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Anopheles gambiae
cluster # 5878 cluster # 5878       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5878#0 length = 1395 sequences # 4  

consensusID : consensus_5878#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1395
fasta sequence
                              [CTGCAAGCTATAAGAGAGAGAGAGTGAGAGATAGAGAGAGAGAATGAGAAAGAGAGAGAGAGGTACAGGGAAGGATAGTTATCAGGAGAAGACAATGCCAAAGGGCAACGCTAGTAAGTCAAAGTCATACCCATACAT--CCCCCCCCGCCTCCTTTTTTGTCTGACATCTCTCATTAAAAATCTATTCAGACATACACGAACGCGAGCCGTCACATCGCACTGTCACGATGGCGAACGATTGTCCGGTAACGTAGGCCACGTAGAGGGCGCAGCAGCAGCGGCAGATCGATAGTAGTGTGTAGTGTGCGTCTTAGTGTATTCCGCGCGTGT--GCGCGCGCGCGCTTGTTCGCGAACCAAAGCTGTGTTAGTAAGCTGATGCGTACTAGGTACTGTTATAGTGTTAGTTGCACGATGAGATAGAACAGGCCCGTCCCTCTTGTTCCAAATGTCTTCGTTATCAAGAGAAACCTTGTCCAAAGTCTTCAAACAGCTCTTTAAATAATACTC---CTACTACTACTACTACTACTACTACTACTACTAAAACTAAACATGAATCAAGCAGGAAAGGTAGTTCATACGACATATGACACAGACAGACACACTTTCTACACTAAGACAACAGGGGAGGCAATAAAAAAAACAAAGCAAGCGTCGATGCCGACGCAAACATTAGACGACGAACCCAGCACACGCTGGGCTCGTGCTCTCCCTCCCGAAATGTGTGTAGATATTCCTTTCGGTTTCTTTCTTCTGCCACATCTTACTACGAATTCTTATCTAATAAGCGTTACCGTCCCGCGCTGGGTCGGGCACCCTACGTACGAGCGGGAAATGGTGCAGTTGAGCGATCGAAATACACGCGTACTTAAGCTAAAGGCAAAACCCAAACTGAGGGACATTTTTTTTTTTGTTATGCTTGAGTAAGTCAAAGGAGACAAACAAAAAAAAAACAACTAAACTAAATATCTTACCTACGTTTTAGCCTTGCGGGCAAATTAGGCAGATAACTACACACCTACAGACACAGAGGACGGACAGTGGAATGGGACAGCGAAGCTTAGGGTGAAGGTGGTAGATACAGTATCGTAGACGATGCGTAACAAGGTATAAAAGAAACTAGAGAAAGTGATAGACGAAGAAAGAGAGTATGATAGAGATATGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAAAGGGGAAAGTGAGAGAGAGGAAGAGAAGTGGTGACTATAATCTCAGCTATTTCAACGAATGGTTGATGTATTTCAATTTCAATCTCTCTCCCTTTATCTCTCTCTCTCTCCCTCTTTCTTTCTCTCTCTCTCTCTCTGTCTATGTCTGTTTCAGTCTCGAAATGCTTCATTGTCCGTATCTAGCCAGAAACGAAACAAACTAAA]

[+] EMBL BX621660             [CTGCAAGCTATAAGAGAGAGAGAGTGAGAGATAGAGAGAGAGAATGAGAAAGAGAGAGAGAGGTACAGGGAAGGATAGTTATCAGGAGAAGACAATGCCAAAGGGCAACGCTAGTAAGTCAAAGTCATACCCATACATCCCCCCCCCCGCCTCCTTTTTTGTCTGACATCTCTCATTAAAAATCTATTCAGACATACACGAACGCGAGCCGTCACATCGCACTGTCACGATGGCGAACGATTGTCCGGTAACGTAGGCCACGTAGAGGGCGCAGCAGCAGCGGCAGATCGATAGTAGTGTGTAGTGTGCGTCTTAGTGTATTCCGCGCGTGT  GCGCGCGCGCGCTTGTTCGCGAACCAAAGCTGTGTTAGTAAGCTGATGCGTACTAGGTACTGTTATAGTGTTAGTTGCACGATGAGATAGAACAGGCCCGTCCCTCTTGTTCCAAATGTCTTCGTTATCAAGAGAAACCTTGTCCAAAGTCTTCAAACAGCTCTTTAAATAATACTCCTACTACTACTACTACTACTACTACTACTACTACTAAAACTAAACATGAATCAAGCAGGAAAGGTAGTTCATACGACATATGACACAGACAGACACACTTTCTACACTAAGACAACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX615081             [                                                 AAGAGAGAGAGAGCTACAGGGAAAGATAGTTATCAGGAGAAGACAATGCCAAAGGGCAACGCTAGTAAGTCAAAGTCATACCCATACAT  CCCCCCCCGCCTCCTTTTTTGTCTGACATCTCTCATTAAAAATCTATTCAGACATACACAAACGCGAGCCTTCAGATCGCACTGTCACGATGGCGAACGATTGTCCGGTAACGTAGGCCACGTAGAGGGCGCAGCAGCAGCGGCAGATCGATAGTAGTGTGTAGTGTGCGTCTTAGTGTATTCCGCGCGTGT  GCGCGCGCGCGCTTGTTCGCGAACCAAAGCTGTGTTAGTAAGCTGATGCGTACTAGGTACTGTTATAGTGTTAGTTGCACGATGAGATAGAACAGGCCCGTCCCTCTTGTTCCAAATGTCTTCGTTATCAAGAGAAACCTTGTCCAAAGTCTTCAAACAGCTCTTTAAATAATACTC   CTACTACTACTACTACTACTACTACTAaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM624042             [                                                                                                                                                                                                                      ccgCGCACTGTCACGATGGCGAACGATTGTCCGGTAACGTAGGCCACGTAGAGGGCGCAGCAGCAGCGGCAGATCGATAGTAGTGTGTAGTGTGCGTCTTAGTGTATTCCGTGCGTGTGCGCGCGCGCGCGCTTGTTCGCGAACCAAAGCTGTGTTAGTAAGCTGATGCGTACTAGGTACTGTTATAGTGTTAGTTGCACGATGAGATAGAACAGGCCCGTCCCTCTTGTTCCAAATGTCTTCGTTATCAAGAGAAACCTTGTCCAAAGTCTTCAAACAGCTCTTTAAATAATACTC   CTACTACTACTACTACTACTACTACTACTACTAAAACTAAACATGAATCAAGCAGAAAAGGTAGTTCATACGACATATGACACAGACAGACACACTTTCTACACTAAGACAACAGGGGAGGCAATAAAAAAAACAAAGCAAGCGTCGATGCCGACGCAAACATTAGACGACGAACCCAGCACACGCTGGGCTCGTGCTCTCCCTCCCGAAATGTGTGTAGATATTCCTTTCGGTTTCTTTCTTCTGCCACATCTTACTACGAATTCTTATCTAATAAGCGTTACCGTCCCGCGCTGGGTCGGGCACCCTACGTACGAGCGGGAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX613477             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATATTCCTTTCGGTTTCTTTCTTCTGCCACATCTTACTACGAATTCTTATCTAATAAGCGTTACCGTCCCGCGCTGGGTCGGGCACCCTACGTACGAGCGGGAAATGGTGCAGTTGAGCGATCGAAATACACGCGTACTTAAGCTAAAGGCAAAACCCAAACTGAGGGACATTTTTTTTTTTGTTATGCTTGAGTAAGTCAAAGGAGACAAACAAAAAAAAAACAACTAAACTAAATATCTTACCTACGTTTTAGCCTTGCGGGCAAATTAGGCAGATAACTACACACCTACAGACACAGAGGACGGACAGTGGAATGGGACAGCGAAGCTTAGGGTGAAGGTGGTAGATACAGTATCGTAGACGATGCGTAACAAGGTATAAAAGAAACTAGAGAAAGTGATAGACGAAGAAAGAGAGTATGATAGAGATATGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAAAGGGGAAAGTGAGAGAGAGGAAGAGAAGTGGTGACTATAATCTCAGCTATTTCAACGAATGGTTGATGTATTTCAATTTCAATCTCTCTCCCTTTATCTCTCTCTCTCTCCCTCTTTCTTTCTCTCTCTCTCTCTCTGTCTATGTCTGTTTCAGTCTCGAAATGCTTCATTGTCCGTATCTAGCCAGAAACGAAACAAACTAAA]


>consensus_5878#0 CTGCAAGCTATAAGAGAGAGAGAGTGAGAGATAGAGAGAGAGAATGAGAAAGAGAGAGAG AGGTACAGGGAAGGATAGTTATCAGGAGAAGACAATGCCAAAGGGCAACGCTAGTAAGTC AAAGTCATACCCATACATCCCCCCCCGCCTCCTTTTTTGTCTGACATCTCTCATTAAAAA TCTATTCAGACATACACGAACGCGAGCCGTCACATCGCACTGTCACGATGGCGAACGATT GTCCGGTAACGTAGGCCACGTAGAGGGCGCAGCAGCAGCGGCAGATCGATAGTAGTGTGT AGTGTGCGTCTTAGTGTATTCCGCGCGTGTGCGCGCGCGCGCTTGTTCGCGAACCAAAGC TGTGTTAGTAAGCTGATGCGTACTAGGTACTGTTATAGTGTTAGTTGCACGATGAGATAG AACAGGCCCGTCCCTCTTGTTCCAAATGTCTTCGTTATCAAGAGAAACCTTGTCCAAAGT CTTCAAACAGCTCTTTAAATAATACTCCTACTACTACTACTACTACTACTACTACTACTA AAACTAAACATGAATCAAGCAGGAAAGGTAGTTCATACGACATATGACACAGACAGACAC ACTTTCTACACTAAGACAACAGGGGAGGCAATAAAAAAAACAAAGCAAGCGTCGATGCCG ACGCAAACATTAGACGACGAACCCAGCACACGCTGGGCTCGTGCTCTCCCTCCCGAAATG TGTGTAGATATTCCTTTCGGTTTCTTTCTTCTGCCACATCTTACTACGAATTCTTATCTA ATAAGCGTTACCGTCCCGCGCTGGGTCGGGCACCCTACGTACGAGCGGGAAATGGTGCAG TTGAGCGATCGAAATACACGCGTACTTAAGCTAAAGGCAAAACCCAAACTGAGGGACATT TTTTTTTTTGTTATGCTTGAGTAAGTCAAAGGAGACAAACAAAAAAAAAACAACTAAACT AAATATCTTACCTACGTTTTAGCCTTGCGGGCAAATTAGGCAGATAACTACACACCTACA GACACAGAGGACGGACAGTGGAATGGGACAGCGAAGCTTAGGGTGAAGGTGGTAGATACA GTATCGTAGACGATGCGTAACAAGGTATAAAAGAAACTAGAGAAAGTGATAGACGAAGAA AGAGAGTATGATAGAGATATGAGAGAGAGAGAGAGAGAGAGAGCGAGAGAAAGGGGAAAG TGAGAGAGAGGAAGAGAAGTGGTGACTATAATCTCAGCTATTTCAACGAATGGTTGATGT ATTTCAATTTCAATCTCTCTCCCTTTATCTCTCTCTCTCTCCCTCTTTCTTTCTCTCTCT CTCTCTCTGTCTATGTCTGTTTCAGTCTCGAAATGCTTCATTGTCCGTATCTAGCCAGAA ACGAAACAAACTAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)