These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5936#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1216 fasta sequence [TTTTGTGTGAAGGTTTTGCGTTGCTTTTATTCAGTTTTTACATTTACAATCATACTGCCCGCCTCTTCATTAGTTGTTAAACAAAAGCGTTATTTTCGCGCA-A-CTCACTCATCATCGAATGAAGCCCGAATATCCATGTCACCGATGGCGGTTAGCTTGTCGTAGTCCAGGATGTCGTTCTCTTGCCGGGCAAGCTCCAAAATTTTCAGCTTATCAATAATGTTAGCCACCCGGAACACGATACCGTCCGAGCCGTCCTCCGCGGACAGGATCGACCCTGCCAGCGGCTTTAGTGCGTCCCTCTGTTGGAAGTAATTCAGCACGATCTTTTTCAAATCGTCCGCCGGACCATCGACGCGATCCGTCTGCAGGAACAAATAGTTGGACATCGTGCCTTCGGC-CACTTTTTCGACACTCGCTCGAGAATGCGCTCCAGCAGAGCAATTTCGG-CCGTCGGATCTTCGTACACCTGCTGGGCGGTTTGGGTCGGCGTCGCAGGCGTTACCGTACCGGGCGGACAGGCACATCTTCCTTTCGGTTTAATGAGGAAATCGTCCACAATCAATTTCCGGGGCTTGTGGCGCTGCACCGTTTTGCCATTGTCGGTAATGATCACGTACTCCAGTATGTCCCCGCTCTTGACGATCACGCTTTCATCCTGCAGAAAGAACTTGCCGTGCGTGATTTCCGTCGTATTGCGGCACACGTTGCACGGCTGCTGCTTTCGGCCGTGCACCGGATTGATGAACAGCTCCACGCCGAACCCCTTCATCTGTGGCTTTTGTGTCGTCCACAGGCGCAAACCTTGCGGGTCGAGCACCTCGAACTCCACGCGGCACACATCGTGGCCCTTGTTTTTGTTGCTGCGGAACCAGTCCAAGAAGCCACCCTCGGCGACACCGATCACCGCCAGACAAAGCAGCACCGTACACACACGAGAAGTTACACTACACTGTCTCATCATTGGGGACGACCGTTTGCCACGATGGTTAAACAGGAACTAACCACCAACCAACTATGGAGCAACTATGAATTTTTCGCTTCGTTTATGCTTCTTCGCCGAACGCGGCTAAGCTGCACTCCTTCTTATCGCTCCAGCTCCTTCAGTTTAGTTCAGGTTGCGTGATGTACCGATCACGGAAGGTTATCGGTAAAACCAACAGCAAGTCGAACGGACGCACGGTCCAGGCAATAGCGCTTGAACCGTTCGGCCCGG] [+] EMBL CNS096AK [TTTTGTGTGAAGGTTTTGCGTTGCTTTTATTCAGTTTTTACATTTACAATCATACTGCCCGCCTCTTCATTAGTTGTTAAACAAAAGCGTTATTTTTGCGCACA CTCACTCATCATCGAATGAAGCCCGAATATCCATGTCACCGATGGCGGTTAGCTTGTCGTAGTCCAGGATGTCGTTCTCTTGCCGGGCAAGCTCCAAAATTTTCAGCTTATCAATAATGTTAGCCACCCGGAACACGATACCGTCCGAGCCGTCCTCCGCGGACAGGATCGACCCTGCCAGCGGCTTTAGTGCGTCCCTCTGTTGGAAGTAATTCAGCACGATCTTTTTCAAATCGTCCGCCGGACCATCGACGCGATCCGTCTGCAGGAACAAATAGTTGGACATCGTGCCTTCGGC AACTTTTTCGACACTCGCTCGAGAATGCGCTCCAGCAGAGCAATTTCGGCCCGTCGGATCTTCGTACACCTGCTGGGCGGTTTGGGTCGGCGTCGCAGGCGTTACCGTACCGGGCGGACAGGCACATCTTCCTTTCGGT ] [+] EMBL CNS09OQT [ CGTTGCTTTTATTCAGTTTTTACATTTACAATCATACTGCCCGCCTCTTCATTAGTTGTTAAACAAAAGCGTTATTTTCGCGCA A CTCACTCATCATCGAATGAAGCCCGAATATCCATGTCACCGATGGCGGTTAGCTTGTCGTAGTCCAGGATGTCGTTCTCTTGCCGGGCAAGCTCCAAAATTTTCAGCTTATCAATAATGTTAGCCACCCGGAACACGATACCGTCCGAGCCGTCCTCCGCGGACAGGATCGACCCTGCCAGCGGCTTTAGTGCGTCCCTCTGTTGGAAGTAATTCAGCACGATCTTTTTCAAATCGTCCGCCGGACCATCGACGCGATCCGTCTGCAGGAACAAATAGTTGGACATCGTGCCTCCGGC CACTTTTTCGACACTCGCTCGAGAATGCGCTCCAGCAGAGCAATTTCGG CCGTCGGATCTTCGTACACCTGCTGGGCGGTTTGGGTCGGCGTCGCAGGCGTTACCGTACCGGGCGGACAGGCACATCTTCCTTTCGGTTTAATGAGGAAATCGTCCACAATCAATTTCCGGGGCTTGTGGCGCTGCACCGTTTTGCCATTGTCGGTAATGATCACGTACTCCAGTATGTCCCCGCTCTTGACGATCACGCTTTCATCCTGCAGAAAGAACTTGCCGTGCGTTATTTCCGTCGTATTGCGGCACACGTTGCACGGCTGCTGCTTTCGGCCGTTCACCGGATTGATGAACAGCTCCACGCCGAACCCCTTCATCTGTGGCTTTTGTGTTGTCCACAGGCGCAAACCTTGCGGGTCGAGCACCTCGAACTCCACGCGGCACAAATCGTGGCCCTTGTTTTTGTTGCTGCGGAACCAGTTCAAGAAGCCACCCTCGGCGACACCGATCACCGCCAGAAAAAGCAGCACCGTACACACACGAGAAGTTACACTACACTGTCTCATCATTGGGGACGACCGTTTGCCACGA ] [-] EMBL CNS09OQS [ TTACATTTACAATCATACTGCCCGCCTCTTCATTAGTTGTTAAACAAAAGCGTTATTTTCGCGCA AGCTCACTCATCATCGAATGAAGCCCGAATATCCATGTCACCGATGGCGGTTAGCTTGTCGTAGTCCAGGATGTCGTTCTCTTGCCGGGCAAGCTCCAAAATTTTCAGCTTATCAATAATGTTAGCCACCCGGAACACGATACCGTCCGAGCCGTCCTCCGCGGACAGGATCGACCCTGCCAGCGGCTTTAGTGCGTCCCTCTGTTGGAAGTAATTCAGCACGATCTTTTTCAAATCGTCCGCCGGACCATCGACGCGATCCGTCTGCAGGAACAAATAGTTGGACA ATTCCTTCGGCACACTTTTTCGATACTCGCTCGAGAATGCGCTCCAGCAGAGCAATTTCGG CCGTCGGATCTTCGTACACCTGCTGGGCGGTTTGGGTCGGCGTCGCAGGCGTTA CGTACCGGGCGGACAGGCACATCTTCCTTTCGGTTTAATGAGGAAATCGTCCACAATCAATTTCCGGGGCTTGTGGCGCTGCACCGTTTTGCCATTGTCGGTAATGATCACGTACTCCAGTATGTCCCCGCTCTTGACGATCACGCTTTCATCCTGCAGAAAGAACTTGCCGTGCGTGATTTCCGTCGTATTGCGGCACACGTTGCACGGCTGCTGCTTTCGGCCGTGCACCGGATTGATGAACAGCTCCACGCCGAACCCCTTCATCTGTGGCTTTTGTGTCGTCCACAGGCGCAAACCTTGCGGGTCGAGCACCTCGAACTCCACGCGGCACACATCGTGGCCCTTGTTTTTGTTGCTGCGGAACCAGTCCAAGAAGCCACCCTCGGCGACACCGATCACCGCCAGACAAAGCAGCACCGTACACACACGAG ACTTACACTACACTGTCTCATCATTGGGGACGACCGTTTGCCACGATGGTTAAAC ] [-] EMBL CNS096AJ [ CCATGTCACCGATGGCGGTTAGCTTGTCGTAGTCCAGGATGTCGTTCTCTTGCCGGGCAAGCTCCAAAATTTTCAGCTTATCAATAATGTTAGCCACCCGGAACACGATACCGTCCGAGCCGTCCTCCGCGGACAGGATCGACCCTGCCAGCGGCTTTAGTGCGTCCCTCTGTTGGAAGTAATTCAGCACGATCTTTTTCAAATCGTCCGCCGGACCATCGACGCGATCCGTCTGCAGGAACAAATAGTTGGAC CAATTCCTTCGGCACACTTTTTCGACACTCGCTCGAGAATGCGCTCCAGCAGAGCAATTTCGG CCGTCGGATCTTCGTACACCTGCTGGGCGGTTTGGGTCGGCGTCGCAGGCGTTA CGTACCGGGCGGACAGGCACATCTTCCTTTCGGTTTAATGAGGAAATCGTCCACAATCAATTTCCGGGGCTTGTGGCGCTGCACCGTTTTGCCATTGTCGGTAATGATCACGTACTCCAGTATGTCCCCGCTCTTGACGATCACGCTTTCATCCTGCAGAAAGAACTTGCCGTGCGTGATTTCCGTCGTATTGCGGCACACGTTGCACGGCTGCTGCTTTCGGCCGTGCACCGGATTGATGAACAGCTCCACGCCGAACCCTTTCATCTGTGGCTTTTGTGTCGTCCACAGGCGCAAACCTTGCGGGTCGAGCACCTCGAACTCCACGCGGCACACATCGTGGCCCTTGTTTTTGTTGCTGCGGAACCAGTCCAAGAAGCCACCCTCGGCGACACCGATCACCGCCAGACAAAGCAGCACCGTACACACACGAG TCTTACACTACACTGTCTCATCATT GGGAAAACCG TTGCCACGATGGgcaacaag ] [-] EMBL BM588653 [ GTTTAATGAGGAAATCGTCCACAATCAGTTTCCGGGGCTTGTGGCGCTGCACCGTTTTGCCATTGTCGGTAATGATCACGTACTCCAGTATGTCCCCGCTCTTGACGATCACGCTTTCATCCTGCAGAAAGAACTTGCCGTGCGTGATTTCCGTCGTATTGCGGCACACGTTGCACGGTTGCTGCTTACGGCCGTGCACCGGATTGATGAACAGCTCCACGCCGAACCCTTTCATCTGTGGCTTTTGTGCCGTCCACAGGCGCAAACCTTGTGGGTCGAGCACCTCGAACTCCACGCGGCACACATCGTGGCCCTTGTTTTTGTTGCTGCGGAACCAGTCCAAGAAGCCACCCTCGGCGACACCGATCACCGCCAGGCAAAGCAGCACCGTACACACACGAGACGTTACACTACACTGTCTCATCATTTGGGACAACCGTTTATCACGATGGTTAAACAAGAACTAACCACCAACCAACTATGGAGCAACTATGAATTTTTCGCTTCGTTTATGCTTCTTCGCCGAACGCGGCTAAGCTGCACTCCTTCTTATCGCTCCAGCTCCTTCAGTTTAGTTCAGGTTGCGTGATGTACCGATCACGGAAGGTTATCGGTAAAACCAACAGCAAGTCGAACGGACGCACGGTCCAGGCAATAGCGCTTGAACCGTTCGGCCCGG] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||