cluster # 5939

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 5939 cluster # 5939 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5939#0 length = 1504 sequences # 5
consensusID : consensus_5939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1504
fasta sequence
                              [GGTTCGCAACGAG-AATTATCCCACGTTGTGCAAAGTTAGCACGGAAAAGACTAATTTATACAGTATTGTTTCTCGGTTTTAGACGCTTTCCGGCCATCATGTGCAGTATCGTGGAGGACGACTTTGGTGACGAGGGCGGTGCACACGCCATGAAGGAGGACACACCGCAGCCGGAGCTGGGCGGTAATGAGCTGTGCCGCAAGTGCAACACCGAGCAGGCCGTTTTGAAGCTCAACCAGAAGGAACCGCAGTGTCGGGTTTGCTTTCTCAACTACGTGCGGCACAAGTTTCGGGCTTCGCTGGGTTCCACAAAAATCGTGCGCCGAGGATCGCGCGTGCTCATCATCCTTACCGGAGAGCCGGCGAACGTGACCCTGCTCGATATGGTACGGTTCGGGCTGGAGCAGGATGCGTTCAAGCAGCTACGGATAGTACCGGTCCTGTTGTACGTCGATGACGATTTCGTTGGAAACACATCGGAGGCAAGATTACAACAGCTGGCGGAGCGATTACAGGTGTTCAAGCAGTTCGAGAGCTTCCCGGCGTACTATACCGTGTGTGGTTCTTCGCGGCACGTTG-CCCTTACGTTTGACGGCGCCTTTTCACCGGCCGGTTTTGAGCAAGATGAAGCACGACTGCTGCAGGTGTTGGATGCGGTCCGATCGGTTTCGTCCAAGCAGGATCTACTGGAGCAGGTGCGCAAACAAACGTATCGGCAAATCGGTCATGCCCTCCAGTGTGCCTACGTCTTCCTGTCCGACATTGGGGTCGATCTGGCCAAAACGCTACTCTCGAATGTGGCTCTTGGTCGTGGATGTTCCCTTGCGCAGGATGTAGCCTTCTGTGATGATCGCTATAATACGGTGAAGCTGGTACGACCAATACGCGATCTCAATCCGGACGAGGTTAGCAATTATTTACAGTACAGCGAGCAACCATTGCTGTCCTACTCGCCCGCCAAACACTTCGAGGATAAGCCAAGCTTGCAGAATTTGACCGCCAAGTTTATCGACAATCTGATGCAAAGCTTCCCGTCGACGGTATCGACCGTGTACCGAACCGGTGATAAATTGGACGCACCGAAAGCAGCACGAAACGGTCCCACCGTCGGCGATGGGTTATCGGAAAGGCAAGACGAAAGCGAGGATTTTCTTGCCCTGTTTGACAGAACGCTCACATTGGACGATCGGCCGTCGGGAGAGTGTTGCCGTTTCTGCGGTGTTGCCTTAGACTATCGAGGATCGAAAACGCTGTTTGCTACCGAATATTCGCGCCTCGTTTCGTCCCGGATTAATGCCGCCTGCAGCCATGAGGATATTTTGCTAAAGTCCAAGCAAATGGAATTGGATGCGGAACGTGCGGTAAACGGTGAAGATGACCAGGGTGAAGAGCGCGTGCTCATGAAACAGCTTTGCCATGGGTGTAGGAATATTTTTGAAGATTTAAATAAATAAATATGAGATGATCATATAATAAACGCACTATGTTGTGGAAAAGAGAGAAA]

[+] EMBL CNS09HWA             [GGTTCGCAACGAG AATTATCCCACGTTGTGCAAAGTTAGCACGGAAAAGACTAATTTATACAGTATTGTTTCTCGGTTTTAGACGCTTTCCGGCCATCATGTGCAGTATCGTGGAGGACGACTTTGGTGACGAGGGCGGTGCACACGCCATGAAGGAGGACACACCGCAGCCGGAGCTGGGCGGTAATGAGCTGTGCCGCAAGTGCAACACCGAGCAGGCCGTTTTGAAGCTCAACCAGAAGGAACCGCAGTGTCGGGTTTGCTTTCTCAACTACGTGCGGCACAAGTTTCGGGCTTCGCTGGGTTCCACAAAAATCGTGCGCCGAGGATCGCGCGTGCTCATCATCCTTACCGGAGAGCCGGCGAACGTGATCCTGCTCGATATGGTACGGTTCGGGCTGGAGCAGGATGCGTTCAAGCAGCTACGGATAGTACCGGTCCTGTTGTACGTCGATGACGATTTCGTTGGAAACACATCGGAGGCAAGATTACAACAGCTGGCGGA CGATTACAGGTGTTCAAGCAGTTCGAGAGCTTCCCGGCGTACTATACCGTGTGTGGTTCTTCGCGGCACGTTG CCCTTACGTTTGACGGCGCCTTTTCACCGGCCGGTTTTGAGCAAGATGAAGCACGACTGCTGCAGGTGTTGGATGCGGTCCGATCGGTTTCGTCCAAGCAGGATCTACTGGAGCAGGTGCGCAAACAAACGTATCGGCAAATCGGTCATGCCCTCCAGTGTGCCTACGTCTTCCTGTCCGACATTGGGGTCGATCTGGCCAAAACGCTACTCTCGAATGTGGCTCTTGGTCGTGGATGTTCCCTTGCGCAGGATGTAGCCTTCTGTGATGATCGCTATAATACGGTGAAGCTGGTACGACCAATACGCGATCTCAATCCGGACGAGGTTAGCAATTATTTACAGTACAGCGAGCAACCATTGCTGTCCTACTCGCCCGCCAAACACTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM588741             [       ccgGAGAAATTATCCCACGTTGTGCAAAGTTAGCACGGAAAAGACGAATTTATACAGCATTGTTTCTCGGTTTTAGACGCTTGCTGGCCAGCATGTGCAGTATCGTAGAGGACGACTTTGGTGACGAGGGCGGTGCACACGCCATGAAGGAGGACACACCGCAGCCGGAGCTGGGCGGTAATGAGCTGTGCCGCAAATGCAACACCGAGCAGGCCGTTTTGAAGCTCAACCAGAAGGAACCGCAGTGTCGGGTTTGCTTTCTCAACTACGTGCGGCACAAGTTTCGGGCTTCGCTGGGTTCCACAAAAATCGTGCGCCGTGGATCGCGCGTACTCATCATCCTTACCGGAGAGCCGGCGAACGTGACCCTGCTCGATATGGTACGGTTCGGGCTGGAGCAGGATGCGTTCAAGCAGCTACGGATAGTACCGGTCCTGCTGTACGTCGATGACGATTTCATTGGAAACACACCGGAGGCAAGATTACGACAGCTGGCGGAGCGATTACAGGTGTTCAAGCAGTTCGAGAGCTTCCCGGCGTACTATACCGTGTGTGGTTCTTCGCGGCACGTTGCCCCTTACGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM638501             [                  ccgCCACGTTGTGCAAAGTTAGCACGGAAAAGACTAATTTATACAGTATTGTTTCTCGGTTTTAGACGCTTTCCGGCCATCATGGGGGGGGTCGTGGAGGACTACTTTGGTGACGAGGGCGGTGCACACGCCATGAAGGAGGACACACCGCAGCCGGAGCTGGGCGGTAATGAGCTGTGCCGCAAGTGCAACACCGAGCAGGCCGTTTTGAAGCTCAACCAGAAGGAACCGCAGTGTCGGGTTTGCTTTCTCAACTACGTGCGGCACAAGTTTCGGGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX620509             [                                     TAGCACGGAAAAGACTAATTTATACAGTATTGTTTCTCGGTTTTAGACGCTTTCCGGCCATCATGTGCAGTATCGTGGAGGACGACTTTGGTGACGAGGGCGGTGCACACGCCATGAAGGAGGACACACCGCAGCCGGAGCTGGGCGGTAATGAGCTGTGCCGCAAGTGCAACACCGAGCAGGCCGTTTTGAAGCTCAACCAGAAGGAACCGCAGTGTCGGGTTTGCTTTCTCAACTACGTGCGGCACAAGTTTCGGGCTTCGCTGGGTTCCACAAAAATCGTGCGCCGAGGATCGCGCGTGCTCATCATCCTTACCGGAGAGCCGGCGAACGTGACCCTGCTCGATATGGTACGGTTCGGGCTGGAGCAGGATGCGTTCAAGCAGCTACGGATAGTACCGGTCCTGTTGTACGTCGATGACGATTTCGTTGGAAACACATCGGAGGCAAGATTACAACAGCTGGCGGAGCGATTACAGGTGTTCAAGCAGTTCGAGAGCTTCCCGGCGTACTATACCGTGTGTGGTTCTTCGCGGCACGTTG CCCTTACGTTTGACGGCGCCTTTTCACCGGCCGGTTTTGAGCAAGATGAAGCACGACTGCTGCAGGTGTTGGATGCGGTCCGATCGGTTTCGTCCAAGCAGGATCTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09HWB             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCCCGGCGTACTATACCGTGTGTGGTTCTTCGCGGCACGTTG CCCTTACGTTTGACGGCGCCTTTTCACCGGCCGGTTTTGAGCAAGATGAAGCACAACTGCTGCAGGTGTTGGATGCGGTCCGATCGGTTTCGTCCAAGCAGGATCTACTGGAGCAGGTGCGCAAACAAACGTATCGGCAAATCGGTCATGCCCTCCAGTGTGCCTACGTCTTCCTGTCCGACATTGGGGTCGATCTGGCCAAAACGCTACTCTCGAATGTGGCTCTTGGTCGTGGATGTTCCCTTGCGCAGGATGTAGCCTTCTGTGATGATCGCTATAATACGGTGAAGCTGGTACGACCAATACGCGATCTCAATCCGGACGAGGTTAGCAATTATTTACAGTACAGCGAGCAACCATTGCTGTCCTACTCGCCCGCCAAACACTTCGAGGATAAGCCAAGCTTGCAGAATTTGACCGCCAAGTTTATCGACAATCTGATGCAAAGCTTCCCGTCGACGGTATCGACCGTGTACCGAACCGGTGATAAATTGGACGCACCGAAAGCAGCACGAAACGGTCCCACCGTCGGCGATGGGTTATCGGAAAGGCAAGACGAAAGCGAGGATTTTCTTGCCCTGTTTGACAGAACGCTCACATTGGACGATCGGCCGTCGGGAGAGTGTTGCCGTTTCTGCGGTGTTGCCTTAGACTATCGAGGATCGAAAACGCTGTTTGCTACCGAATATTCGCGCCTCGTTTCGTCCCGGATTAATGCCGCCTGCAGCCATGAGGATATTTTGCTAAAGTCCAAGCAAATGGAATTGGATGCGGAACGTGCGGTAAACGGTGAAGATGACCAGGGTGAAGAGCGCGTGCTCATGAAACAGCTTTGCCATGGGTGTAGGAATATTTTTGAAGATTTAAATAAATAAATATGAGATGATCATATAATAAACGCACTATGTTGTGGAAAAGAGAGAAA]




>consensus_5939#0
GGTTCGCAACGAGAATTATCCCACGTTGTGCAAAGTTAGCACGGAAAAGACTAATTTATA
CAGTATTGTTTCTCGGTTTTAGACGCTTTCCGGCCATCATGTGCAGTATCGTGGAGGACG
ACTTTGGTGACGAGGGCGGTGCACACGCCATGAAGGAGGACACACCGCAGCCGGAGCTGG
GCGGTAATGAGCTGTGCCGCAAGTGCAACACCGAGCAGGCCGTTTTGAAGCTCAACCAGA
AGGAACCGCAGTGTCGGGTTTGCTTTCTCAACTACGTGCGGCACAAGTTTCGGGCTTCGC
TGGGTTCCACAAAAATCGTGCGCCGAGGATCGCGCGTGCTCATCATCCTTACCGGAGAGC
CGGCGAACGTGACCCTGCTCGATATGGTACGGTTCGGGCTGGAGCAGGATGCGTTCAAGC
AGCTACGGATAGTACCGGTCCTGTTGTACGTCGATGACGATTTCGTTGGAAACACATCGG
AGGCAAGATTACAACAGCTGGCGGAGCGATTACAGGTGTTCAAGCAGTTCGAGAGCTTCC
CGGCGTACTATACCGTGTGTGGTTCTTCGCGGCACGTTGCCCTTACGTTTGACGGCGCCT
TTTCACCGGCCGGTTTTGAGCAAGATGAAGCACGACTGCTGCAGGTGTTGGATGCGGTCC
GATCGGTTTCGTCCAAGCAGGATCTACTGGAGCAGGTGCGCAAACAAACGTATCGGCAAA
TCGGTCATGCCCTCCAGTGTGCCTACGTCTTCCTGTCCGACATTGGGGTCGATCTGGCCA
AAACGCTACTCTCGAATGTGGCTCTTGGTCGTGGATGTTCCCTTGCGCAGGATGTAGCCT
TCTGTGATGATCGCTATAATACGGTGAAGCTGGTACGACCAATACGCGATCTCAATCCGG
ACGAGGTTAGCAATTATTTACAGTACAGCGAGCAACCATTGCTGTCCTACTCGCCCGCCA
AACACTTCGAGGATAAGCCAAGCTTGCAGAATTTGACCGCCAAGTTTATCGACAATCTGA
TGCAAAGCTTCCCGTCGACGGTATCGACCGTGTACCGAACCGGTGATAAATTGGACGCAC
CGAAAGCAGCACGAAACGGTCCCACCGTCGGCGATGGGTTATCGGAAAGGCAAGACGAAA
GCGAGGATTTTCTTGCCCTGTTTGACAGAACGCTCACATTGGACGATCGGCCGTCGGGAG
AGTGTTGCCGTTTCTGCGGTGTTGCCTTAGACTATCGAGGATCGAAAACGCTGTTTGCTA
CCGAATATTCGCGCCTCGTTTCGTCCCGGATTAATGCCGCCTGCAGCCATGAGGATATTT
TGCTAAAGTCCAAGCAAATGGAATTGGATGCGGAACGTGCGGTAAACGGTGAAGATGACC
AGGGTGAAGAGCGCGTGCTCATGAAACAGCTTTGCCATGGGTGTAGGAATATTTTTGAAG
ATTTAAATAAATAAATATGAGATGATCATATAATAAACGCACTATGTTGTGGAAAAGAGA
GAAA
clustalw multiple alignements is not computed in this case