Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5809 cluster # 5809       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5809#0 length = 1205 sequences # 4  
consensusID : consensus_5809#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1205
fasta sequence 
                              [CCGCGGACGCGTGGGTTTGTTTTGTTTGTTTGCTGGCTTTGCCAATAGAAAAGAAGCAGTCCGTGACGGAAGATATAGAGAGGGATGTAAACAAACAAAAAAACACACAGCAAGCCTGCAGGCAAGACCGATAGGGCCAAGCAATTGGGGGGAAAAGTGCAACAAAACTAAAACAAAAAAAAAACCGCAACACAATCCACAATCACTCAGCTGAGGTTACAGTCGAAAAATTGCATCCTAGGCAAAAAAAAAAAAAGAAAATTCGTCCATTTTTGTAGGATTTTGCGACGCGCGTTAATATAGGTGTTAGAGAAACAAACAAACAAACAAACAAAAAACAAATGCTAAAC--AAAAGGAAGCAAATCTTATCGCAAACAGATAGTGTATGTGTGTGTGTGTGAGTGAGTGTCATTAAGCTCCCTTTTTCCGCCCCTCCCCACACAGTCGCGCACCTGGACAGCAGCATCTGGTTTAGTATGCGGGCAGGGCGGAAATGAACTACTAATTATATAGAAAGGCCGAAGATGATGAGGATGATGATGATGATGATGATGATAGTAAATACATCAGTGTTACAGATAGCGCTTGGTGACAACACTCTCTGCACACTTGACAAACGTGCTGCTGATAGTGGTAGCCTGTGAGAGCCGCCTGGCCCAAACAAAGCTGTGCAGCGCTGAACAATCTTACACGTGAAACACGCTGCATTATGCACGCTCTCCTCCGAGGGGACTGTAGAAGGCTTTCATTACCATCATGCATAGAATGTTTTCTGTTACTTTAACGCTAACCATTTTTTTTACCGGTACGTTCCGGTCTGCGTGGGGTTGAACCCGAGCGACCCGAATGTACCGAATGCAATGTCGTATGCCTCGTATGCGATCACACACACTTTTGTTTGTGCAATGGTTTTGTACTAGCTTGTTTTTTTTTACCATTCAGGGGTTACCTTTTGCTGATGGGTAGCTGCTATTACCCAACTAGTGGGAGCCACCCAATCATAGCCAGGCTGAGACGGTCCGTGA-CCCGTACACATTGCCGTAACTAACCGCACTATCCATTAGTTATGCTCTACTTTAACGTGTCCGCTTGGTTTTGGCGGTATACAGGGGAGTTGGTTGTCATTCCTTCCCTTTCTACTGAGTCTACTACTACTATTGCGGTGGCTTGGTTCAATACACTGATTAAAATGAAATTTTGAAAAT]

[+] EMBL BM610549             [CCGCGGACGCGTGGGTTTGTTTTGTTTGTTTGCTGGCTTTGCCAATAGAAAAGAAGCAGTCCGTGACGGAAGATATAGAGAGGGATGTAAACAAACAAAAAAACACACAGCAAGCCTGCAGGCAAGACCGATAGGGCCAAGCAATTGGGGGGAAAAGTGCAACAAAACTAAAACAAAAAAAAAACCGCAACACAATCCACAATCACTCAGCTGAGGTTACAGTCGAAAAATTGCATCCTAGGCAAAAAAAAAAAAAGAAAATTCGTCCATTTTTGTAGGATTTTGCGACGCGCGTTAATATAGGTGTTAGAGAAACAAACAAACAAACAAACAAAAAACAAATGCTAAAC  AAAAGGAAGCAAATCTTATCGCAAACAGATAGTGTATGTGTGTGTGTGTGAGTGAGTGTCATTAAGCTCCCTTTTTCCGCCCCTCCCCACACAGTCGCGCACCTGGACAGCAGCATCTGGTTTAGTATGCGGGCAGGGCGGAAATGAACTACTAATTATATAGAAAGGCCGAAGATGATGAGGATGATGATGATGATGATGATGATAGTAAATACATCAGTGTTACAGATAGCGCTTGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX629086             [                                                                                                                                                                                                                                                                                                  CGCGTTAATATAGGTGTTAGAGAAACAAACAAACAAACAAACAAAAAACAAATGCTAAACAAAAAAGGAAGCAAATCTTATCGCAAACAGATAGTGTATGTGTGTGTGTGTGAGTGAGTGTCATTAAG TCCCCTTTTCCGCCCCTCCCCACACAGTCGCGCACCTGGACAGCAGCAACTGCTTTAGTATGCGGGCAGGGCGGAAATGAACTACTAATTATATAGAATGGCCGAAGATGACGAGGATGATGATGATGATGATGATGGTAGTAAATACATCAGTGTTACAGATAGCGCTTGTTGACAACACTCTCTGCACACTTGACAAACGTGCTGCTGATAGTGGTAGCCTGTGAGAGCCGCCTGGCCCAAACAAAGCTGTGCAGCGCTGAACAATCTTACACGTGAAACACGCTGCATTATGCACGCTCTCCTCCGAGGGGACTGTAGAAGGCTTTCATTACCATCATGCATAGAATGTTTTCTGTTACTTTAACGCTAACCATTTTTTTTACCGGTACGTTCCGGTCTGCGTGGGGTTGAACCCGAGCGACCCGAATGTACCGAATGCAATGTCGTATGCCTCGTATGCGATCACACACACTTTTGTTTGTGCAATGGTTTTGTACTAG                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM654053             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgGTGAAACACGCTGCATTATGCACGCTCTCCTCCGAGGGGACTGTAGAAGGCTTTCATTACCATCATGCATAGAATGTTTTCTGTTACTTTAACGCTAACCATTTTTTTTACCGGTACGTTCCGGTCTGCGTGGGGTTGAACCCGAGCGACCCGAATGTACCGAATGCAATGTCGTATGCCTCGTATGCGATCACACACACTTTTGTTTGTGCAATGGTTTTGTACTAGCTTGTTTTTTTTTACCATTCAGGGGTTACCTTTTGCTGATGGGTAGCTGCTATTACCCAACTAGTGGGAGCCACCCAATCATAGCCAGGCTGAGACGGTCCGTGA CCCGTACACATTGCCGTAACTAACCGCACTATCCATTAGTTATGCTCTACTTTAACGTGTCCGCTTGGTTTTGGCGGTATACAGGGGAGTTGGTTGTCATTCCTTCCCTTTCTACTGAGTCTACTACTACTATTGCGGTGGCTTGGTTCAATACACTGATTAAAATGAAATTTTGAAAAT]
[+] EMBL BX622125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCTTTCATTACCATCATGCATAGAATGTTTTCTGTTACTTTAACGCTAACCATTTTTTTTACCGGTACGTTCCGGTCTGCGTGGGGTTGAACCCGAGCGACCCGAATGTACCGAATGCAATGTCGTATGCCTCGTATGCGATCACACACACTTTTGTTTGTGCAATGGTTTTGTACTAGCTTGTTTTTTTTTACCATTCANGGGTTACCTTTTGCTGATGGGTAGCTGCTATTACCCAACTAGTGGGAGCCACCCAATCATAGCCAGGCTGAGACGGTCCGTGACCCCGTACACATTGCCGTAACTAACCGCACTATCCATTAGTTATGCTCT                                                                                                                                    ]




>consensus_5809#0
CCGCGGACGCGTGGGTTTGTTTTGTTTGTTTGCTGGCTTTGCCAATAGAAAAGAAGCAGT
CCGTGACGGAAGATATAGAGAGGGATGTAAACAAACAAAAAAACACACAGCAAGCCTGCA
GGCAAGACCGATAGGGCCAAGCAATTGGGGGGAAAAGTGCAACAAAACTAAAACAAAAAA
AAAACCGCAACACAATCCACAATCACTCAGCTGAGGTTACAGTCGAAAAATTGCATCCTA
GGCAAAAAAAAAAAAAGAAAATTCGTCCATTTTTGTAGGATTTTGCGACGCGCGTTAATA
TAGGTGTTAGAGAAACAAACAAACAAACAAACAAAAAACAAATGCTAAACAAAAGGAAGC
AAATCTTATCGCAAACAGATAGTGTATGTGTGTGTGTGTGAGTGAGTGTCATTAAGCTCC
CTTTTTCCGCCCCTCCCCACACAGTCGCGCACCTGGACAGCAGCATCTGGTTTAGTATGC
GGGCAGGGCGGAAATGAACTACTAATTATATAGAAAGGCCGAAGATGATGAGGATGATGA
TGATGATGATGATGATAGTAAATACATCAGTGTTACAGATAGCGCTTGGTGACAACACTC
TCTGCACACTTGACAAACGTGCTGCTGATAGTGGTAGCCTGTGAGAGCCGCCTGGCCCAA
ACAAAGCTGTGCAGCGCTGAACAATCTTACACGTGAAACACGCTGCATTATGCACGCTCT
CCTCCGAGGGGACTGTAGAAGGCTTTCATTACCATCATGCATAGAATGTTTTCTGTTACT
TTAACGCTAACCATTTTTTTTACCGGTACGTTCCGGTCTGCGTGGGGTTGAACCCGAGCG
ACCCGAATGTACCGAATGCAATGTCGTATGCCTCGTATGCGATCACACACACTTTTGTTT
GTGCAATGGTTTTGTACTAGCTTGTTTTTTTTTACCATTCAGGGGTTACCTTTTGCTGAT
GGGTAGCTGCTATTACCCAACTAGTGGGAGCCACCCAATCATAGCCAGGCTGAGACGGTC
CGTGACCCGTACACATTGCCGTAACTAACCGCACTATCCATTAGTTATGCTCTACTTTAA
CGTGTCCGCTTGGTTTTGGCGGTATACAGGGGAGTTGGTTGTCATTCCTTCCCTTTCTAC
TGAGTCTACTACTACTATTGCGGTGGCTTGGTTCAATACACTGATTAAAATGAAATTTTG
AAAAT

clustalw multiple alignements is not computed in this case
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)