAAAAACAATGGTTGCTTTTCCAAAATAAATGCACATAACGTTAA]

[+] EMBL CNS09HWJ             [ATGCACCAGCGTGGTTGGCTGCTACGAGAAAAGCCGGTATAAAAACGTCTTCTAAATCTTTTCTACCGATACTCCGGGTTGGTTTTCCTCGGAATACACTTGGAAGAACATTGTGCGTGCATTTTGATGGTGTGAATATCATCCGGAACAGTGTCTACGGTGCAATATTGTCGTGGCAAGTGTCGCG ACCAACAAGAAAGTGGTTTGAATCGAGAGAATCAAGTTTGCCGCCGCTCGAACCAAATACAATCACTGGCGAAACCACCGACCAGCCACCCTTTTTTGGCAATTAACGATTCGCTGGAATATGGCACTGAAACGGCCGCGAATTTCCGTGGGCGTGATGGCCGTGTGCTGCGGAGTGTTGTCCCTATCCGTCGTGGCGCGTGAATCTGCATCGCCCAATGAAGCCGAAACAGGCGGGCGAAAGTATGTCGCCGTGCATCATCAACCGGTGCATCCGGGGTCGTTCTCGTCGCCGGCCACGATGGAGTGGATGCCCGTCACCACGCCGCTCACGCCCGCCCCGAAACCGATCGATGAAGAACGGCACCGTAAGACGAGAGAAGCATTGCAGTTTTCTCGACCAGCTTTGCCGAGCGATGGATCCATCACTACCAGCCCCACGCCCAGCCAGATAAGACGCCGCCGAATGGAGCCTAAAATCCGGGGCCTTCCCTCTCCATTGGTGTTCATGCCGGCGCGTGGTCGCCGTTTTTGGCAGCTTCGAGATACCGGCAGAAAAGCGACAAATCACCATCGAGCAGATGCTGGAGAAGGGTGACTACTTCGTACCGAACCGGGGCAAAAAGGCACCCACTAACGGCGAGCTGATCAAGAAGGGCAAGTTTGATGTACTGCTGGGTGGCTCACCCGACGAGTACTTCTTTCCGAATCGGGGCAAAAAGCAGTACCTTCTGGCGTACGACGCCGGCAGCAACATAAAGACCGCTGGTGACCAACACCGCCAGTGGCGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09J3M             [            GGTTGGCTGCTACGAGAAAAGCCGGTATAAAAACGTCTTCTAAATCTTTTCTACCGATACTCCGGGTTGGTTTTCCTCGGAATACACTTGGAAGAACATTGTGCGTGCATTTTGATGGTGTGAATATCATCCGGAACAGTGTCTACGGTGCAATATTGTCGTGGCAAGTGTCGCGAAGCAACAAGAAAGTGGTTTGAATCGAGAGAATCAAGTTTGCCGCCGCTCGAACCAAATACAATCACTGGCGAAACCACCGACCAGCCACCCTTTTTTGGCAATTAACGATTCGCTGGAATATGGCACTGAAACGGCCGCGAATTTCCGTGGGCGTGATGGCCGTGTGCTGCGGAGTGTTGTCCCTATCCGTCGTGGCGCGTGAATCTGCATCGCCCAATGAAGCCGAAACAGGCGGGCGAAATTATGTCGCCGTGCATCATCAACCGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09HWK             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aTTCGTACCGAACCGGGGCAAAAAGGCACCCACTAACGGCGAGCTGATCAAGAAGGGCAAGTTTGATGTACTGCTGGGTGGCTCACCCGACGAGTACTTCTTTCCGAATCGGGGCAAAAAGCAGTACCTTCTGGCGTACGACGCCGGCAGCAACAT AAGACCGCTGGTGACCAACACCGCCAGTGGCGATACGGTTCCGCTTGAGGATAAAGTGAGCAGTTTCGCCGTGCCAAGTTACAGCACCTTCACCAGCCGTTTGTGAATCGATTGCGCCGAAATTTGCTCGAAAATTTGGCCAACGAGCACAAGGATACGTTCTTCTCGTCACGTGGCAAAAGGATTGTACCGATGGCGCAAGAGCTGATGTTTTTACCACCAAAGGCACTTTCGGACGATCAGCAGGACGATGCTGTACCGGAAGGTTTGACAGATGTCAGGGCACAAGACTTTACCGGCCAGGCAAATGATCTGGATGCGTTGTTCTGGAACGAGGATCTTCTCCTTCCTCTAGAGCAAGCAGGCAGTTAAGCAGAATCGGCAATGGAAATAGAAACATACCTAATTGCTTACTCCTGAGTACCACAGGACAACTGATCTGAACATGTTGGACATGCATTTATATATGTTTTTCCATGAATCTCTCAATACGATATTCAATGCAGCGAGTTTGTTTTGTACAATATAATTATGATCAGCAATTAATCAACATAAACAGAGAAACAAAAGCAAAGAAGAGATAAAAAACAAGGAAAAAAATAACTATATTACTATATTTTGTCCAAAAACAGAAGAGTATACATCAAACGAAAGACGCTTTGTAGACGAGCGAGTAAATTTATACAGTAAGACATCATAATTCACGGTGCGTTGGGCTAATATTAAGAAGACAAAAACAAAGGGAAAAAACAATGGTTGCTTTTCCAAAATAAATGCACATAAC     ]
[-] EMBL CNS09J3N             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AACTGATCTGAACATGTTGGACATGCATTTATATATGTTTTTCCATGAATCTCTCAATACGATATTCAATGCAGCGAGTTTGTTTTGTACAATATAATTATGATCAGCAATTAATCAACATAAACAGAGAAACAAAAGCAAAGAAGAGATAAAAAACAAGGAAAAAAATAACTATATTACTATATTTTGTCCAAAAACAGAAGAGTATACATCAAACGAAAGACGCTTTGTAGACGAGCGAGTAAATTTATACAGTAAGACATCATAATTCACGGT CGTTGGGCTAATATTAAGAAGACAAAAACAAAGGGAAAAAACAATGGTTTCTTTTCCAAAATAAATGCACATAACGTTAA]


>consensus_5776#0 ATGCACCAGCGTGGTTGGCTGCTACGAGAAAAGCCGGTATAAAAACGTCTTCTAAATCTT TTCTACCGATACTCCGGGTTGGTTTTCCTCGGAATACACTTGGAAGAACATTGTGCGTGC ATTTTGATGGTGTGAATATCATCCGGAACAGTGTCTACGGTGCAATATTGTCGTGGCAAG TGTCGCGACCAACAAGAAAGTGGTTTGAATCGAGAGAATCAAGTTTGCCGCCGCTCGAAC CAAATACAATCACTGGCGAAACCACCGACCAGCCACCCTTTTTTGGCAATTAACGATTCG CTGGAATATGGCACTGAAACGGCCGCGAATTTCCGTGGGCGTGATGGCCGTGTGCTGCGG AGTGTTGTCCCTATCCGTCGTGGCGCGTGAATCTGCATCGCCCAATGAAGCCGAAACAGG CGGGCGAAAGTATGTCGCCGTGCATCATCAACCGGTGCATCCGGGGTCGTTCTCGTCGCC GGCCACGATGGAGTGGATGCCCGTCACCACGCCGCTCACGCCCGCCCCGAAACCGATCGA TGAAGAACGGCACCGTAAGACGAGAGAAGCATTGCAGTTTTCTCGACCAGCTTTGCCGAG CGATGGATCCATCACTACCAGCCCCACGCCCAGCCAGATAAGACGCCGCCGAATGGAGCC TAAAATCCGGGGCCTTCCCTCTCCATTGGTGTTCATGCCGGCGCGTGGTCGCCGTTTTTG GCAGCTTCGAGATACCGGCAGAAAAGCGACAAATCACCATCGAGCAGATGCTGGAGAAGG GTGACTACTTCGTACCGAACCGGGGCAAAAAGGCACCCACTAACGGCGAGCTGATCAAGA AGGGCAAGTTTGATGTACTGCTGGGTGGCTCACCCGACGAGTACTTCTTTCCGAATCGGG GCAAAAAGCAGTACCTTCTGGCGTACGACGCCGGCAGCAACATAAAGACCGCTGGTGACC AACACCGCCAGTGGCGATACGGTTCCGCTTGAGGATAAAGTGAGCAGTTTCGCCGTGCCA AGTTACAGCACCTTCACCAGCCGTTTGTGAATCGATTGCGCCGAAATTTGCTCGAAAATT TGGCCAACGAGCACAAGGATACGTTCTTCTCGTCACGTGGCAAAAGGATTGTACCGATGG CGCAAGAGCTGATGTTTTTACCACCAAAGGCACTTTCGGACGATCAGCAGGACGATGCTG TACCGGAAGGTTTGACAGATGTCAGGGCACAAGACTTTACCGGCCAGGCAAATGATCTGG ATGCGTTGTTCTGGAACGAGGATCTTCTCCTTCCTCTAGAGCAAGCAGGCAGTTAAGCAG AATCGGCAATGGAAATAGAAACATACCTAATTGCTTACTCCTGAGTACCACAGGACAACT GATCTGAACATGTTGGACATGCATTTATATATGTTTTTCCATGAATCTCTCAATACGATA TTCAATGCAGCGAGTTTGTTTTGTACAATATAATTATGATCAGCAATTAATCAACATAAA CAGAGAAACAAAAGCAAAGAAGAGATAAAAAACAAGGAAAAAAATAACTATATTACTATA TTTTGTCCAAAAACAGAAGAGTATACATCAAACGAAAGACGCTTTGTAGACGAGCGAGTA AATTTATACAGTAAGACATCATAATTCACGGTGCGTTGGGCTAATATTAAGAAGACAAAA ACAAAGGGAAAAAACAATGGTTGCTTTTCCAAAATAAATGCACATAACGTTAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)